RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 ZNF335Q9H4Z2 1342 aaPredicted RBP14.95□□□□□ -0.02
CPSF7-223ENST00000544669 RANBP6O60518 1105 aaKnown RBP14.95□□□□□ -0.02
CPSF7-223ENST00000544669 ERCC5P28715 1186 aaPredicted RBP14.95□□□□□ -0.02
CPSF7-223ENST00000544669 PPARAQ07869 468 aa14.95□□□□□ -0.02
CPSF7-223ENST00000544669 ENOX1Q8TC92 643 aaKnown RBP14.95□□□□□ -0.02
CPSF7-223ENST00000544669 ZNF592Q92610 1267 aa14.95□□□□□ -0.02
CPSF7-223ENST00000544669 SMARCE1Q969G3 411 aa14.95□□□□□ -0.02
CPSF7-223ENST00000544669 FERMT2Q96AC1 680 aa14.95□□□□□ -0.02
CPSF7-223ENST00000544669 BRIP1Q9BX63 1249 aa14.95□□□□□ -0.02
CPSF7-223ENST00000544669 OGFRQ9NZT2 677 aa14.95□□□□□ -0.02
CPSF7-223ENST00000544669 PDS5AQ29RF7 1337 aaKnown RBP14.94□□□□□ -0.02
CPSF7-223ENST00000544669 MAGEB6P1A0A0J9YX57 407 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 BIN1O00499 593 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 TPM1P09493 284 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 TOP1P11387 765 aaKnown RBP14.94□□□□□ -0.02
CPSF7-223ENST00000544669 ATP6V1AP38606 617 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 CFAP100Q494V2 611 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 INTS5Q6P9B9 1019 aaKnown RBP14.94□□□□□ -0.02
CPSF7-223ENST00000544669 CATIPQ7Z7H3 387 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 ZNF654Q8IZM8 581 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 CAMTA2O94983 1202 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 CYP7A1P22680 504 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 CTDSPL2Q05D32 466 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 NCBP1Q09161 790 aaKnown RBP14.94□□□□□ -0.02
CPSF7-223ENST00000544669 POSTNQ15063 836 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 DDB1Q16531 1140 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 RAB11FIP4Q86YS3 637 aa14.94□□□□□ -0.02
CPSF7-223ENST00000544669 NUTM2AQ8IVF1 878 aaPredicted RBP14.94□□□□□ -0.02
CPSF7-223ENST00000544669 HELBQ8NG08 1087 aaPredicted RBP14.94□□□□□ -0.02
CPSF7-223ENST00000544669 GTPBP4Q9BZE4 634 aaKnown RBP14.94□□□□□ -0.02
CPSF7-223ENST00000544669 ZNF804BA4D1E1 1349 aa14.93□□□□□ -0.02
CPSF7-223ENST00000544669 PHLPP2Q6ZVD8 1323 aa14.93□□□□□ -0.02
CPSF7-223ENST00000544669 NUP98P52948 1817 aa14.93□□□□□ -0.02
CPSF7-223ENST00000544669 PRPF3O43395 683 aaKnown RBP14.93□□□□□ -0.02
CPSF7-223ENST00000544669 LMOD1P29536 600 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-223ENST00000544669 CRKLP46109 303 aaKnown RBP14.93□□□□□ -0.02
CPSF7-223ENST00000544669 CHRNDQ07001 517 aa14.93□□□□□ -0.02
CPSF7-223ENST00000544669 SF3B3Q15393 1217 aaKnown RBP14.93□□□□□ -0.02
CPSF7-223ENST00000544669 ANKRD18AQ8IVF6 992 aa14.93□□□□□ -0.02
CPSF7-223ENST00000544669 VSTM4Q8IW00 320 aa14.93□□□□□ -0.02
CPSF7-223ENST00000544669 ZNF397Q8NF99 534 aaPredicted RBP14.93□□□□□ -0.02
CPSF7-223ENST00000544669 GJB4Q9NTQ9 266 aa14.93□□□□□ -0.02
CPSF7-223ENST00000544669 NIP7Q9Y221 180 aaKnown RBP eCLIP14.93□□□□□ -0.02
CPSF7-223ENST00000544669 PCDHA5Q9Y5H7 936 aa14.93□□□□□ -0.02
CPSF7-223ENST00000544669 MROH7-TTC4A0A0A0MT08 1334 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 LOC102724428A0A0B4J2F2 783 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 TRIM75PA6NK02 468 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 BTBD18B2RXH4 712 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 ARHGAP6O43182 974 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 DDAH1O94760 285 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 NTSR2O95665 410 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 SIK1P57059 783 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 LONRF3Q496Y0 759 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 RRP12Q5JTH9 1297 aaKnown RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 UTP14CQ5TAP6 766 aaKnown RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 LCORLQ8N3X6 602 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 FBXW7Q969H0 707 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 AIFM3Q96NN9 605 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 L2HGDHQ9H9P8 463 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 BSDC1Q9NW68 430 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 AATFQ9NY61 560 aaKnown RBP eCLIP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 FBXO2Q9UK22 296 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 DOCK2Q92608 1830 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 FGRP09769 529 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 RXRAP19793 462 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 CDK11BP21127 795 aaKnown RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 KRT2P35908 639 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 TRAPPC10P48553 1259 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 SARSP49591 514 aaKnown RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 BCAMP50895 628 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 FAM193AP78312 1265 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 MDM2Q00987 491 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 SEMA3FQ13275 785 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 CCDC178Q5BJE1 867 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 ARMCX5Q6P1M9 558 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 METTL16Q86W50 562 aaKnown RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 FAM177A1Q8N128 213 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 ERCC4Q92889 916 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 PPP1R13BQ96KQ4 1090 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 CTAGE1Q96RT6 745 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 ZSCAN10Q96SZ4 725 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 RAI14Q9P0K7 980 aa14.92□□□□□ -0.02
CPSF7-223ENST00000544669 CICQ96RK0 1608 aaPredicted RBP14.92□□□□□ -0.02
CPSF7-223ENST00000544669 STX10O60499 249 aa14.91□□□□□ -0.02
CPSF7-223ENST00000544669 ETF1P62495 437 aaKnown RBP14.91□□□□□ -0.02
CPSF7-223ENST00000544669 PNOCQ13519 176 aa14.91□□□□□ -0.02
CPSF7-223ENST00000544669 E4F1Q66K89 784 aaPredicted RBP14.91□□□□□ -0.02
CPSF7-223ENST00000544669 HOMER1Q86YM7 354 aa14.91□□□□□ -0.02
CPSF7-223ENST00000544669 TMX1Q9H3N1 280 aa14.91□□□□□ -0.02
CPSF7-223ENST00000544669 IQSEC3Q9UPP2 1182 aaPredicted RBP14.91□□□□□ -0.02
CPSF7-223ENST00000544669 ARID5BQ14865 1188 aa14.9□□□□□ -0.02
CPSF7-223ENST00000544669 STK11IPQ8N1F8 1099 aa14.9□□□□□ -0.02
CPSF7-223ENST00000544669 NYXQ9GZU5 481 aa14.9□□□□□ -0.02
CPSF7-223ENST00000544669 ANKRD2Q9GZV1 360 aa14.9□□□□□ -0.02
CPSF7-223ENST00000544669 TRMT1Q9NXH9 659 aaKnown RBP14.9□□□□□ -0.02
CPSF7-223ENST00000544669 COL22A1Q8NFW1 1626 aaPredicted RBP14.9□□□□□ -0.02
CPSF7-223ENST00000544669 GTF2E1P29083 439 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-223ENST00000544669 TUBB4BP68371 445 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 MORC3Q14149 939 aa14.89□□□□□ -0.03
CPSF7-223ENST00000544669 SEC23AQ15436 765 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms