RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 DDX4Q9NQI0 724 aaKnown RBP13.35□□□□□ -0.27
TNC-213ENST00000544972 SAP30BPQ9UHR5 308 aaKnown RBP13.35□□□□□ -0.27
TNC-213ENST00000544972 NAP1L2Q9ULW6 460 aaPredicted RBP13.35□□□□□ -0.27
TNC-213ENST00000544972 GOLGA8BA8MQT2 603 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 STX6O43752 255 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 RANBP6O60518 1105 aaKnown RBP13.34□□□□□ -0.27
TNC-213ENST00000544972 SLC3A2P08195 630 aaKnown RBP13.34□□□□□ -0.27
TNC-213ENST00000544972 VIL1P09327 827 aaKnown RBP13.34□□□□□ -0.27
TNC-213ENST00000544972 MCM4P33991 863 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 SEC23AQ15436 765 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 RAB11FIP4Q86YS3 637 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 TAOK3Q9H2K8 898 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 SERPINA10Q9UK55 444 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 BCS1LQ9Y276 419 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 PSMD14O00487 310 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 RAD17O75943 681 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
TNC-213ENST00000544972 PDE4BQ07343 736 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 FOXD4L5Q5VV16 416 aaPredicted RBP13.34□□□□□ -0.27
TNC-213ENST00000544972 RSBN1LQ6PCB5 846 aaPredicted RBP13.34□□□□□ -0.27
TNC-213ENST00000544972 FOXD4L4Q8WXT5 416 aaPredicted RBP13.34□□□□□ -0.27
TNC-213ENST00000544972 GMLQ99445 158 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 SPON1Q9HCB6 807 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 ZNRF3Q9ULT6 936 aa13.34□□□□□ -0.27
TNC-213ENST00000544972 ARFGEF1Q9Y6D6 1849 aa13.33□□□□□ -0.27
TNC-213ENST00000544972 TNKSO95271 1327 aa13.33□□□□□ -0.28
TNC-213ENST00000544972 WDR33Q9C0J8 1336 aaKnown RBP13.33□□□□□ -0.28
TNC-213ENST00000544972 BAG4O95429 457 aaKnown RBP13.33□□□□□ -0.28
TNC-213ENST00000544972 WTAPQ15007 396 aa13.33□□□□□ -0.28
TNC-213ENST00000544972 SART3Q15020 963 aaKnown RBP13.33□□□□□ -0.28
TNC-213ENST00000544972 AMOTL1Q8IY63 956 aa13.33□□□□□ -0.28
TNC-213ENST00000544972 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.28
TNC-213ENST00000544972 ZSCAN10Q96SZ4 725 aaPredicted RBP13.33□□□□□ -0.28
TNC-213ENST00000544972 UBAC1Q9BSL1 405 aa13.33□□□□□ -0.28
TNC-213ENST00000544972 MTMR6Q9Y217 621 aa13.33□□□□□ -0.28
TNC-213ENST00000544972 MYO3BQ8WXR4 1341 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 PTPDC1A2A3K4 754 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 NFIAQ12857 509 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 PICALMQ13492 652 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 LARP1BQ659C4 914 aaKnown RBP13.32□□□□□ -0.28
TNC-213ENST00000544972 NIM1KQ8IY84 436 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 SLC44A5Q8NCS7 719 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 DDX11Q96FC9 970 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 FAM217BQ9NTX9 383 aaPredicted RBP13.32□□□□□ -0.28
TNC-213ENST00000544972 ERICH2A1L162 156 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 ZBTB43O43298 467 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 ZSCAN22P10073 491 aaPredicted RBP13.32□□□□□ -0.28
TNC-213ENST00000544972 FDPSP14324 419 aaKnown RBP13.32□□□□□ -0.28
TNC-213ENST00000544972 RXRAP19793 462 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 CDC27P30260 824 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 PRELPP51888 382 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 NFXL1Q6ZNB6 911 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 C16orf86Q6ZW13 317 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 MICU3Q86XE3 530 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 IQCA1Q86XH1 822 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 TMTC2Q8N394 836 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 CHAMP1Q96JM3 812 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 SLC12A7Q9Y666 1083 aa13.32□□□□□ -0.28
TNC-213ENST00000544972 NID2Q14112 1375 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 LTBP3Q9NS15 1303 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 CCDC69A6NI79 296 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 NMT2O60551 498 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 PPFIA3O75145 1194 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 RASA1P20936 1047 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 ADD1P35611 737 aaKnown RBP13.31□□□□□ -0.28
TNC-213ENST00000544972 CDK8P49336 464 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 NT5C2P49902 561 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 METAP2P50579 478 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNC-213ENST00000544972 RBM5P52756 815 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNC-213ENST00000544972 HMGN5P82970 282 aaKnown RBP13.31□□□□□ -0.28
TNC-213ENST00000544972 CXCL9Q07325 125 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 ILDR2Q71H61 639 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 CHMP4CQ96CF2 233 aa13.31□□□□□ -0.28
TNC-213ENST00000544972 OSBPL5Q9H0X9 879 aaPredicted RBP13.31□□□□□ -0.28
TNC-213ENST00000544972 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
TNC-213ENST00000544972 TSPY2A6NKD2 308 aa13.3□□□□□ -0.28
TNC-213ENST00000544972 DHX16O60231 1041 aaKnown RBP13.3□□□□□ -0.28
TNC-213ENST00000544972 PDCP20941 246 aa13.3□□□□□ -0.28
TNC-213ENST00000544972 GABPAQ06546 454 aa13.3□□□□□ -0.28
TNC-213ENST00000544972 NTRK3Q16288 839 aa13.3□□□□□ -0.28
TNC-213ENST00000544972 CFAP100Q494V2 611 aa13.3□□□□□ -0.28
TNC-213ENST00000544972 ZFPM1Q8IX07 1006 aa13.3□□□□□ -0.28
TNC-213ENST00000544972 ZNF654Q8IZM8 581 aa13.3□□□□□ -0.28
TNC-213ENST00000544972 PRMT6Q96LA8 375 aaPredicted RBP13.3□□□□□ -0.28
TNC-213ENST00000544972 IDI2Q9BXS1 227 aa13.3□□□□□ -0.28
TNC-213ENST00000544972 IL17RBQ9NRM6 502 aa13.3□□□□□ -0.28
TNC-213ENST00000544972 F13A1P00488 732 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 PDIA4P13667 645 aaKnown RBP13.29□□□□□ -0.28
TNC-213ENST00000544972 RCAN1P53805 252 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 CACNB3P54284 484 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 TFAP4Q01664 338 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 RASSF7Q02833 373 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 RCSD1Q6JBY9 416 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 CCDC144CPQ8IYA2 1237 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 MKNK2Q9HBH9 465 aa13.29□□□□□ -0.28
TNC-213ENST00000544972 FAM198AQ9UFP1 575 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms