RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SLF2Q8IX21 1173 aa15.53■□□□□ 0.08
COPS7A-221ENST00000546229 UNC93B1Q9H1C4 597 aa15.53■□□□□ 0.08
COPS7A-221ENST00000546229 FLT3LGP49771 235 aa15.52■□□□□ 0.08
COPS7A-221ENST00000546229 JAG1P78504 1218 aa15.52■□□□□ 0.08
COPS7A-221ENST00000546229 ADGRA1Q86SQ6 560 aa15.52■□□□□ 0.08
COPS7A-221ENST00000546229 METTL16Q86W50 562 aaKnown RBP15.52■□□□□ 0.08
COPS7A-221ENST00000546229 ZSCAN29Q8IWY8 852 aaPredicted RBP15.52■□□□□ 0.08
COPS7A-221ENST00000546229 PROCA1Q8NCQ7 364 aaPredicted RBP15.52■□□□□ 0.08
COPS7A-221ENST00000546229 U2AF1L4Q8WU68 220 aaKnown RBP15.52■□□□□ 0.08
COPS7A-221ENST00000546229 PAK6Q9NQU5 681 aaPredicted RBP15.52■□□□□ 0.08
COPS7A-221ENST00000546229 COL6A3P12111 3177 aa15.52■□□□□ 0.07
COPS7A-221ENST00000546229 GNAI2P04899 355 aa15.51■□□□□ 0.07
COPS7A-221ENST00000546229 INHAP05111 366 aa15.51■□□□□ 0.07
COPS7A-221ENST00000546229 ELNP15502 786 aa15.51■□□□□ 0.07
COPS7A-221ENST00000546229 FAM110CQ1W6H9 321 aa15.51■□□□□ 0.07
COPS7A-221ENST00000546229 SH3D19Q5HYK7 790 aa15.51■□□□□ 0.07
COPS7A-221ENST00000546229 PXYLP1Q8TE99 480 aa15.51■□□□□ 0.07
COPS7A-221ENST00000546229 SH3RF3Q8TEJ3 882 aaPredicted RBP15.51■□□□□ 0.07
COPS7A-221ENST00000546229 ADCY3O60266 1144 aa15.5■□□□□ 0.07
COPS7A-221ENST00000546229 CAP2P40123 477 aa15.5■□□□□ 0.07
COPS7A-221ENST00000546229 SHROOM1Q2M3G4 852 aaPredicted RBP15.5■□□□□ 0.07
COPS7A-221ENST00000546229 TMEM57Q8N5G2 664 aa15.5■□□□□ 0.07
COPS7A-221ENST00000546229 NKX2-3Q8TAU0 364 aa15.5■□□□□ 0.07
COPS7A-221ENST00000546229 SSH3Q8TE77 659 aa15.5■□□□□ 0.07
COPS7A-221ENST00000546229 CRISPLD2Q9H0B8 497 aa15.5■□□□□ 0.07
COPS7A-221ENST00000546229 RNF208Q9H0X6 261 aa15.5■□□□□ 0.07
COPS7A-221ENST00000546229 GPR108Q9NPR9 543 aa15.5■□□□□ 0.07
COPS7A-221ENST00000546229 CYP2E1P05181 493 aaPredicted RBP15.49■□□□□ 0.07
COPS7A-221ENST00000546229 ANKRD13CQ8N6S4 541 aa15.49■□□□□ 0.07
COPS7A-221ENST00000546229 ZNF280CQ8ND82 737 aa15.49■□□□□ 0.07
COPS7A-221ENST00000546229 NEUROD6Q96NK8 337 aa15.49■□□□□ 0.07
COPS7A-221ENST00000546229 DBNDD2Q9BQY9 259 aa15.49■□□□□ 0.07
COPS7A-221ENST00000546229 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.49■□□□□ 0.07
COPS7A-221ENST00000546229 FLT1P17948 1338 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 TNPO2O14787 897 aaKnown RBP15.48■□□□□ 0.07
COPS7A-221ENST00000546229 FARP2O94887 1054 aaPredicted RBP15.48■□□□□ 0.07
COPS7A-221ENST00000546229 SGPL1O95470 568 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 HMGCS2P54868 508 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 PPP4CP60510 307 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 UBXN2AP68543 259 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 GSTO1P78417 241 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 SPP2Q13103 211 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 TNNI3KQ59H18 835 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 POTEEQ6S8J3 1075 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 TEX11Q8IYF3 940 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
COPS7A-221ENST00000546229 CLUAP1Q96AJ1 413 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 ZNF512BQ96KM6 892 aaPredicted RBP15.48■□□□□ 0.07
COPS7A-221ENST00000546229 TBC1D2Q9BYX2 928 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 RBM27Q9P2N5 1060 aaKnown RBP15.48■□□□□ 0.07
COPS7A-221ENST00000546229 MORF4L1Q9UBU8 362 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 HERC5Q9UII4 1024 aaKnown RBP15.48■□□□□ 0.07
COPS7A-221ENST00000546229 GJD2Q9UKL4 321 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 FPGT-TNNI3KV9GXZ4 949 aa15.48■□□□□ 0.07
COPS7A-221ENST00000546229 LDHCP07864 332 aa15.47■□□□□ 0.07
COPS7A-221ENST00000546229 UQCRFS1P1P0C7P4 283 aa15.47■□□□□ 0.07
COPS7A-221ENST00000546229 MNX1P50219 401 aaPredicted RBP15.47■□□□□ 0.07
COPS7A-221ENST00000546229 WDR18Q9BV38 432 aa15.47■□□□□ 0.07
COPS7A-221ENST00000546229 ASCC2Q9H1I8 757 aaPredicted RBP15.47■□□□□ 0.07
COPS7A-221ENST00000546229 TLR7Q9NYK1 1049 aaKnown RBP15.47■□□□□ 0.07
COPS7A-221ENST00000546229 RAI14Q9P0K7 980 aa15.47■□□□□ 0.07
COPS7A-221ENST00000546229 DNAH12Q6ZR08 3092 aa15.46■□□□□ 0.07
COPS7A-221ENST00000546229 FRMPD3Q5JV73 1810 aa15.46■□□□□ 0.07
COPS7A-221ENST00000546229 ZBTB7BO15156 539 aaPredicted RBP15.46■□□□□ 0.07
COPS7A-221ENST00000546229 IPO8O15397 1037 aaKnown RBP15.46■□□□□ 0.07
COPS7A-221ENST00000546229 RLBP1P12271 317 aa15.46■□□□□ 0.07
COPS7A-221ENST00000546229 PIH1D3Q9NQM4 214 aaKnown RBP15.46■□□□□ 0.07
COPS7A-221ENST00000546229 SNRKQ9NRH2 765 aa15.46■□□□□ 0.07
COPS7A-221ENST00000546229 AATFQ9NY61 560 aaKnown RBP eCLIP15.46■□□□□ 0.07
COPS7A-221ENST00000546229 DBNLQ9UJU6 430 aaKnown RBP15.46■□□□□ 0.07
COPS7A-221ENST00000546229 PNMA3Q9UL41 463 aa15.46■□□□□ 0.07
COPS7A-221ENST00000546229 NOP58Q9Y2X3 529 aaKnown RBP15.46■□□□□ 0.07
COPS7A-221ENST00000546229 MYH1P12882 1939 aa15.46■□□□□ 0.07
COPS7A-221ENST00000546229 USP17L5A8MUK1 530 aa15.45■□□□□ 0.06
COPS7A-221ENST00000546229 GCLCP48506 637 aaPredicted RBP15.45■□□□□ 0.06
COPS7A-221ENST00000546229 FRAT1Q92837 279 aaPredicted RBP15.45■□□□□ 0.06
COPS7A-221ENST00000546229 TXNRD2Q9NNW7 524 aa15.45■□□□□ 0.06
COPS7A-221ENST00000546229 PEX10O60683 326 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 HOXA7P31268 230 aaPredicted RBP15.44■□□□□ 0.06
COPS7A-221ENST00000546229 ZAP70P43403 619 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 ATP8B2P98198 1209 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 TRIM32Q13049 653 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 G3BP1Q13283 466 aaKnown RBP eCLIP15.44■□□□□ 0.06
COPS7A-221ENST00000546229 MTMR2Q13614 643 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 MAP3K21Q5TCX8 1036 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 NAA16Q6N069 864 aaPredicted RBP15.44■□□□□ 0.06
COPS7A-221ENST00000546229 DIS3LQ8TF46 1054 aaKnown RBP15.44■□□□□ 0.06
COPS7A-221ENST00000546229 DEFB118Q96PH6 123 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 DHX36Q9H2U1 1008 aaKnown RBP15.44■□□□□ 0.06
COPS7A-221ENST00000546229 C1orf115Q9H7X2 142 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 LRP2BPQ9P2M1 347 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 PI4KBQ9UBF8 816 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 BIN2Q9UBW5 565 aaPredicted RBP15.44■□□□□ 0.06
COPS7A-221ENST00000546229 LAMA2P24043 3122 aaKnown RBP15.44■□□□□ 0.06
COPS7A-221ENST00000546229 NAV1Q8NEY1 1877 aa15.44■□□□□ 0.06
COPS7A-221ENST00000546229 A0A0G2JMZ2 1700 aa15.43■□□□□ 0.06
COPS7A-221ENST00000546229 IGSF3O75054 1194 aa15.43■□□□□ 0.06
COPS7A-221ENST00000546229 BACE1P56817 501 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms