RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 FAM117AQ9C073 453 aa10.52□□□□□ -0.73
CLPB-211ENST00000542555 KDM4CQ9H3R0 1056 aa10.52□□□□□ -0.73
CLPB-211ENST00000542555 GBA2Q9HCG7 927 aaPredicted RBP10.52□□□□□ -0.73
CLPB-211ENST00000542555 RRP7AQ9Y3A4 280 aaKnown RBP10.52□□□□□ -0.73
CLPB-211ENST00000542555 LTBP1Q14766 1721 aa10.52□□□□□ -0.73
CLPB-211ENST00000542555 MAP3K15Q6ZN16 1313 aa10.52□□□□□ -0.73
CLPB-211ENST00000542555 RAD17O75943 681 aa10.51□□□□□ -0.73
CLPB-211ENST00000542555 COL8A1P27658 744 aa10.51□□□□□ -0.73
CLPB-211ENST00000542555 TAF7Q15545 349 aaPredicted RBP10.51□□□□□ -0.73
CLPB-211ENST00000542555 KRT26Q7Z3Y9 468 aa10.51□□□□□ -0.73
CLPB-211ENST00000542555 PGBD3Q8N328 593 aa10.51□□□□□ -0.73
CLPB-211ENST00000542555 ZNF592Q92610 1267 aa10.51□□□□□ -0.73
CLPB-211ENST00000542555 PCDHB11Q9Y5F2 797 aa10.51□□□□□ -0.73
CLPB-211ENST00000542555 CASP8AP2Q9UKL3 1982 aa10.51□□□□□ -0.73
CLPB-211ENST00000542555 CLSPNQ9HAW4 1339 aa10.51□□□□□ -0.73
CLPB-211ENST00000542555 ABCC12Q96J65 1359 aa10.51□□□□□ -0.73
CLPB-211ENST00000542555 IBTKQ9P2D0 1353 aaPredicted RBP10.51□□□□□ -0.73
CLPB-211ENST00000542555 U2AF1L5P0DN76 240 aaPredicted RBP10.5□□□□□ -0.73
CLPB-211ENST00000542555 MYL6BP14649 208 aa10.5□□□□□ -0.73
CLPB-211ENST00000542555 PHKA2P46019 1235 aa10.5□□□□□ -0.73
CLPB-211ENST00000542555 MCCD1P59942 119 aaPredicted RBP10.5□□□□□ -0.73
CLPB-211ENST00000542555 U2AF1Q01081 240 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLPB-211ENST00000542555 SUSD4Q5VX71 490 aa10.5□□□□□ -0.73
CLPB-211ENST00000542555 DDX46Q7L014 1031 aaKnown RBP10.5□□□□□ -0.73
CLPB-211ENST00000542555 MCM10Q7L590 875 aa10.5□□□□□ -0.73
CLPB-211ENST00000542555 SP8Q8IXZ3 490 aa10.5□□□□□ -0.73
CLPB-211ENST00000542555 TRIM34Q9BYJ4 488 aa10.5□□□□□ -0.73
CLPB-211ENST00000542555 RIC1Q4ADV7 1423 aa10.5□□□□□ -0.73
CLPB-211ENST00000542555 A0A1B0GTH6 734 aa10.49□□□□□ -0.73
CLPB-211ENST00000542555 FBXO45P0C2W1 286 aa10.49□□□□□ -0.73
CLPB-211ENST00000542555 BMP4P12644 408 aa10.49□□□□□ -0.73
CLPB-211ENST00000542555 SCTRP47872 440 aa10.49□□□□□ -0.73
CLPB-211ENST00000542555 KIAA2012Q0VF49 1180 aa10.49□□□□□ -0.73
CLPB-211ENST00000542555 C1orf229Q6ZS94 237 aaPredicted RBP10.49□□□□□ -0.73
CLPB-211ENST00000542555 TMC4Q7Z404 712 aa10.49□□□□□ -0.73
CLPB-211ENST00000542555 PHACTR3Q96KR7 559 aa10.49□□□□□ -0.73
CLPB-211ENST00000542555 UTP14AQ9BVJ6 771 aaKnown RBP10.49□□□□□ -0.73
CLPB-211ENST00000542555 RTFDC1Q9BY42 306 aaPredicted RBP10.49□□□□□ -0.73
CLPB-211ENST00000542555 RAB6BQ9NRW1 208 aa10.49□□□□□ -0.73
CLPB-211ENST00000542555 RNF186Q9NXI6 227 aa10.49□□□□□ -0.73
CLPB-211ENST00000542555 SIPA1L3O60292 1781 aaPredicted RBP10.49□□□□□ -0.73
CLPB-211ENST00000542555 SNED1Q8TER0 1413 aa10.49□□□□□ -0.73
CLPB-211ENST00000542555 TRPM4Q8TD43 1214 aa10.48□□□□□ -0.73
CLPB-211ENST00000542555 DPF2Q92785 391 aa10.48□□□□□ -0.73
CLPB-211ENST00000542555 NTSR2O95665 410 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 GNRH1P01148 92 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 RPS12P25398 132 aaKnown RBP10.47□□□□□ -0.73
CLPB-211ENST00000542555 HIRAP54198 1017 aaPredicted RBP10.47□□□□□ -0.73
CLPB-211ENST00000542555 TRIM26Q12899 539 aaPredicted RBP10.47□□□□□ -0.73
CLPB-211ENST00000542555 LBRQ14739 615 aaKnown RBP10.47□□□□□ -0.73
CLPB-211ENST00000542555 WASHC4Q2M389 1173 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 TBC1D10BQ4KMP7 808 aaPredicted RBP10.47□□□□□ -0.73
CLPB-211ENST00000542555 TMEM259Q4ZIN3 620 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 HSP90AB3PQ58FF7 597 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 EFHC2Q5JST6 749 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 GNASQ5JWF2 1037 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 TTLL7Q6ZT98 887 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 ZSCAN10Q96SZ4 725 aaPredicted RBP10.47□□□□□ -0.73
CLPB-211ENST00000542555 ZIC5Q96T25 663 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 ESYT1Q9BSJ8 1104 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 PCGF6Q9BYE7 350 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 OSBPL3Q9H4L5 887 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 COL4A5P29400 1685 aa10.47□□□□□ -0.73
CLPB-211ENST00000542555 FAM155AB1AL88 458 aaPredicted RBP10.46□□□□□ -0.73
CLPB-211ENST00000542555 GNB5O14775 395 aa10.46□□□□□ -0.73
CLPB-211ENST00000542555 CENPCQ03188 943 aa10.46□□□□□ -0.73
CLPB-211ENST00000542555 DCTN1Q14203 1278 aa10.46□□□□□ -0.73
CLPB-211ENST00000542555 SLC10A5Q5PT55 438 aa10.46□□□□□ -0.73
CLPB-211ENST00000542555 ZNF34Q8IZ26 560 aa10.46□□□□□ -0.73
CLPB-211ENST00000542555 EYA3Q99504 573 aa10.46□□□□□ -0.73
CLPB-211ENST00000542555 KRTAP4-8Q9BYQ9 185 aa10.46□□□□□ -0.73
CLPB-211ENST00000542555 ABCC4O15439 1325 aa10.46□□□□□ -0.73
CLPB-211ENST00000542555 UBN2Q6ZU65 1347 aa10.45□□□□□ -0.74
CLPB-211ENST00000542555 TRAK2O60296 914 aa10.45□□□□□ -0.74
CLPB-211ENST00000542555 GRAPQ13588 217 aa10.45□□□□□ -0.74
CLPB-211ENST00000542555 TMEM214Q6NUQ4 689 aaKnown RBP10.45□□□□□ -0.74
CLPB-211ENST00000542555 GRAPLQ8TC17 118 aaPredicted RBP10.45□□□□□ -0.74
CLPB-211ENST00000542555 CSRNP1Q96S65 589 aa10.45□□□□□ -0.74
CLPB-211ENST00000542555 SUV39H2Q9H5I1 410 aa10.45□□□□□ -0.74
CLPB-211ENST00000542555 MIS18AQ9NYP9 233 aa10.45□□□□□ -0.74
CLPB-211ENST00000542555 ATXN7L1Q9ULK2 861 aaPredicted RBP10.45□□□□□ -0.74
CLPB-211ENST00000542555 C1QTNF9BB2RNN3 333 aa10.44□□□□□ -0.74
CLPB-211ENST00000542555 ADM5C9JUS6 153 aa10.44□□□□□ -0.74
CLPB-211ENST00000542555 THBS1P07996 1170 aa10.44□□□□□ -0.74
CLPB-211ENST00000542555 FKBP1BP68106 108 aa10.44□□□□□ -0.74
CLPB-211ENST00000542555 KIF4BQ2VIQ3 1234 aa10.44□□□□□ -0.74
CLPB-211ENST00000542555 PSMG3-AS1Q96PY0 264 aa10.44□□□□□ -0.74
CLPB-211ENST00000542555 RUBCNLQ9H714 662 aa10.44□□□□□ -0.74
CLPB-211ENST00000542555 NOP53Q9NZM5 478 aaKnown RBP10.44□□□□□ -0.74
CLPB-211ENST00000542555 GGA1Q9UJY5 639 aa10.44□□□□□ -0.74
CLPB-211ENST00000542555 PSMD14O00487 310 aa10.43□□□□□ -0.74
CLPB-211ENST00000542555 MYCP01106 439 aaPredicted RBP10.43□□□□□ -0.74
CLPB-211ENST00000542555 FBXO46Q6PJ61 603 aaPredicted RBP10.43□□□□□ -0.74
CLPB-211ENST00000542555 LINC00114Q6XXX2 140 aa10.43□□□□□ -0.74
CLPB-211ENST00000542555 SLCO4C1Q6ZQN7 724 aa10.43□□□□□ -0.74
CLPB-211ENST00000542555 ZC3H12CQ9C0D7 883 aaKnown RBP10.43□□□□□ -0.74
CLPB-211ENST00000542555 PNNQ9H307 717 aaKnown RBP10.43□□□□□ -0.74
CLPB-211ENST00000542555 TRMT112Q9UI30 125 aaKnown RBP10.43□□□□□ -0.74
CLPB-211ENST00000542555 PDE4DIPQ5VU43 2346 aa10.42□□□□□ -0.74
CLPB-211ENST00000542555 COL3A1P02461 1466 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms