RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 PRDM10Q9NQV6 1147 aa6.31□□□□□ -1.4
GTF2H3-210ENST00000543005 SMG5Q9UPR3 1016 aaKnown RBP6.31□□□□□ -1.4
GTF2H3-210ENST00000543005 USTQ9Y2C2 406 aa6.31□□□□□ -1.4
GTF2H3-210ENST00000543005 ETV2O00321 342 aaPredicted RBP6.3□□□□□ -1.4
GTF2H3-210ENST00000543005 SSFA2P28290 1259 aa6.3□□□□□ -1.4
GTF2H3-210ENST00000543005 LINC00310P59036 64 aa6.3□□□□□ -1.4
GTF2H3-210ENST00000543005 DBX2Q6ZNG2 339 aa6.3□□□□□ -1.4
GTF2H3-210ENST00000543005 NPAS4Q8IUM7 802 aa6.3□□□□□ -1.4
GTF2H3-210ENST00000543005 CSRNP1Q96S65 589 aa6.3□□□□□ -1.4
GTF2H3-210ENST00000543005 TRAIPQ9BWF2 469 aa6.3□□□□□ -1.4
GTF2H3-210ENST00000543005 SSU72Q9NP77 194 aaKnown RBP6.3□□□□□ -1.4
GTF2H3-210ENST00000543005 DCP1AQ9NPI6 582 aaPredicted RBP6.3□□□□□ -1.4
GTF2H3-210ENST00000543005 SEMA3GQ9NS98 782 aa6.3□□□□□ -1.4
GTF2H3-210ENST00000543005 TMEM238LA0A1B0GVL6 79 aa6.29□□□□□ -1.4
GTF2H3-210ENST00000543005 TMEM88BA6NKF7 163 aa6.29□□□□□ -1.4
GTF2H3-210ENST00000543005 GNAT3A8MTJ3 354 aa6.29□□□□□ -1.4
GTF2H3-210ENST00000543005 EOMESO95936 686 aa6.29□□□□□ -1.4
GTF2H3-210ENST00000543005 NEFLP07196 543 aa6.29□□□□□ -1.4
GTF2H3-210ENST00000543005 PARD6AQ9NPB6 346 aa6.29□□□□□ -1.4
GTF2H3-210ENST00000543005 MAPK8IP1Q9UQF2 711 aa6.29□□□□□ -1.4
GTF2H3-210ENST00000543005 NUAK1O60285 661 aa6.28□□□□□ -1.4
GTF2H3-210ENST00000543005 NTF4P34130 210 aa6.28□□□□□ -1.4
GTF2H3-210ENST00000543005 FKBP4Q02790 459 aaKnown RBP eCLIP6.28□□□□□ -1.4
GTF2H3-210ENST00000543005 C22orf34Q6ZV56 151 aa6.28□□□□□ -1.4
GTF2H3-210ENST00000543005 SLC26A8Q96RN1 970 aa6.28□□□□□ -1.4
GTF2H3-210ENST00000543005 CARNS1A5YM72 827 aa6.27□□□□□ -1.41
GTF2H3-210ENST00000543005 FOXQ1Q9C009 403 aa6.27□□□□□ -1.41
GTF2H3-210ENST00000543005 KCNK12Q9HB15 430 aa6.27□□□□□ -1.41
GTF2H3-210ENST00000543005 ATP13A1Q9HD20 1204 aa6.27□□□□□ -1.41
GTF2H3-210ENST00000543005 NPHS2Q9NP85 383 aa6.27□□□□□ -1.41
GTF2H3-210ENST00000543005 CACNA2D2Q9NY47 1150 aa6.27□□□□□ -1.41
GTF2H3-210ENST00000543005 FOXD2O60548 495 aaPredicted RBP6.26□□□□□ -1.41
GTF2H3-210ENST00000543005 ZNF157P51786 506 aaPredicted RBP6.26□□□□□ -1.41
GTF2H3-210ENST00000543005 PRDM5Q9NQX1 630 aaPredicted RBP6.26□□□□□ -1.41
GTF2H3-210ENST00000543005 A0A0G2JLL6 359 aaPredicted RBP6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 PPP2R3AQ06190 1150 aa6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 RING1Q06587 406 aa6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 ABHD4Q8TB40 342 aa6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 KCNN1Q92952 543 aa6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 KCNB2Q92953 911 aa6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 HSPA12BQ96MM6 686 aa6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 ALPK1Q96QP1 1244 aa6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 TMEM39AQ9NV64 488 aa6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 TRAK1Q9UPV9 953 aa6.25□□□□□ -1.41
GTF2H3-210ENST00000543005 CPNE3O75131 537 aaKnown RBP6.24□□□□□ -1.41
GTF2H3-210ENST00000543005 BRD1O95696 1058 aa6.23□□□□□ -1.41
GTF2H3-210ENST00000543005 ARNTP27540 789 aa6.23□□□□□ -1.41
GTF2H3-210ENST00000543005 KRTAP10-2P60368 255 aa6.23□□□□□ -1.41
GTF2H3-210ENST00000543005 THAP5Q7Z6K1 395 aa6.23□□□□□ -1.41
GTF2H3-210ENST00000543005 STK35Q8TDR2 534 aa6.23□□□□□ -1.41
GTF2H3-210ENST00000543005 KCNC2Q96PR1 638 aa6.23□□□□□ -1.41
GTF2H3-210ENST00000543005 MTMR7Q9Y216 660 aa6.23□□□□□ -1.41
GTF2H3-210ENST00000543005 FANCGO15287 622 aa6.22□□□□□ -1.41
GTF2H3-210ENST00000543005 RAC2P15153 192 aa6.22□□□□□ -1.41
GTF2H3-210ENST00000543005 SYN1P17600 705 aa6.22□□□□□ -1.41
GTF2H3-210ENST00000543005 ZNF252P-AS1Q0IIN9 211 aa6.22□□□□□ -1.41
GTF2H3-210ENST00000543005 B4GALNT3Q6L9W6 998 aa6.22□□□□□ -1.41
GTF2H3-210ENST00000543005 UBE3DQ7Z6J8 389 aa6.22□□□□□ -1.41
GTF2H3-210ENST00000543005 SULF2Q8IWU5 870 aa6.22□□□□□ -1.41
GTF2H3-210ENST00000543005 IRF2BPLQ9H1B7 796 aa6.22□□□□□ -1.41
GTF2H3-210ENST00000543005 DNAJC25Q9H1X3 360 aa6.22□□□□□ -1.41
GTF2H3-210ENST00000543005 ST14Q9Y5Y6 855 aa6.22□□□□□ -1.41
GTF2H3-210ENST00000543005 ORC1Q13415 861 aa6.21□□□□□ -1.42
GTF2H3-210ENST00000543005 GRM2Q14416 872 aa6.21□□□□□ -1.42
GTF2H3-210ENST00000543005 PPM1JQ5JR12 505 aa6.21□□□□□ -1.42
GTF2H3-210ENST00000543005 BAHD1Q8TBE0 780 aaPredicted RBP6.21□□□□□ -1.42
GTF2H3-210ENST00000543005 GPBAR1Q8TDU6 330 aa6.21□□□□□ -1.42
GTF2H3-210ENST00000543005 CCDC74AQ96AQ1 378 aa6.21□□□□□ -1.42
GTF2H3-210ENST00000543005 ZCCHC4Q9H5U6 513 aa6.21□□□□□ -1.42
GTF2H3-210ENST00000543005 PRR33A8MZF0 331 aa6.2□□□□□ -1.42
GTF2H3-210ENST00000543005 FAM155AB1AL88 458 aaPredicted RBP6.2□□□□□ -1.42
GTF2H3-210ENST00000543005 LRIG2O94898 1065 aa6.2□□□□□ -1.42
GTF2H3-210ENST00000543005 PHLDB3Q6NSJ2 640 aa6.2□□□□□ -1.42
GTF2H3-210ENST00000543005 AEBP1Q8IUX7 1158 aa6.2□□□□□ -1.42
GTF2H3-210ENST00000543005 MFSD4AQ8N468 514 aa6.2□□□□□ -1.42
GTF2H3-210ENST00000543005 KCT2Q8NC54 265 aa6.2□□□□□ -1.42
GTF2H3-210ENST00000543005 FAM129BQ96TA1 746 aa6.2□□□□□ -1.42
GTF2H3-210ENST00000543005 EMILIN2Q9BXX0 1053 aa6.2□□□□□ -1.42
GTF2H3-210ENST00000543005 RTEL1Q9NZ71 1219 aa6.2□□□□□ -1.42
GTF2H3-210ENST00000543005 PATL2C9JE40 543 aaKnown RBP6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 SLITRK5O94991 958 aa6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 HPXP02790 462 aa6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 XRCC5P13010 732 aaKnown RBP6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 BMP7P18075 431 aa6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 NME2P22392 152 aa6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 ZBTB37Q5TC79 503 aa6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 MAP1SQ66K74 1059 aaPredicted RBP6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 ARMCX6Q7L4S7 300 aa6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 TTC6Q86TZ1 520 aa6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 CXorf38Q8TB03 319 aa6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 MYLIPQ8WY64 445 aa6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 GPN3Q9UHW5 284 aaPredicted RBP6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 CAPN6Q9Y6Q1 641 aa6.19□□□□□ -1.42
GTF2H3-210ENST00000543005 H3BS24 57 aa6.18□□□□□ -1.42
GTF2H3-210ENST00000543005 GADD45BO75293 160 aaPredicted RBP6.18□□□□□ -1.42
GTF2H3-210ENST00000543005 KCNA1Q09470 495 aa6.18□□□□□ -1.42
GTF2H3-210ENST00000543005 PDE3BQ13370 1112 aa6.18□□□□□ -1.42
GTF2H3-210ENST00000543005 NFIXQ14938 502 aa6.18□□□□□ -1.42
GTF2H3-210ENST00000543005 SFRP5Q5T4F7 317 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms