RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 GCLCP48506 637 aaPredicted RBP24.68■■□□□ 1.54
LPCAT3-211ENST00000543794 ZNF280CQ8ND82 737 aa24.68■■□□□ 1.54
LPCAT3-211ENST00000543794 NSUN4Q96CB9 384 aaKnown RBP24.68■■□□□ 1.54
LPCAT3-211ENST00000543794 TBC1D2Q9BYX2 928 aa24.68■■□□□ 1.54
LPCAT3-211ENST00000543794 HMG20BQ9P0W2 317 aa24.68■■□□□ 1.54
LPCAT3-211ENST00000543794 TAOK2Q9UL54 1235 aa24.68■■□□□ 1.54
LPCAT3-211ENST00000543794 LAMA3Q16787 3333 aa24.68■■□□□ 1.54
LPCAT3-211ENST00000543794 SRGAP3O43295 1099 aa24.67■■□□□ 1.54
LPCAT3-211ENST00000543794 GSTO1P78417 241 aa24.67■■□□□ 1.54
LPCAT3-211ENST00000543794 MTX1Q13505 466 aa24.67■■□□□ 1.54
LPCAT3-211ENST00000543794 PAWRQ96IZ0 340 aaKnown RBP24.67■■□□□ 1.54
LPCAT3-211ENST00000543794 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.67■■□□□ 1.54
LPCAT3-211ENST00000543794 PHIPQ8WWQ0 1821 aa24.66■■□□□ 1.54
LPCAT3-211ENST00000543794 CAP2P40123 477 aa24.66■■□□□ 1.54
LPCAT3-211ENST00000543794 SPATA5Q8NB90 893 aa24.66■■□□□ 1.54
LPCAT3-211ENST00000543794 NEUROD6Q96NK8 337 aa24.66■■□□□ 1.54
LPCAT3-211ENST00000543794 GJD2Q9UKL4 321 aa24.66■■□□□ 1.54
LPCAT3-211ENST00000543794 PTPRFP10586 1907 aa24.66■■□□□ 1.54
LPCAT3-211ENST00000543794 GNAI3P08754 354 aa24.65■■□□□ 1.54
LPCAT3-211ENST00000543794 PABPC4Q13310 644 aaKnown RBP eCLIP24.65■■□□□ 1.54
LPCAT3-211ENST00000543794 DOCK1Q14185 1865 aa24.65■■□□□ 1.54
LPCAT3-211ENST00000543794 RRP1BQ14684 758 aaKnown RBP24.65■■□□□ 1.54
LPCAT3-211ENST00000543794 TBC1D9Q6ZT07 1266 aa24.65■■□□□ 1.54
LPCAT3-211ENST00000543794 NECAB2Q7Z6G3 386 aa24.65■■□□□ 1.54
LPCAT3-211ENST00000543794 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.65■■□□□ 1.54
LPCAT3-211ENST00000543794 STAP2Q9UGK3 403 aa24.65■■□□□ 1.54
LPCAT3-211ENST00000543794 DOCK3Q8IZD9 2030 aa24.64■■□□□ 1.54
LPCAT3-211ENST00000543794 HMGCS2P54868 508 aa24.64■■□□□ 1.54
LPCAT3-211ENST00000543794 SH3D19Q5HYK7 790 aa24.64■■□□□ 1.54
LPCAT3-211ENST00000543794 PI16Q6UXB8 463 aa24.64■■□□□ 1.54
LPCAT3-211ENST00000543794 ARHGAP45Q92619 1136 aa24.64■■□□□ 1.54
LPCAT3-211ENST00000543794 ASCC2Q9H1I8 757 aaPredicted RBP24.64■■□□□ 1.54
LPCAT3-211ENST00000543794 COL2A1P02458 1487 aaPredicted RBP24.64■■□□□ 1.53
LPCAT3-211ENST00000543794 USP17L5A8MUK1 530 aa24.63■■□□□ 1.53
LPCAT3-211ENST00000543794 HMGCRP04035 888 aa24.63■■□□□ 1.53
LPCAT3-211ENST00000543794 ANKLE1Q8NAG6 615 aa24.63■■□□□ 1.53
LPCAT3-211ENST00000543794 HERC5Q9UII4 1024 aaKnown RBP24.63■■□□□ 1.53
LPCAT3-211ENST00000543794 ARID4AP29374 1257 aaPredicted RBP24.62■■□□□ 1.53
LPCAT3-211ENST00000543794 GORABQ5T7V8 394 aa24.62■■□□□ 1.53
LPCAT3-211ENST00000543794 DIS3LQ8TF46 1054 aaKnown RBP24.62■■□□□ 1.53
LPCAT3-211ENST00000543794 RAI14Q9P0K7 980 aa24.62■■□□□ 1.53
LPCAT3-211ENST00000543794 RPTORQ8N122 1335 aa24.61■■□□□ 1.53
LPCAT3-211ENST00000543794 SOX1O00570 391 aaPredicted RBP24.61■■□□□ 1.53
LPCAT3-211ENST00000543794 RARSP54136 660 aaKnown RBP24.61■■□□□ 1.53
LPCAT3-211ENST00000543794 AS3MTQ9HBK9 375 aa24.61■■□□□ 1.53
LPCAT3-211ENST00000543794 HMX1Q9NP08 348 aaPredicted RBP24.61■■□□□ 1.53
LPCAT3-211ENST00000543794 MORF4L1Q9UBU8 362 aa24.61■■□□□ 1.53
LPCAT3-211ENST00000543794 TEX11Q8IYF3 940 aa24.6■■□□□ 1.53
LPCAT3-211ENST00000543794 GDF15Q99988 308 aa24.6■■□□□ 1.53
LPCAT3-211ENST00000543794 WDR18Q9BV38 432 aa24.6■■□□□ 1.53
LPCAT3-211ENST00000543794 PI4KBQ9UBF8 816 aa24.6■■□□□ 1.53
LPCAT3-211ENST00000543794 BMP8BP34820 402 aa24.59■■□□□ 1.53
LPCAT3-211ENST00000543794 MCAMP43121 646 aa24.59■■□□□ 1.53
LPCAT3-211ENST00000543794 TRIM32Q13049 653 aa24.59■■□□□ 1.53
LPCAT3-211ENST00000543794 DHX36Q9H2U1 1008 aaKnown RBP24.59■■□□□ 1.53
LPCAT3-211ENST00000543794 LRP2BPQ9P2M1 347 aa24.59■■□□□ 1.53
LPCAT3-211ENST00000543794 HOXA7P31268 230 aaPredicted RBP24.58■■□□□ 1.53
LPCAT3-211ENST00000543794 MNX1P50219 401 aaPredicted RBP24.58■■□□□ 1.53
LPCAT3-211ENST00000543794 BACE1P56817 501 aa24.58■■□□□ 1.53
LPCAT3-211ENST00000543794 SH3RF3Q8TEJ3 882 aaPredicted RBP24.58■■□□□ 1.53
LPCAT3-211ENST00000543794 LRCH3Q96II8 777 aa24.58■■□□□ 1.53
LPCAT3-211ENST00000543794 NBPF3Q9H094 633 aa24.58■■□□□ 1.53
LPCAT3-211ENST00000543794 COL6A3P12111 3177 aa24.58■■□□□ 1.52
LPCAT3-211ENST00000543794 UQCRFS1P1P0C7P4 283 aa24.57■■□□□ 1.52
LPCAT3-211ENST00000543794 G3BP1Q13283 466 aaKnown RBP eCLIP24.57■■□□□ 1.52
LPCAT3-211ENST00000543794 ASNSP08243 561 aa24.56■■□□□ 1.52
LPCAT3-211ENST00000543794 METTL16Q86W50 562 aaKnown RBP24.56■■□□□ 1.52
LPCAT3-211ENST00000543794 SLC17A8Q8NDX2 589 aa24.56■■□□□ 1.52
LPCAT3-211ENST00000543794 P2RX7Q99572 595 aaKnown RBP24.56■■□□□ 1.52
LPCAT3-211ENST00000543794 OGDHLQ9ULD0 1010 aa24.56■■□□□ 1.52
LPCAT3-211ENST00000543794 BAG3O95817 575 aa24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 GNAI2P04899 355 aa24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 PPP4CP60510 307 aa24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 IRX3P78415 501 aaPredicted RBP24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 MTMR2Q13614 643 aa24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 MAP3K21Q5TCX8 1036 aa24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 FOXP4Q8IVH2 680 aaPredicted RBP24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 C7orf61Q8IZ16 206 aa24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 TRIB2Q92519 343 aa24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 NOL10Q9BSC4 688 aaKnown RBP24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 TMOD4Q9NZQ9 345 aa24.55■■□□□ 1.52
LPCAT3-211ENST00000543794 LOC285556D6RIA3 1793 aa24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 PNMA6EA0A0J9YXQ4 647 aa24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 C19orf81C9J6K1 198 aa24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 XRCC5P13010 732 aaKnown RBP24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 CYP2B6P20813 491 aa24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 JAG1P78504 1218 aa24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 NAA16Q6N069 864 aaPredicted RBP24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 GPRC5AQ8NFJ5 357 aa24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 C11orf49Q9H6J7 331 aa24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 AATFQ9NY61 560 aaKnown RBP eCLIP24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 ZMYND8Q9ULU4 1186 aaPredicted RBP24.54■■□□□ 1.52
LPCAT3-211ENST00000543794 PLCG2P16885 1265 aa24.53■■□□□ 1.52
LPCAT3-211ENST00000543794 TGFBRAP1Q8WUH2 860 aa24.53■■□□□ 1.52
LPCAT3-211ENST00000543794 NUDT12Q9BQG2 462 aa24.53■■□□□ 1.52
LPCAT3-211ENST00000543794 DNAJC18Q9H819 358 aa24.53■■□□□ 1.52
LPCAT3-211ENST00000543794 TXNRD2Q9NNW7 524 aa24.53■■□□□ 1.52
LPCAT3-211ENST00000543794 GINM1Q9NU53 330 aa24.53■■□□□ 1.52
LPCAT3-211ENST00000543794 A0A0C4DFX4 3053 aa24.53■■□□□ 1.52
LPCAT3-211ENST00000543794 HERVK_113P62684 666 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms