RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 TOMM22Q9NS69 142 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 FAM198AQ9UFP1 575 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 HDAC9Q9UKV0 1011 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 BRPF3Q9ULD4 1205 aa15.64■□□□□ 0.09
CHFR-221ENST00000542714 GREB1LQ9C091 1923 aaPredicted RBP15.64■□□□□ 0.09
CHFR-221ENST00000542714 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
CHFR-221ENST00000542714 SLC3A2P08195 630 aaKnown RBP15.63■□□□□ 0.09
CHFR-221ENST00000542714 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
CHFR-221ENST00000542714 LMNB1P20700 586 aa15.63■□□□□ 0.09
CHFR-221ENST00000542714 CACNB3P54284 484 aa15.63■□□□□ 0.09
CHFR-221ENST00000542714 ZFPM1Q8IX07 1006 aa15.63■□□□□ 0.09
CHFR-221ENST00000542714 MTMR14Q8NCE2 650 aa15.63■□□□□ 0.09
CHFR-221ENST00000542714 SLC44A5Q8NCS7 719 aa15.63■□□□□ 0.09
CHFR-221ENST00000542714 ESR2Q92731 530 aa15.63■□□□□ 0.09
CHFR-221ENST00000542714 TDRD3Q9H7E2 651 aaKnown RBP15.63■□□□□ 0.09
CHFR-221ENST00000542714 LY9Q9HBG7 655 aa15.63■□□□□ 0.09
CHFR-221ENST00000542714 ANGEL1Q9UNK9 670 aaKnown RBP15.63■□□□□ 0.09
CHFR-221ENST00000542714 PFKFB2O60825 505 aa15.62■□□□□ 0.09
CHFR-221ENST00000542714 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
CHFR-221ENST00000542714 RPS12P25398 132 aaKnown RBP15.62■□□□□ 0.09
CHFR-221ENST00000542714 PDIA3P30101 505 aaKnown RBP15.62■□□□□ 0.09
CHFR-221ENST00000542714 ZNF280AP59817 542 aaPredicted RBP15.62■□□□□ 0.09
CHFR-221ENST00000542714 STK3Q13188 491 aa15.62■□□□□ 0.09
CHFR-221ENST00000542714 C16orf86Q6ZW13 317 aa15.62■□□□□ 0.09
CHFR-221ENST00000542714 AMOTL1Q8IY63 956 aa15.62■□□□□ 0.09
CHFR-221ENST00000542714 GTF3C6Q969F1 213 aa15.62■□□□□ 0.09
CHFR-221ENST00000542714 ZNF274Q96GC6 653 aaPredicted RBP15.62■□□□□ 0.09
CHFR-221ENST00000542714 ZKSCAN3Q9BRR0 538 aa15.62■□□□□ 0.09
CHFR-221ENST00000542714 MTA3Q9BTC8 594 aa15.62■□□□□ 0.09
CHFR-221ENST00000542714 CHMP5Q9NZZ3 219 aa15.62■□□□□ 0.09
CHFR-221ENST00000542714 CIZ1Q9ULV3 898 aaPredicted RBP15.62■□□□□ 0.09
CHFR-221ENST00000542714 COL2A1P02458 1487 aaPredicted RBP15.62■□□□□ 0.09
CHFR-221ENST00000542714 KLF18A0A0U1RQI7 1052 aa15.61■□□□□ 0.09
CHFR-221ENST00000542714 IFIT3O14879 490 aaKnown RBP15.61■□□□□ 0.09
CHFR-221ENST00000542714 DTNBO60941 627 aa15.61■□□□□ 0.09
CHFR-221ENST00000542714 GMPSP49915 693 aaPredicted RBP15.61■□□□□ 0.09
CHFR-221ENST00000542714 EIF6P56537 245 aaKnown RBP15.61■□□□□ 0.09
CHFR-221ENST00000542714 GABPAQ06546 454 aa15.61■□□□□ 0.09
CHFR-221ENST00000542714 PDE4BQ07343 736 aa15.61■□□□□ 0.09
CHFR-221ENST00000542714 SCRN1Q12765 414 aa15.61■□□□□ 0.09
CHFR-221ENST00000542714 DLGAP5Q15398 846 aa15.61■□□□□ 0.09
CHFR-221ENST00000542714 SEC23AQ15436 765 aa15.61■□□□□ 0.09
CHFR-221ENST00000542714 TMEM67Q5HYA8 995 aa15.61■□□□□ 0.09
CHFR-221ENST00000542714 SH3BP5LQ7L8J4 393 aa15.61■□□□□ 0.09
CHFR-221ENST00000542714 CWC22Q9HCG8 908 aaKnown RBP15.61■□□□□ 0.09
CHFR-221ENST00000542714 HPS5Q9UPZ3 1129 aa15.61■□□□□ 0.09
CHFR-221ENST00000542714 RANBP6O60518 1105 aaKnown RBP15.6■□□□□ 0.09
CHFR-221ENST00000542714 RASA1P20936 1047 aa15.6■□□□□ 0.09
CHFR-221ENST00000542714 LIFRP42702 1097 aa15.6■□□□□ 0.09
CHFR-221ENST00000542714 CDK8P49336 464 aa15.6■□□□□ 0.09
CHFR-221ENST00000542714 SPDYE2Q495Y8 402 aa15.6■□□□□ 0.09
CHFR-221ENST00000542714 FAM47AQ5JRC9 791 aa15.6■□□□□ 0.09
CHFR-221ENST00000542714 SGMS1Q86VZ5 419 aa15.6■□□□□ 0.09
CHFR-221ENST00000542714 OGFOD1Q8N543 542 aa15.6■□□□□ 0.09
CHFR-221ENST00000542714 ZNF70Q9UC06 446 aaPredicted RBP15.6■□□□□ 0.09
CHFR-221ENST00000542714 CNTNAP1P78357 1384 aa15.6■□□□□ 0.09
CHFR-221ENST00000542714 CLRN2A0PK11 232 aa15.59■□□□□ 0.09
CHFR-221ENST00000542714 DDTLA6NHG4 134 aaPredicted RBP15.59■□□□□ 0.09
CHFR-221ENST00000542714 GOLGA8BA8MQT2 603 aa15.59■□□□□ 0.09
CHFR-221ENST00000542714 ENTPD3O75355 529 aa15.59■□□□□ 0.09
CHFR-221ENST00000542714 TCP10Q12799 353 aa15.59■□□□□ 0.09
CHFR-221ENST00000542714 TTC6Q86TZ1 520 aa15.59■□□□□ 0.09
CHFR-221ENST00000542714 RAB11FIP4Q86YS3 637 aa15.59■□□□□ 0.09
CHFR-221ENST00000542714 DPF2Q92785 391 aa15.59■□□□□ 0.09
CHFR-221ENST00000542714 ZSCAN10Q96SZ4 725 aaPredicted RBP15.59■□□□□ 0.09
CHFR-221ENST00000542714 NCOA5Q9HCD5 579 aaKnown RBP15.59■□□□□ 0.09
CHFR-221ENST00000542714 GJA3Q9Y6H8 435 aa15.59■□□□□ 0.09
CHFR-221ENST00000542714 TNKSO95271 1327 aa15.59■□□□□ 0.09
CHFR-221ENST00000542714 ATRNL1Q5VV63 1379 aa15.59■□□□□ 0.09
CHFR-221ENST00000542714 NMT2O60551 498 aa15.58■□□□□ 0.08
CHFR-221ENST00000542714 CTDNEP1O95476 244 aa15.58■□□□□ 0.08
CHFR-221ENST00000542714 EGFRP00533 1210 aa15.58■□□□□ 0.08
CHFR-221ENST00000542714 NT5C2P49902 561 aa15.58■□□□□ 0.08
CHFR-221ENST00000542714 MMP14P50281 582 aa15.58■□□□□ 0.08
CHFR-221ENST00000542714 CCT2P78371 535 aaKnown RBP15.58■□□□□ 0.08
CHFR-221ENST00000542714 APOA5Q6Q788 366 aa15.58■□□□□ 0.08
CHFR-221ENST00000542714 ENAHQ8N8S7 591 aaPredicted RBP15.58■□□□□ 0.08
CHFR-221ENST00000542714 UBAC1Q9BSL1 405 aa15.58■□□□□ 0.08
CHFR-221ENST00000542714 EHD4Q9H223 541 aa15.58■□□□□ 0.08
CHFR-221ENST00000542714 MYOZ2Q9NPC6 264 aa15.58■□□□□ 0.08
CHFR-221ENST00000542714 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.58■□□□□ 0.08
CHFR-221ENST00000542714 NID2Q14112 1375 aa15.58■□□□□ 0.08
CHFR-221ENST00000542714 SLURP2P0DP57 97 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 GJB2P29033 226 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 SHMT1P34896 483 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 TFAP4Q01664 338 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 PKP1Q13835 747 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 WTAPQ15007 396 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 SART3Q15020 963 aaKnown RBP15.57■□□□□ 0.08
CHFR-221ENST00000542714 NBPF9Q3BBW0 867 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 RCSD1Q6JBY9 416 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 MICALL2Q8IY33 904 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 DNAJC18Q9H819 358 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 MKNK2Q9HBH9 465 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 IL17RBQ9NRM6 502 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 NAP1L2Q9ULW6 460 aaPredicted RBP15.57■□□□□ 0.08
CHFR-221ENST00000542714 SMC3Q9UQE7 1217 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 PLIN4Q96Q06 1357 aa15.57■□□□□ 0.08
CHFR-221ENST00000542714 TSPY2A6NKD2 308 aa15.56■□□□□ 0.08
CHFR-221ENST00000542714 TCP10L2B9ZVM9 353 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms