RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 H0YGN5 161 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 CAP2P40123 477 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 FLT3LGP49771 235 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 PPP4CP60510 307 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 TNNI3KQ59H18 835 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 TREML2Q5T2D2 321 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 ZKSCAN2Q63HK3 967 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 TEX11Q8IYF3 940 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 SH3RF3Q8TEJ3 882 aaPredicted RBP17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 ZNF512BQ96KM6 892 aaPredicted RBP17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 TBC1D2Q9BYX2 928 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 LRP2BPQ9P2M1 347 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 HERC5Q9UII4 1024 aaKnown RBP17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 FPGT-TNNI3KV9GXZ4 949 aa17.07■□□□□ 0.32
SEMA4D-224ENST00000544513 SPP2Q13103 211 aa17.06■□□□□ 0.32
SEMA4D-224ENST00000544513 IRF5Q13568 498 aa17.06■□□□□ 0.32
SEMA4D-224ENST00000544513 METTL16Q86W50 562 aaKnown RBP17.06■□□□□ 0.32
SEMA4D-224ENST00000544513 ZNF280CQ8ND82 737 aa17.06■□□□□ 0.32
SEMA4D-224ENST00000544513 PXYLP1Q8TE99 480 aa17.06■□□□□ 0.32
SEMA4D-224ENST00000544513 SMCR8Q8TEV9 937 aaPredicted RBP17.06■□□□□ 0.32
SEMA4D-224ENST00000544513 RNF208Q9H0X6 261 aa17.06■□□□□ 0.32
SEMA4D-224ENST00000544513 COLQQ9Y215 455 aaPredicted RBP17.06■□□□□ 0.32
SEMA4D-224ENST00000544513 LOC285556D6RIA3 1793 aa17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 DOCK3Q8IZD9 2030 aa17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 ADCY3O60266 1144 aa17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 IGSF3O75054 1194 aa17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 FXR1P51114 621 aaKnown RBP eCLIP17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 UBXN2AP68543 259 aa17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 DBNDD2Q9BQY9 259 aa17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 UNC93B1Q9H1C4 597 aa17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 DHX36Q9H2U1 1008 aaKnown RBP17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 SNRKQ9NRH2 765 aa17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 PI4KBQ9UBF8 816 aa17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 BIN2Q9UBW5 565 aaPredicted RBP17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 NOP58Q9Y2X3 529 aaKnown RBP17.05■□□□□ 0.32
SEMA4D-224ENST00000544513 TNPO2O14787 897 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-224ENST00000544513 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
SEMA4D-224ENST00000544513 FAM110CQ1W6H9 321 aa17.04■□□□□ 0.32
SEMA4D-224ENST00000544513 SH3D19Q5HYK7 790 aa17.04■□□□□ 0.32
SEMA4D-224ENST00000544513 NAA16Q6N069 864 aaPredicted RBP17.04■□□□□ 0.32
SEMA4D-224ENST00000544513 ADGRA1Q86SQ6 560 aa17.04■□□□□ 0.32
SEMA4D-224ENST00000544513 ANKRD13CQ8N6S4 541 aa17.04■□□□□ 0.32
SEMA4D-224ENST00000544513 U2AF1L4Q8WU68 220 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-224ENST00000544513 PNMA3Q9UL41 463 aa17.04■□□□□ 0.32
SEMA4D-224ENST00000544513 SIPA1L1O43166 1804 aa17.04■□□□□ 0.32
SEMA4D-224ENST00000544513 USP17L5A8MUK1 530 aa17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 BAG3O95817 575 aa17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 ELNP15502 786 aa17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 PLCG2P16885 1265 aa17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 GCLCP48506 637 aaPredicted RBP17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 HMGCS2P54868 508 aa17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 TTC39AQ5SRH9 613 aa17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 WDR18Q9BV38 432 aa17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 DNAJC18Q9H819 358 aa17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 AATFQ9NY61 560 aaKnown RBP eCLIP17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 ATAD5Q96QE3 1844 aa17.03■□□□□ 0.32
SEMA4D-224ENST00000544513 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.32
SEMA4D-224ENST00000544513 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
SEMA4D-224ENST00000544513 SURF6O75683 361 aaKnown RBP17.02■□□□□ 0.32
SEMA4D-224ENST00000544513 SGPL1O95470 568 aa17.02■□□□□ 0.32
SEMA4D-224ENST00000544513 INHAP05111 366 aa17.02■□□□□ 0.32
SEMA4D-224ENST00000544513 CAPN2P17655 700 aa17.02■□□□□ 0.32
SEMA4D-224ENST00000544513 JAG1P78504 1218 aa17.02■□□□□ 0.32
SEMA4D-224ENST00000544513 NOL10Q9BSC4 688 aaKnown RBP17.02■□□□□ 0.32
SEMA4D-224ENST00000544513 DBNLQ9UJU6 430 aaKnown RBP17.02■□□□□ 0.32
SEMA4D-224ENST00000544513 LAMA3Q16787 3333 aa17.02■□□□□ 0.31
SEMA4D-224ENST00000544513 FLT1P17948 1338 aa17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 RLBP1P12271 317 aa17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 PABPC4Q13310 644 aaKnown RBP eCLIP17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 OS9Q13438 667 aaPredicted RBP17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 FOXP4Q8IVH2 680 aaPredicted RBP17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 TGFBRAP1Q8WUH2 860 aa17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 COA7Q96BR5 231 aa17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 C1orf115Q9H7X2 142 aa17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 PIH1D3Q9NQM4 214 aaKnown RBP17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 PAK6Q9NQU5 681 aaPredicted RBP17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 GJD2Q9UKL4 321 aa17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 CDK5RAP2Q96SN8 1893 aa17.01■□□□□ 0.31
SEMA4D-224ENST00000544513 FOCADQ5VW36 1801 aa17■□□□□ 0.31
SEMA4D-224ENST00000544513 ASNSP08243 561 aa17■□□□□ 0.31
SEMA4D-224ENST00000544513 ZAP70P43403 619 aa17■□□□□ 0.31
SEMA4D-224ENST00000544513 BACE1P56817 501 aa17■□□□□ 0.31
SEMA4D-224ENST00000544513 MAPKAPK5Q8IW41 473 aa17■□□□□ 0.31
SEMA4D-224ENST00000544513 EAF2Q96CJ1 260 aaPredicted RBP17■□□□□ 0.31
SEMA4D-224ENST00000544513 AS3MTQ9HBK9 375 aa17■□□□□ 0.31
SEMA4D-224ENST00000544513 GINM1Q9NU53 330 aa17■□□□□ 0.31
SEMA4D-224ENST00000544513 MYO5AQ9Y4I1 1855 aaKnown RBP17■□□□□ 0.31
SEMA4D-224ENST00000544513 FARP2O94887 1054 aaPredicted RBP16.99■□□□□ 0.31
SEMA4D-224ENST00000544513 HOXA7P31268 230 aaPredicted RBP16.99■□□□□ 0.31
SEMA4D-224ENST00000544513 DPF3Q92784 378 aa16.99■□□□□ 0.31
SEMA4D-224ENST00000544513 HTATIP2Q9BUP3 242 aa16.99■□□□□ 0.31
SEMA4D-224ENST00000544513 CRISPLD2Q9H0B8 497 aa16.99■□□□□ 0.31
SEMA4D-224ENST00000544513 TLR7Q9NYK1 1049 aaKnown RBP16.99■□□□□ 0.31
SEMA4D-224ENST00000544513 MORF4L1Q9UBU8 362 aa16.99■□□□□ 0.31
SEMA4D-224ENST00000544513 PALD1Q9ULE6 856 aa16.99■□□□□ 0.31
SEMA4D-224ENST00000544513 MTMR2Q13614 643 aa16.98■□□□□ 0.31
SEMA4D-224ENST00000544513 SHROOM1Q2M3G4 852 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms