RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 COL2A1P02458 1487 aaPredicted RBP21.38■■□□□ 1.01
PPP1CA-210ENST00000542876 ADCY3O60266 1144 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 PLCG2P16885 1265 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 SPP2Q13103 211 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 PABPC4Q13310 644 aaKnown RBP eCLIP21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 TNNI3KQ59H18 835 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 NAA16Q6N069 864 aaPredicted RBP21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 FTSJ3Q8IY81 847 aaKnown RBP21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 ZNF280CQ8ND82 737 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 DPF3Q92784 378 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 COA7Q96BR5 231 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 SHISA4Q96DD7 197 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 DHX36Q9H2U1 1008 aaKnown RBP21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 SNRKQ9NRH2 765 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 HERC5Q9UII4 1024 aaKnown RBP21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 GABRQQ9UN88 632 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 FPGT-TNNI3KV9GXZ4 949 aa21.37■■□□□ 1.01
PPP1CA-210ENST00000542876 CAP2P40123 477 aa21.36■■□□□ 1.01
PPP1CA-210ENST00000542876 FLT3LGP49771 235 aa21.36■■□□□ 1.01
PPP1CA-210ENST00000542876 ANKRD13CQ8N6S4 541 aa21.36■■□□□ 1.01
PPP1CA-210ENST00000542876 SH3RF3Q8TEJ3 882 aaPredicted RBP21.36■■□□□ 1.01
PPP1CA-210ENST00000542876 HTATIP2Q9BUP3 242 aa21.36■■□□□ 1.01
PPP1CA-210ENST00000542876 AS3MTQ9HBK9 375 aa21.36■■□□□ 1.01
PPP1CA-210ENST00000542876 PI4KBQ9UBF8 816 aa21.36■■□□□ 1.01
PPP1CA-210ENST00000542876 USP17L5A8MUK1 530 aa21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 H0YGN5 161 aa21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 SURF6O75683 361 aaKnown RBP21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 ATP8B2P98198 1209 aa21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 POLA2Q14181 598 aa21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 TREML2Q5T2D2 321 aa21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 PXYLP1Q8TE99 480 aa21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 TRIM34Q9BYJ4 488 aa21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 AATFQ9NY61 560 aaKnown RBP eCLIP21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 TAOK2Q9UL54 1235 aa21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 DOCK1Q14185 1865 aa21.35■■□□□ 1.01
PPP1CA-210ENST00000542876 GCLCP48506 637 aaPredicted RBP21.34■■□□□ 1.01
PPP1CA-210ENST00000542876 HMGCS2P54868 508 aa21.34■■□□□ 1.01
PPP1CA-210ENST00000542876 IRF5Q13568 498 aa21.34■■□□□ 1.01
PPP1CA-210ENST00000542876 FAM110CQ1W6H9 321 aa21.34■■□□□ 1.01
PPP1CA-210ENST00000542876 SSH3Q8TE77 659 aa21.34■■□□□ 1.01
PPP1CA-210ENST00000542876 U2AF1L4Q8WU68 220 aaKnown RBP21.34■■□□□ 1.01
PPP1CA-210ENST00000542876 DBNDD2Q9BQY9 259 aa21.34■■□□□ 1.01
PPP1CA-210ENST00000542876 COLQQ9Y215 455 aaPredicted RBP21.34■■□□□ 1.01
PPP1CA-210ENST00000542876 IGSF3O75054 1194 aa21.33■■□□□ 1.01
PPP1CA-210ENST00000542876 ELNP15502 786 aa21.33■■□□□ 1.01
PPP1CA-210ENST00000542876 UNC93B1Q9H1C4 597 aa21.33■■□□□ 1.01
PPP1CA-210ENST00000542876 INHAP05111 366 aa21.32■■□□□ 1
PPP1CA-210ENST00000542876 CAPN2P17655 700 aa21.32■■□□□ 1
PPP1CA-210ENST00000542876 PPP4CP60510 307 aa21.32■■□□□ 1
PPP1CA-210ENST00000542876 MAPKAPK5Q8IW41 473 aa21.32■■□□□ 1
PPP1CA-210ENST00000542876 ITPRIPQ8IWB1 547 aa21.32■■□□□ 1
PPP1CA-210ENST00000542876 CRACR2BQ8N4Y2 399 aaPredicted RBP21.32■■□□□ 1
PPP1CA-210ENST00000542876 TGFBRAP1Q8WUH2 860 aa21.32■■□□□ 1
PPP1CA-210ENST00000542876 FARP2O94887 1054 aaPredicted RBP21.31■■□□□ 1
PPP1CA-210ENST00000542876 SGPL1O95470 568 aa21.31■■□□□ 1
PPP1CA-210ENST00000542876 CYP2E1P05181 493 aaPredicted RBP21.31■■□□□ 1
PPP1CA-210ENST00000542876 ASNSP08243 561 aa21.31■■□□□ 1
PPP1CA-210ENST00000542876 ZNF512BQ96KM6 892 aaPredicted RBP21.31■■□□□ 1
PPP1CA-210ENST00000542876 C1orf115Q9H7X2 142 aa21.31■■□□□ 1
PPP1CA-210ENST00000542876 CEP290O15078 2479 aa21.3■■□□□ 1
PPP1CA-210ENST00000542876 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
PPP1CA-210ENST00000542876 SH3D19Q5HYK7 790 aa21.3■■□□□ 1
PPP1CA-210ENST00000542876 FOXP4Q8IVH2 680 aaPredicted RBP21.3■■□□□ 1
PPP1CA-210ENST00000542876 TMOD4Q9NZQ9 345 aa21.3■■□□□ 1
PPP1CA-210ENST00000542876 FLT1P17948 1338 aa21.29■■□□□ 1
PPP1CA-210ENST00000542876 TFRCP02786 760 aaKnown RBP21.29■■□□□ 1
PPP1CA-210ENST00000542876 ZAP70P43403 619 aa21.29■■□□□ 1
PPP1CA-210ENST00000542876 FXR1P51114 621 aaKnown RBP eCLIP21.29■■□□□ 1
PPP1CA-210ENST00000542876 IRX3P78415 501 aaPredicted RBP21.29■■□□□ 1
PPP1CA-210ENST00000542876 RRP1BQ14684 758 aaKnown RBP21.29■■□□□ 1
PPP1CA-210ENST00000542876 UBE2Q1Q7Z7E8 422 aa21.29■■□□□ 1
PPP1CA-210ENST00000542876 WDR18Q9BV38 432 aa21.29■■□□□ 1
PPP1CA-210ENST00000542876 ASCC2Q9H1I8 757 aaPredicted RBP21.29■■□□□ 1
PPP1CA-210ENST00000542876 NR2E3Q9Y5X4 410 aa21.29■■□□□ 1
PPP1CA-210ENST00000542876 HLA-DOAP06340 250 aa21.28■■□□□ 1
PPP1CA-210ENST00000542876 BACE1P56817 501 aa21.28■■□□□ 1
PPP1CA-210ENST00000542876 MTMR2Q13614 643 aa21.28■■□□□ 1
PPP1CA-210ENST00000542876 CHRDL2Q6WN34 429 aa21.28■■□□□ 1
PPP1CA-210ENST00000542876 DEFB118Q96PH6 123 aa21.28■■□□□ 1
PPP1CA-210ENST00000542876 GINM1Q9NU53 330 aa21.28■■□□□ 1
PPP1CA-210ENST00000542876 PALD1Q9ULE6 856 aa21.28■■□□□ 1
PPP1CA-210ENST00000542876 NOP58Q9Y2X3 529 aaKnown RBP21.28■■□□□ 1
PPP1CA-210ENST00000542876 PHIPQ8WWQ0 1821 aa21.27■■□□□ 1
PPP1CA-210ENST00000542876 ADGRA1Q86SQ6 560 aa21.27■■□□□ 1
PPP1CA-210ENST00000542876 CCDC8Q9H0W5 538 aaPredicted RBP21.27■■□□□ 1
PPP1CA-210ENST00000542876 PIH1D3Q9NQM4 214 aaKnown RBP21.27■■□□□ 1
PPP1CA-210ENST00000542876 DBNLQ9UJU6 430 aaKnown RBP21.27■■□□□ 1
PPP1CA-210ENST00000542876 PTPRFP10586 1907 aa21.27■■□□□ 1
PPP1CA-210ENST00000542876 C19orf81C9J6K1 198 aa21.26■□□□□ 0.99
PPP1CA-210ENST00000542876 ZBTB7BO15156 539 aaPredicted RBP21.26■□□□□ 0.99
PPP1CA-210ENST00000542876 IDH1O75874 414 aaKnown RBP21.26■□□□□ 0.99
PPP1CA-210ENST00000542876 CYP7A1P22680 504 aa21.26■□□□□ 0.99
PPP1CA-210ENST00000542876 CERS3Q8IU89 383 aa21.26■□□□□ 0.99
PPP1CA-210ENST00000542876 SAP30BPQ9UHR5 308 aaKnown RBP21.26■□□□□ 0.99
PPP1CA-210ENST00000542876 MGAMO43451 1857 aa21.26■□□□□ 0.99
PPP1CA-210ENST00000542876 USP17L10C9JJH3 530 aa21.25■□□□□ 0.99
PPP1CA-210ENST00000542876 GDF11O95390 407 aa21.25■□□□□ 0.99
PPP1CA-210ENST00000542876 METTL16Q86W50 562 aaKnown RBP21.25■□□□□ 0.99
PPP1CA-210ENST00000542876 PAK6Q9NQU5 681 aaPredicted RBP21.25■□□□□ 0.99
PPP1CA-210ENST00000542876 TLR7Q9NYK1 1049 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms