RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 RNF208Q9H0X6 261 aa14.59□□□□□ -0.07
PTPN6-219ENST00000542848 LRP2BPQ9P2M1 347 aa14.59□□□□□ -0.07
PTPN6-219ENST00000542848 BIN2Q9UBW5 565 aaPredicted RBP14.59□□□□□ -0.07
PTPN6-219ENST00000542848 AGTPBP1Q9UPW5 1226 aa14.59□□□□□ -0.07
PTPN6-219ENST00000542848 IGSF3O75054 1194 aa14.58□□□□□ -0.08
PTPN6-219ENST00000542848 CAPN2P17655 700 aa14.58□□□□□ -0.08
PTPN6-219ENST00000542848 POLA2Q14181 598 aa14.58□□□□□ -0.08
PTPN6-219ENST00000542848 ZKSCAN2Q63HK3 967 aa14.58□□□□□ -0.08
PTPN6-219ENST00000542848 MIER1Q8N108 512 aa14.58□□□□□ -0.08
PTPN6-219ENST00000542848 PXYLP1Q8TE99 480 aa14.58□□□□□ -0.08
PTPN6-219ENST00000542848 SMCR8Q8TEV9 937 aaPredicted RBP14.58□□□□□ -0.08
PTPN6-219ENST00000542848 NOL10Q9BSC4 688 aaKnown RBP14.58□□□□□ -0.08
PTPN6-219ENST00000542848 HERC5Q9UII4 1024 aaKnown RBP14.58□□□□□ -0.08
PTPN6-219ENST00000542848 PNMA3Q9UL41 463 aa14.58□□□□□ -0.08
PTPN6-219ENST00000542848 GABRQQ9UN88 632 aa14.58□□□□□ -0.08
PTPN6-219ENST00000542848 ADCY3O60266 1144 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 CAP2P40123 477 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 ATP8B2P98198 1209 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 IRF5Q13568 498 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 CCDC158Q5M9N0 1113 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 TEX11Q8IYF3 940 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 TMEM57Q8N5G2 664 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 ZNF280CQ8ND82 737 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 SSH3Q8TE77 659 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 DHX36Q9H2U1 1008 aaKnown RBP14.57□□□□□ -0.08
PTPN6-219ENST00000542848 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.57□□□□□ -0.08
PTPN6-219ENST00000542848 PI4KBQ9UBF8 816 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 PLXNB2O15031 1838 aa14.57□□□□□ -0.08
PTPN6-219ENST00000542848 FAM196BA6NMK8 535 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 USP17L5A8MUK1 530 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 H0YGN5 161 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 TNPO2O14787 897 aaKnown RBP14.56□□□□□ -0.08
PTPN6-219ENST00000542848 BAG3O95817 575 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 PLCG2P16885 1265 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 FLT3LGP49771 235 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 PPP4CP60510 307 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 SPP2Q13103 211 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 PABPC4Q13310 644 aaKnown RBP eCLIP14.56□□□□□ -0.08
PTPN6-219ENST00000542848 FAM110CQ1W6H9 321 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 TNNI3KQ59H18 835 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 TTC39AQ5SRH9 613 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 TREML2Q5T2D2 321 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 UBE2Q1Q7Z7E8 422 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 CCDC84Q86UT8 332 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-219ENST00000542848 SH3RF3Q8TEJ3 882 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-219ENST00000542848 COLQQ9Y215 455 aaPredicted RBP14.56□□□□□ -0.08
PTPN6-219ENST00000542848 FPGT-TNNI3KV9GXZ4 949 aa14.56□□□□□ -0.08
PTPN6-219ENST00000542848 SGPL1O95470 568 aa14.55□□□□□ -0.08
PTPN6-219ENST00000542848 GCLCP48506 637 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-219ENST00000542848 SH3D19Q5HYK7 790 aa14.55□□□□□ -0.08
PTPN6-219ENST00000542848 NAA16Q6N069 864 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-219ENST00000542848 ANKRD13CQ8N6S4 541 aa14.55□□□□□ -0.08
PTPN6-219ENST00000542848 DPF3Q92784 378 aa14.55□□□□□ -0.08
PTPN6-219ENST00000542848 COA7Q96BR5 231 aa14.55□□□□□ -0.08
PTPN6-219ENST00000542848 ZNF512BQ96KM6 892 aaPredicted RBP14.55□□□□□ -0.08
PTPN6-219ENST00000542848 HTATIP2Q9BUP3 242 aa14.55□□□□□ -0.08
PTPN6-219ENST00000542848 AS3MTQ9HBK9 375 aa14.55□□□□□ -0.08
PTPN6-219ENST00000542848 ALPK3Q96L96 1907 aa14.54□□□□□ -0.08
PTPN6-219ENST00000542848 SURF6O75683 361 aaKnown RBP14.54□□□□□ -0.08
PTPN6-219ENST00000542848 FXR1P51114 621 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPN6-219ENST00000542848 OS9Q13438 667 aaPredicted RBP14.54□□□□□ -0.08
PTPN6-219ENST00000542848 RRP1BQ14684 758 aaKnown RBP14.54□□□□□ -0.08
PTPN6-219ENST00000542848 FOXP4Q8IVH2 680 aaPredicted RBP14.54□□□□□ -0.08
PTPN6-219ENST00000542848 U2AF1L4Q8WU68 220 aaKnown RBP14.54□□□□□ -0.08
PTPN6-219ENST00000542848 DBNDD2Q9BQY9 259 aa14.54□□□□□ -0.08
PTPN6-219ENST00000542848 WDR18Q9BV38 432 aa14.54□□□□□ -0.08
PTPN6-219ENST00000542848 UNC93B1Q9H1C4 597 aa14.54□□□□□ -0.08
PTPN6-219ENST00000542848 SNRKQ9NRH2 765 aa14.54□□□□□ -0.08
PTPN6-219ENST00000542848 AATFQ9NY61 560 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPN6-219ENST00000542848 INHAP05111 366 aa14.53□□□□□ -0.08
PTPN6-219ENST00000542848 CYP2E1P05181 493 aaPredicted RBP14.53□□□□□ -0.08
PTPN6-219ENST00000542848 ELNP15502 786 aa14.53□□□□□ -0.08
PTPN6-219ENST00000542848 HMGCS2P54868 508 aa14.53□□□□□ -0.08
PTPN6-219ENST00000542848 METTL16Q86W50 562 aaKnown RBP14.53□□□□□ -0.08
PTPN6-219ENST00000542848 GINM1Q9NU53 330 aa14.53□□□□□ -0.08
PTPN6-219ENST00000542848 NOP58Q9Y2X3 529 aaKnown RBP14.53□□□□□ -0.08
PTPN6-219ENST00000542848 RANBP2P49792 3224 aaKnown RBP14.53□□□□□ -0.08
PTPN6-219ENST00000542848 ZBTB7BO15156 539 aaPredicted RBP14.52□□□□□ -0.09
PTPN6-219ENST00000542848 ASNSP08243 561 aa14.52□□□□□ -0.09
PTPN6-219ENST00000542848 TGFBRAP1Q8WUH2 860 aa14.52□□□□□ -0.09
PTPN6-219ENST00000542848 ASCC2Q9H1I8 757 aaPredicted RBP14.52□□□□□ -0.09
PTPN6-219ENST00000542848 FLT1P17948 1338 aa14.51□□□□□ -0.09
PTPN6-219ENST00000542848 C19orf81C9J6K1 198 aa14.51□□□□□ -0.09
PTPN6-219ENST00000542848 FARP2O94887 1054 aaPredicted RBP14.51□□□□□ -0.09
PTPN6-219ENST00000542848 TFRCP02786 760 aaKnown RBP14.51□□□□□ -0.09
PTPN6-219ENST00000542848 HOXA7P31268 230 aaPredicted RBP14.51□□□□□ -0.09
PTPN6-219ENST00000542848 BACE1P56817 501 aa14.51□□□□□ -0.09
PTPN6-219ENST00000542848 ADGRA1Q86SQ6 560 aa14.51□□□□□ -0.09
PTPN6-219ENST00000542848 MAPKAPK5Q8IW41 473 aa14.51□□□□□ -0.09
PTPN6-219ENST00000542848 FTSJ3Q8IY81 847 aaKnown RBP14.51□□□□□ -0.09
PTPN6-219ENST00000542848 PAK6Q9NQU5 681 aaPredicted RBP14.51□□□□□ -0.09
PTPN6-219ENST00000542848 NR2E3Q9Y5X4 410 aa14.51□□□□□ -0.09
PTPN6-219ENST00000542848 MYH8P13535 1937 aa14.51□□□□□ -0.09
PTPN6-219ENST00000542848 ZAP70P43403 619 aa14.5□□□□□ -0.09
PTPN6-219ENST00000542848 CRACR2BQ8N4Y2 399 aaPredicted RBP14.5□□□□□ -0.09
PTPN6-219ENST00000542848 DEFB118Q96PH6 123 aa14.5□□□□□ -0.09
PTPN6-219ENST00000542848 TRIM34Q9BYJ4 488 aa14.5□□□□□ -0.09
PTPN6-219ENST00000542848 CRISPLD2Q9H0B8 497 aa14.5□□□□□ -0.09
PTPN6-219ENST00000542848 C1orf115Q9H7X2 142 aa14.5□□□□□ -0.09
PTPN6-219ENST00000542848 PIH1D3Q9NQM4 214 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms