RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 GRM1Q13255 1194 aa9.06□□□□□ -0.96
CPSF7-224ENST00000544990 TNFAIP1Q13829 316 aa9.06□□□□□ -0.96
CPSF7-224ENST00000544990 HSP90AB4PQ58FF6 505 aa9.06□□□□□ -0.96
CPSF7-224ENST00000544990 CYP4F22Q6NT55 531 aa9.06□□□□□ -0.96
CPSF7-224ENST00000544990 BANK1Q8NDB2 785 aa9.06□□□□□ -0.96
CPSF7-224ENST00000544990 DEFB129Q9H1M3 183 aa9.06□□□□□ -0.96
CPSF7-224ENST00000544990 VEZTQ9HBM0 779 aa9.06□□□□□ -0.96
CPSF7-224ENST00000544990 ZBTB40Q9NUA8 1239 aa9.06□□□□□ -0.96
CPSF7-224ENST00000544990 SCAF8Q9UPN6 1271 aaKnown RBP9.06□□□□□ -0.96
CPSF7-224ENST00000544990 COL1A1P02452 1464 aaPredicted RBP9.06□□□□□ -0.96
CPSF7-224ENST00000544990 SALL1Q9NSC2 1324 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 CLRN2A0PK11 232 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 LDHBP07195 334 aaKnown RBP9.05□□□□□ -0.96
CPSF7-224ENST00000544990 UQCRFS1P1P0C7P4 283 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 NDUFV2P19404 249 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 MAP2K2P36507 400 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 TNNI2P48788 182 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 MAP2K1Q02750 393 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-224ENST00000544990 TNNI3KQ59H18 835 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 CCDC158Q5M9N0 1113 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 PRAMEF18Q5VWM3 479 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 SPTY2D1Q68D10 685 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-224ENST00000544990 RGMBQ6NW40 437 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 HHIPL2Q6UWX4 724 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 ARMC9Q7Z3E5 817 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 ERC1Q8IUD2 1116 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 AIDAQ96BJ3 306 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 TDRD3Q9H7E2 651 aaKnown RBP9.05□□□□□ -0.96
CPSF7-224ENST00000544990 TMOD2Q9NZR1 351 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 ZNF70Q9UC06 446 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-224ENST00000544990 PCDHAC2Q9Y5I4 1007 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 FPGT-TNNI3KV9GXZ4 949 aa9.05□□□□□ -0.96
CPSF7-224ENST00000544990 PDS5AQ29RF7 1337 aaKnown RBP9.05□□□□□ -0.96
CPSF7-224ENST00000544990 PAPPA2Q9BXP8 1791 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 PPP1R12BO60237 982 aaPredicted RBP9.04□□□□□ -0.96
CPSF7-224ENST00000544990 SLC10A3P09131 477 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 HSPA1AP0DMV8 641 aaKnown RBP9.04□□□□□ -0.96
CPSF7-224ENST00000544990 HSPA1BP0DMV9 641 aaKnown RBP9.04□□□□□ -0.96
CPSF7-224ENST00000544990 FDX1P10109 184 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 ZNF157P51786 506 aaPredicted RBP9.04□□□□□ -0.96
CPSF7-224ENST00000544990 RASGRF1Q13972 1273 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 GRIK5Q16478 980 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 SUPT20HL1Q3ZLR7 823 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 TTC39AQ5SRH9 613 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 PPP2R2DQ66LE6 453 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 LRCH3Q96II8 777 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 ZFRQ96KR1 1074 aaKnown RBP9.04□□□□□ -0.96
CPSF7-224ENST00000544990 ZDHHC15Q96MV8 337 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 ABCF2Q9UG63 623 aa9.04□□□□□ -0.96
CPSF7-224ENST00000544990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.04□□□□□ -0.96
CPSF7-224ENST00000544990 BHMG1C9JSJ3 638 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-224ENST00000544990 APBB1O00213 710 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 ARID4AP29374 1257 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-224ENST00000544990 PRDX5P30044 214 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 LSM11P83369 360 aaKnown RBP eCLIP9.03□□□□□ -0.96
CPSF7-224ENST00000544990 NOGQ13253 232 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 MCM6Q14566 821 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 RASA3Q14644 834 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 C20orf194Q5TEA3 1177 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 PRPF38BQ5VTL8 546 aaKnown RBP9.03□□□□□ -0.96
CPSF7-224ENST00000544990 ADGRD1Q6QNK2 874 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 SPATA5Q8NB90 893 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 PRM3Q9NNZ6 103 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 EXOC6BQ9Y2D4 811 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
CPSF7-224ENST00000544990 SPDYE5A6NIY4 337 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 TCP10L2B9ZVM9 353 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 UBE2Q2LH0YL09 131 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 HOXA2O43364 376 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 AOC2O75106 756 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 RAB11FIP3O75154 756 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 CFHP08603 1231 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 PRKG1Q13976 671 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 FKBP1CQ5VVH2 108 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 APOBEC3HQ6NTF7 200 aaKnown RBP9.02□□□□□ -0.97
CPSF7-224ENST00000544990 DZIP1Q86YF9 867 aaKnown RBP9.02□□□□□ -0.97
CPSF7-224ENST00000544990 KIF1BPQ96EK5 621 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 DBNDD2Q9BQY9 259 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 WBP1LQ9NX94 342 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-224ENST00000544990 HMG20BQ9P0W2 317 aa9.02□□□□□ -0.97
CPSF7-224ENST00000544990 ANGEL1Q9UNK9 670 aaKnown RBP9.02□□□□□ -0.97
CPSF7-224ENST00000544990 AK9Q5TCS8 1911 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 UNCXA6NJT0 531 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 LDHCP07864 332 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 MCAMP43121 646 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 IREB2P48200 963 aaKnown RBP9.01□□□□□ -0.97
CPSF7-224ENST00000544990 RRP1P56182 461 aaKnown RBP9.01□□□□□ -0.97
CPSF7-224ENST00000544990 GSTO1P78417 241 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 MAP3K11Q16584 847 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 NBPF12Q5TAG4 269 aaPredicted RBP9.01□□□□□ -0.97
CPSF7-224ENST00000544990 FAM83AQ86UY5 434 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 AACSQ86V21 672 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 CLASRPQ8N2M8 674 aaKnown RBP9.01□□□□□ -0.97
CPSF7-224ENST00000544990 ANKK1Q8NFD2 765 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 RHPN1Q8TCX5 695 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 EAF2Q96CJ1 260 aaPredicted RBP9.01□□□□□ -0.97
CPSF7-224ENST00000544990 HOOK2Q96ED9 719 aa9.01□□□□□ -0.97
CPSF7-224ENST00000544990 ZNF512BQ96KM6 892 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms