RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ROBO3Q96MS0 1386 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 CYP2D7A0A087X1C5 515 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 CYP2D6P10635 497 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 PCP11498 1178 aaKnown RBP14.09□□□□□ -0.15
DDB1-223ENST00000543658 PSMA5P28066 241 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 ANAPC15P60006 121 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 AKNAD1Q5T1N1 836 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 DCAF15Q66K64 600 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 MKNK2Q9HBH9 465 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 SWAP70Q9UH65 585 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 SERPINB13Q9UIV8 391 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 ANAPC4Q9UJX5 808 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 TAOK2Q9UL54 1235 aa14.09□□□□□ -0.15
DDB1-223ENST00000543658 SCAF8Q9UPN6 1271 aaKnown RBP14.09□□□□□ -0.15
DDB1-223ENST00000543658 DOCK1Q14185 1865 aa14.08□□□□□ -0.16
DDB1-223ENST00000543658 DDTLA6NHG4 134 aaPredicted RBP14.08□□□□□ -0.16
DDB1-223ENST00000543658 RBM25P49756 843 aaKnown RBP14.08□□□□□ -0.16
DDB1-223ENST00000543658 PLCD1P51178 756 aa14.08□□□□□ -0.16
DDB1-223ENST00000543658 SUPT20HL1Q3ZLR7 823 aa14.08□□□□□ -0.16
DDB1-223ENST00000543658 RRP12Q5JTH9 1297 aaKnown RBP14.08□□□□□ -0.16
DDB1-223ENST00000543658 CDC37L1Q7L3B6 337 aa14.08□□□□□ -0.16
DDB1-223ENST00000543658 ZFPM1Q8IX07 1006 aa14.08□□□□□ -0.16
DDB1-223ENST00000543658 NCOA7Q8NI08 942 aa14.08□□□□□ -0.16
DDB1-223ENST00000543658 STAG1Q8WVM7 1258 aa14.08□□□□□ -0.16
DDB1-223ENST00000543658 TBC1D32Q96NH3 1257 aa14.08□□□□□ -0.16
DDB1-223ENST00000543658 KRT23Q9C075 422 aa14.08□□□□□ -0.16
DDB1-223ENST00000543658 EHD4Q9H223 541 aa14.08□□□□□ -0.16
DDB1-223ENST00000543658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.08□□□□□ -0.16
DDB1-223ENST00000543658 HERC5Q9UII4 1024 aaKnown RBP14.08□□□□□ -0.16
DDB1-223ENST00000543658 MYH4Q9Y623 1939 aa14.07□□□□□ -0.16
DDB1-223ENST00000543658 ADM5C9JUS6 153 aa14.07□□□□□ -0.16
DDB1-223ENST00000543658 E7EWF7 191 aa14.07□□□□□ -0.16
DDB1-223ENST00000543658 C16orf86Q6ZW13 317 aa14.07□□□□□ -0.16
DDB1-223ENST00000543658 TBC1D10CQ8IV04 446 aa14.07□□□□□ -0.16
DDB1-223ENST00000543658 FOXP4Q8IVH2 680 aaPredicted RBP14.07□□□□□ -0.16
DDB1-223ENST00000543658 JAKMIP1Q96N16 626 aaKnown RBP14.07□□□□□ -0.16
DDB1-223ENST00000543658 SNX14Q9Y5W7 946 aa14.07□□□□□ -0.16
DDB1-223ENST00000543658 HMGB1P09429 215 aaKnown RBP14.06□□□□□ -0.16
DDB1-223ENST00000543658 NT5C2P49902 561 aa14.06□□□□□ -0.16
DDB1-223ENST00000543658 TSGA10IPQ3SY00 556 aa14.06□□□□□ -0.16
DDB1-223ENST00000543658 BLOC1S2Q6QNY1 142 aa14.06□□□□□ -0.16
DDB1-223ENST00000543658 SH3BP5LQ7L8J4 393 aa14.06□□□□□ -0.16
DDB1-223ENST00000543658 USP48Q86UV5 1035 aa14.06□□□□□ -0.16
DDB1-223ENST00000543658 ZNF444Q8N0Y2 327 aaPredicted RBP14.06□□□□□ -0.16
DDB1-223ENST00000543658 ESR2Q92731 530 aa14.06□□□□□ -0.16
DDB1-223ENST00000543658 DYNLL2Q96FJ2 89 aa14.06□□□□□ -0.16
DDB1-223ENST00000543658 NEK1Q96PY6 1258 aa14.06□□□□□ -0.16
DDB1-223ENST00000543658 PGAP2Q9UHJ9 254 aa14.06□□□□□ -0.16
DDB1-223ENST00000543658 OTOFQ9HC10 1997 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 TSPY2A6NKD2 308 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 RANBP6O60518 1105 aaKnown RBP14.05□□□□□ -0.16
DDB1-223ENST00000543658 POTEIP0CG38 1075 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 POTEJP0CG39 1038 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 TSPY3P0CV98 308 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 TSPY8P0CW00 308 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 CASTP20810 708 aaKnown RBP14.05□□□□□ -0.16
DDB1-223ENST00000543658 CDK8P49336 464 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 MAP1SQ66K74 1059 aaPredicted RBP14.05□□□□□ -0.16
DDB1-223ENST00000543658 CHADLQ6NUI6 762 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 KCNB2Q92953 911 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 ZNF341Q9BYN7 854 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 GLIS2Q9BZE0 524 aaPredicted RBP14.05□□□□□ -0.16
DDB1-223ENST00000543658 NEDD4P46934 1319 aa14.05□□□□□ -0.16
DDB1-223ENST00000543658 ERICH2A1L162 156 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 B4E1Z4 1266 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 MPHOSPH10O00566 681 aaKnown RBP14.04□□□□□ -0.16
DDB1-223ENST00000543658 ORC4O43929 436 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 PPP1R12BO60237 982 aaPredicted RBP14.04□□□□□ -0.16
DDB1-223ENST00000543658 TBC1D12O60347 775 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 PRDM1O75626 825 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 FGD1P98174 961 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 TTLL12Q14166 644 aaPredicted RBP14.04□□□□□ -0.16
DDB1-223ENST00000543658 SART3Q15020 963 aaKnown RBP14.04□□□□□ -0.16
DDB1-223ENST00000543658 NBPF12Q5TAG4 269 aaPredicted RBP14.04□□□□□ -0.16
DDB1-223ENST00000543658 PRAMEF18Q5VWM3 479 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 RASEFQ8IZ41 740 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 SLC44A5Q8NCS7 719 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 CDCA5Q96FF9 252 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 TEPSINQ96N21 525 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 NBPF3Q9H094 633 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 CABP5Q9NP86 173 aa14.04□□□□□ -0.16
DDB1-223ENST00000543658 GREB1LQ9C091 1923 aaPredicted RBP14.03□□□□□ -0.16
DDB1-223ENST00000543658 FAM196BA6NMK8 535 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 KDM4AO75164 1064 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 MCM5P33992 734 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 EVX2Q03828 476 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 GABPAQ06546 454 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 RABEP1Q15276 862 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 ADCK5Q3MIX3 580 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 CERKLQ49MI3 558 aaPredicted RBP14.03□□□□□ -0.16
DDB1-223ENST00000543658 STOX1Q6ZVD7 989 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 MIGA2Q7L4E1 593 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 CCDC17Q96LX7 622 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 UBAC1Q9BSL1 405 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 TM6SF1Q9BZW5 370 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 ZNF408Q9H9D4 720 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.03□□□□□ -0.16
DDB1-223ENST00000543658 CYP46A1Q9Y6A2 500 aa14.03□□□□□ -0.16
DDB1-223ENST00000543658 PAPPA2Q9BXP8 1791 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms