RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	SAR1B	Q9Y6B6	198 aa		11.5	□□□□□ -0.57
UBC-213	ENST00000546120	CCDC189	A1A4V9	331 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	FANCG	O15287	622 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	MFAP3L	O75121	409 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	BMP15	O95972	392 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	ATP1A3	P13637	1013 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	FNTA	P49354	379 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	SARS	P49591	514 aa	Known RBP	11.49	□□□□□ -0.57
UBC-213	ENST00000546120	AMPD2	Q01433	879 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	CEBPZ	Q03701	1054 aa	Known RBP	11.49	□□□□□ -0.57
UBC-213	ENST00000546120	PPP4R3A	Q6IN85	833 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.49	□□□□□ -0.57
UBC-213	ENST00000546120	KSR2	Q6VAB6	950 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	TRAPPC11	Q7Z392	1133 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	EGFL6	Q8IUX8	553 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	CD302	Q8IX05	232 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	MMGT1	Q8N4V1	131 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	CAVIN3	Q969G5	261 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	HOOK2	Q96ED9	719 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
UBC-213	ENST00000546120	TRIM6	Q9C030	488 aa	Predicted RBP	11.49	□□□□□ -0.57
UBC-213	ENST00000546120	TMX4	Q9H1E5	349 aa	Predicted RBP	11.49	□□□□□ -0.57
UBC-213	ENST00000546120	ATP6V0A4	Q9HBG4	840 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	GPR108	Q9NPR9	543 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	ODF2L	Q9ULJ1	636 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	PALLD	Q8WX93	1383 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120	AKAP12	Q02952	1782 aa		11.49	□□□□□ -0.57
UBC-213	ENST00000546120		A0A0D9SFI3	127 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	NDUFAB1	O14561	156 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	CPLX1	O14810	134 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	LIN7A	O14910	233 aa	Predicted RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	KRT86	O43790	486 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	HSF2BP	O75031	334 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	IPO7	O95373	1038 aa	Known RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	CTDNEP1	O95476	244 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	ZFY	P08048	801 aa	Predicted RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	PBX1	P40424	430 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	CCT5	P48643	541 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	LIG3	P49916	1009 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	EPHB4	P54760	987 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	SARNP	P82979	210 aa	Known RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	ACTN3	Q08043	901 aa	Predicted RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	MORC3	Q14149	939 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	SNCB	Q16143	134 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	KIAA0753	Q2KHM9	967 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	CCDC38	Q502W7	563 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	ISM2	Q6H9L7	571 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	ILDR1	Q86SU0	546 aa	Predicted RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	FAM177A1	Q8N128	213 aa	Predicted RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	MAB21L3	Q8N8X9	362 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	KRI1	Q8N9T8	703 aa	Known RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	RETREG2	Q8NC44	543 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	SPATA20	Q8TB22	786 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	RSRC1	Q96IZ7	334 aa	Known RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	FAM210A	Q96ND0	272 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	HAUS7	Q99871	368 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	EPN3	Q9H201	632 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	PHAX	Q9H814	394 aa	Known RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	VCPKMT	Q9H867	229 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	COPRS	Q9NQ92	184 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	KLC4	Q9NSK0	619 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	PUF60	Q9UHX1	559 aa	Known RBP	11.48	□□□□□ -0.57
UBC-213	ENST00000546120	KCNH3	Q9ULD8	1083 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	TBC1D2B	Q9UPU7	963 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	NFE2L3	Q9Y4A8	694 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	MYH15	Q9Y2K3	1946 aa		11.48	□□□□□ -0.57
UBC-213	ENST00000546120	KLHL33	A6NCF5	533 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	SASH1	O94885	1247 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	CYP21A2	P08686	494 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	HOXA7	P31268	230 aa	Predicted RBP	11.47	□□□□□ -0.57
UBC-213	ENST00000546120	KIF23	Q02241	960 aa	Predicted RBP	11.47	□□□□□ -0.57
UBC-213	ENST00000546120	TRIM29	Q14134	588 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	IMMT	Q16891	758 aa	Known RBP	11.47	□□□□□ -0.57
UBC-213	ENST00000546120	CEP85L	Q5SZL2	805 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	KDM7A	Q6ZMT4	941 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	IQCA1	Q86XH1	822 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	CCDC170	Q8IYT3	715 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	KBTBD3	Q8NAB2	608 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	ARMC2	Q8NEN0	867 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	GSDMA	Q96QA5	445 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	SH3GL3	Q99963	347 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	NBPF3	Q9H094	633 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	TSKS	Q9UJT2	592 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	CAPN7	Q9Y6W3	813 aa		11.47	□□□□□ -0.57
UBC-213	ENST00000546120	STRC	Q7RTU9	1775 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	NALCN	Q8IZF0	1738 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	TMEM94	Q12767	1356 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	MAP3K19	Q56UN5	1328 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.46	□□□□□ -0.57
UBC-213	ENST00000546120	N4BP1	O75113	896 aa	Known RBP	11.46	□□□□□ -0.57
UBC-213	ENST00000546120	RASSF9	O75901	435 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	MYCN	P04198	464 aa	Predicted RBP	11.46	□□□□□ -0.57
UBC-213	ENST00000546120	RHOXF2B	P0C7M4	288 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	GHR	P10912	638 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	MDM2	Q00987	491 aa	Predicted RBP	11.46	□□□□□ -0.57
UBC-213	ENST00000546120	POSTN	Q15063	836 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	CCDC40	Q4G0X9	1142 aa		11.46	□□□□□ -0.57
UBC-213	ENST00000546120	FOXR1	Q6PIV2	292 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms