RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 COL2A1P02458 1487 aaPredicted RBP8.28□□□□□ -1.08
HMGCS2-204ENST00000544913 GREB1LQ9C091 1923 aaPredicted RBP8.27□□□□□ -1.08
HMGCS2-204ENST00000544913 WDR19Q8NEZ3 1342 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 B4E1Z4 1266 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 ORC4O43929 436 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 EVCP57679 992 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 TNIP1Q15025 636 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 SPDYE2Q495Y8 402 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 C9orf131Q5VYM1 1079 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 BLOC1S2Q6QNY1 142 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 DHX32Q7L7V1 743 aaKnown RBP8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 CDAN1Q8IWY9 1227 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 SLC44A5Q8NCS7 719 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 DPF2Q92785 391 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 DYNLL2Q96FJ2 89 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 INTS4Q96HW7 963 aaKnown RBP8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 LARP6Q9BRS8 491 aaKnown RBP8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 LRRC2Q9BYS8 371 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 OSBPL5Q9H0X9 879 aaPredicted RBP8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 SAP30BPQ9UHR5 308 aaKnown RBP8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 TPCN1Q9ULQ1 816 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 CYP46A1Q9Y6A2 500 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 DDTLA6NHG4 134 aaPredicted RBP8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 WNT10BO00744 389 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 SLC4A8Q2Y0W8 1093 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 NBPF9Q3BBW0 867 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 CHST3Q7LGC8 479 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 METTL16Q86W50 562 aaKnown RBP8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 MICALL2Q8IY33 904 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 GPC2Q8N158 579 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 TMX3Q96JJ7 454 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 MYOZ2Q9NPC6 264 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 PDRG1Q9NUG6 133 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 RNF181Q9P0P0 153 aa8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 ZNF70Q9UC06 446 aaPredicted RBP8.27□□□□□ -1.09
HMGCS2-204ENST00000544913 MINDY4BA8MYZ0 360 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 PRDM1O75626 825 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 PDIA4P13667 645 aaKnown RBP8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 PSMA5P28066 241 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 USP5P45974 858 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 CUL4AQ13619 759 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 SEC23AQ15436 765 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 C16orf86Q6ZW13 317 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 NCOA7Q8NI08 942 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 TRPM4Q8TD43 1214 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 IGDCC4Q8TDY8 1250 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 NOL10Q9BSC4 688 aaKnown RBP8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 GPRC5DQ9NZD1 345 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 ZSWIM5Q9P217 1185 aa8.26□□□□□ -1.09
HMGCS2-204ENST00000544913 CLRN2A0PK11 232 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 GOLGA6L3A6NEY3 463 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 SH2B2O14492 632 aaPredicted RBP8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 PRC1O43663 620 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 KDM4AO75164 1064 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 DDNO94850 711 aaPredicted RBP8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 HMGB1P09429 215 aaKnown RBP8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 RASA1P20936 1047 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 HIRAP54198 1017 aaPredicted RBP8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 EIF6P56537 245 aaKnown RBP8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 PICALMQ13492 652 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 DLGAP5Q15398 846 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 ME3Q16798 604 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 FKBP1CQ5VVH2 108 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 Q6ZUG5 572 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 SAMD7Q7Z3H4 446 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 STK11IPQ8N1F8 1099 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 BRPF3Q9ULD4 1205 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 HPS5Q9UPZ3 1129 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 GJA3Q9Y6H8 435 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 PLIN4Q96Q06 1357 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 ENTPD3O75355 529 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 PCP11498 1178 aaKnown RBP8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 SHMT1P34896 483 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 EPS15P42566 896 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 MRE11P49959 708 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 MMP14P50281 582 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 RCSD1Q6JBY9 416 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 MFSD6Q6ZSS7 791 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 NOL8Q76FK4 1167 aaKnown RBP8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 BRF1Q92994 677 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 L3MBTL3Q96JM7 780 aaPredicted RBP8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 TEPSINQ96N21 525 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 EHD4Q9H223 541 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 LY9Q9HBG7 655 aa8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 CNOT7Q9UIV1 285 aaKnown RBP8.25□□□□□ -1.09
HMGCS2-204ENST00000544913 POTECB2RU33 542 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 NMT2O60551 498 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 DTNBO60941 627 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 MCM5P33992 734 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 NOVP48745 357 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 RBM5P52756 815 aaKnown RBP eCLIP8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 JAG1P78504 1218 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 RRP1BQ14684 758 aaKnown RBP8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 GPR162Q16538 588 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 SHROOM1Q2M3G4 852 aaPredicted RBP8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 TBC1D10BQ4KMP7 808 aaPredicted RBP8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 CNNM2Q9H8M5 875 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 IL17RBQ9NRM6 502 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms