RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 EXOSC10Q01780 885 aaKnown RBP6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 TRDNQ13061 729 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 SKOR2Q2VWA4 1001 aaPredicted RBP6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 TTLL5Q6EMB2 1281 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 NAA16Q6N069 864 aaPredicted RBP6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 GIMAP6Q6P9H5 292 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 Q6ZUG5 572 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 METTL3Q86U44 580 aaKnown RBP6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 CERS3Q8IU89 383 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 MB21D2Q8IYB1 491 aaPredicted RBP6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 LCORLQ8N3X6 602 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 WDR66Q8TBY9 1149 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 PXYLP1Q8TE99 480 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 STAG1Q8WVM7 1258 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 CAMKK2Q96RR4 588 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 LLPHQ9BRT6 129 aaKnown RBP6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 NAPBQ9H115 298 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 CNNM2Q9H8M5 875 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 EPB41L4AQ9HCS5 686 aaPredicted RBP6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 STK32BQ9NY57 414 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 RAI14Q9P0K7 980 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 ABCF2Q9UG63 623 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 ZDHHC9Q9Y397 364 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 KIF3AQ9Y496 699 aa6.44□□□□□ -1.38
NPIPB3-214ENST00000545358 EP400Q96L91 3159 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 NAV1Q8NEY1 1877 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 DDX60LQ5H9U9 1706 aaKnown RBP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 MAGEB6P1A0A0J9YX57 407 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 GSG1L2A8MUP6 293 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 PRC1O43663 620 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 STX6O43752 255 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 PFKFB2O60825 505 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 APPP05067 770 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 MMP10P09238 476 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 SRGNP10124 158 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 PCP11498 1178 aaKnown RBP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 GJB2P29033 226 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 ALDH1B1P30837 517 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 BAG6P46379 1132 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 TDO2P48775 406 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 NT5C2P49902 561 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 EVCP57679 992 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 HAND2P61296 217 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 GPSM2P81274 684 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 HMGN5P82970 282 aaKnown RBP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 PKP1Q13835 747 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 COL9A3Q14050 684 aaPredicted RBP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 SLC15A2Q16348 729 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 TBC1D10CQ8IV04 446 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 SP8Q8IXZ3 490 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 IFNL3Q8IZI9 196 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 TDRD7Q8NHU6 1098 aaKnown RBP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 BRF1Q92994 677 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 NSUN4Q96CB9 384 aaKnown RBP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 ZNF274Q96GC6 653 aaPredicted RBP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 TMEM87BQ96K49 555 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 TCEANC2Q96MN5 208 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 RIOK1Q9BRS2 568 aaKnown RBP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 MTA3Q9BTC8 594 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 RNF41Q9H4P4 317 aaPredicted RBP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 ARMT1Q9H993 441 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 IQSEC3Q9UPP2 1182 aaPredicted RBP6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 ATP6V0A2Q9Y487 856 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 ATP6V1DQ9Y5K8 247 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 SLC4A4Q9Y6R1 1079 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 NID2Q14112 1375 aa6.43□□□□□ -1.38
NPIPB3-214ENST00000545358 C10orf71Q711Q0 1435 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 A0A0G2JLW4 131 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 WTIPA6NIX2 430 aaPredicted RBP6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 ZSCAN22P10073 491 aaPredicted RBP6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 IL1R1P14778 569 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 SYT1P21579 422 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 PRDX5P30044 214 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 ANTXR2P58335 489 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 GSTO1P78417 241 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 MECOMQ03112 1051 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 KCNC4Q03721 635 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 CHAF1AQ13111 956 aaPredicted RBP6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 MAP2K5Q13163 448 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 SF3B2Q13435 895 aaKnown RBP6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 EZH2Q15910 746 aaKnown RBP6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 AKNAD1Q5T1N1 836 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 STYK1Q6J9G0 422 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 DZIP1Q86YF9 867 aaKnown RBP6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 MIGA1Q8NAN2 632 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 TBC1D22AQ8WUA7 517 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 MASTLQ96GX5 879 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 CRNKL1Q9BZJ0 848 aaKnown RBP6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 KRT23Q9C075 422 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 ANAPC4Q9UJX5 808 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 ANGEL1Q9UNK9 670 aaKnown RBP6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 NEDD4P46934 1319 aa6.42□□□□□ -1.38
NPIPB3-214ENST00000545358 GOLGA8BA8MQT2 603 aa6.41□□□□□ -1.38
NPIPB3-214ENST00000545358 SH2B2O14492 632 aaPredicted RBP6.41□□□□□ -1.38
NPIPB3-214ENST00000545358 DHX16O60231 1041 aaKnown RBP6.41□□□□□ -1.38
NPIPB3-214ENST00000545358 TRAK2O60296 914 aa6.41□□□□□ -1.38
NPIPB3-214ENST00000545358 F13A1P00488 732 aa6.41□□□□□ -1.38
NPIPB3-214ENST00000545358 LDHBP07195 334 aaKnown RBP6.41□□□□□ -1.38
NPIPB3-214ENST00000545358 RCAN1P53805 252 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms