RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 ZNF252P-AS1Q0IIN9 211 aa7.27□□□□□ -1.25
MDM2-228ENST00000542502 GPBAR1Q8TDU6 330 aa7.27□□□□□ -1.25
MDM2-228ENST00000542502 TNKS2Q9H2K2 1166 aa7.27□□□□□ -1.25
MDM2-228ENST00000542502 CACNA2D2Q9NY47 1150 aa7.27□□□□□ -1.25
MDM2-228ENST00000542502 TARBP1Q13395 1621 aaKnown RBP7.27□□□□□ -1.25
MDM2-228ENST00000542502 SOWAHDA6NJG2 315 aa7.26□□□□□ -1.25
MDM2-228ENST00000542502 FARP2O94887 1054 aaPredicted RBP7.26□□□□□ -1.25
MDM2-228ENST00000542502 ITIH2P19823 946 aa7.26□□□□□ -1.25
MDM2-228ENST00000542502 PDE4CQ08493 712 aa7.26□□□□□ -1.25
MDM2-228ENST00000542502 ANGEL2Q5VTE6 544 aaKnown RBP7.26□□□□□ -1.25
MDM2-228ENST00000542502 NXPE4Q6UWF7 544 aa7.26□□□□□ -1.25
MDM2-228ENST00000542502 TMEM40Q8WWA1 233 aa7.26□□□□□ -1.25
MDM2-228ENST00000542502 HEXIM2Q96MH2 286 aaKnown RBP7.26□□□□□ -1.25
MDM2-228ENST00000542502 SNX11Q9Y5W9 270 aa7.26□□□□□ -1.25
MDM2-228ENST00000542502 SYNJ1O43426 1573 aa7.25□□□□□ -1.25
MDM2-228ENST00000542502 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.25□□□□□ -1.25
MDM2-228ENST00000542502 SLC23A3Q6PIS1 610 aa7.25□□□□□ -1.25
MDM2-228ENST00000542502 FAM214BQ7L5A3 538 aa7.25□□□□□ -1.25
MDM2-228ENST00000542502 RETREG2Q8NC44 543 aa7.25□□□□□ -1.25
MDM2-228ENST00000542502 ACSBG1Q96GR2 724 aa7.25□□□□□ -1.25
MDM2-228ENST00000542502 KRTAP4-7Q9BYR0 210 aa7.25□□□□□ -1.25
MDM2-228ENST00000542502 DCTN4Q9UJW0 460 aa7.25□□□□□ -1.25
MDM2-228ENST00000542502 ABCA10Q8WWZ4 1543 aa7.25□□□□□ -1.25
MDM2-228ENST00000542502 DSC3Q14574 896 aa7.24□□□□□ -1.25
MDM2-228ENST00000542502 C3orf58Q8NDZ4 430 aa7.24□□□□□ -1.25
MDM2-228ENST00000542502 NECAB3Q96P71 396 aaPredicted RBP7.24□□□□□ -1.25
MDM2-228ENST00000542502 CBX8Q9HC52 389 aa7.24□□□□□ -1.25
MDM2-228ENST00000542502 GTF2IRD1Q9UHL9 959 aa7.24□□□□□ -1.25
MDM2-228ENST00000542502 PNMA6FA0A0J9YX94 578 aa7.23□□□□□ -1.25
MDM2-228ENST00000542502 IGF2BP3O00425 579 aaKnown RBP eCLIP7.23□□□□□ -1.25
MDM2-228ENST00000542502 NTF4P34130 210 aa7.23□□□□□ -1.25
MDM2-228ENST00000542502 PLCB3Q01970 1234 aa7.23□□□□□ -1.25
MDM2-228ENST00000542502 ZNF124Q15973 351 aa7.23□□□□□ -1.25
MDM2-228ENST00000542502 ENOX2Q16206 610 aaKnown RBP7.23□□□□□ -1.25
MDM2-228ENST00000542502 ASB11Q8WXH4 323 aa7.23□□□□□ -1.25
MDM2-228ENST00000542502 PRDM10Q9NQV6 1147 aa7.23□□□□□ -1.25
MDM2-228ENST00000542502 DBX1A6NMT0 343 aa7.22□□□□□ -1.25
MDM2-228ENST00000542502 TREHO43280 583 aa7.22□□□□□ -1.25
MDM2-228ENST00000542502 BMP6P22004 513 aa7.22□□□□□ -1.25
MDM2-228ENST00000542502 RING1Q06587 406 aa7.22□□□□□ -1.25
MDM2-228ENST00000542502 PPM1JQ5JR12 505 aa7.22□□□□□ -1.25
MDM2-228ENST00000542502 MPRIPQ6WCQ1 1025 aa7.22□□□□□ -1.25
MDM2-228ENST00000542502 FLAD1Q8NFF5 587 aa7.22□□□□□ -1.25
MDM2-228ENST00000542502 BIN2Q9UBW5 565 aaPredicted RBP7.22□□□□□ -1.25
MDM2-228ENST00000542502 SAMM50Q9Y512 469 aa7.22□□□□□ -1.25
MDM2-228ENST00000542502 CSADQ9Y600 493 aa7.22□□□□□ -1.25
MDM2-228ENST00000542502 GRIN2BQ13224 1484 aa7.22□□□□□ -1.25
MDM2-228ENST00000542502 KIF27Q86VH2 1401 aa7.21□□□□□ -1.25
MDM2-228ENST00000542502 ENC1O14682 589 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 TRIM37O94972 964 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 GSTT1P30711 240 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 PKN1Q16512 942 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 TPTE2Q6XPS3 522 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 KSR1Q8IVT5 923 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 SPACA3Q8IXA5 215 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 GRIN3AQ8TCU5 1115 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 CEP44Q9C0F1 390 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 SRCIN1Q9C0H9 1055 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 PICK1Q9NRD5 415 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 GAPVD1Q14C86 1478 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 RAD54L2Q9Y4B4 1467 aa7.21□□□□□ -1.26
MDM2-228ENST00000542502 EIF4G3O43432 1585 aaKnown RBP7.2□□□□□ -1.26
MDM2-228ENST00000542502 MAGI1Q96QZ7 1491 aaPredicted RBP7.2□□□□□ -1.26
MDM2-228ENST00000542502 FANCGO15287 622 aa7.2□□□□□ -1.26
MDM2-228ENST00000542502 IKZF1Q13422 519 aa7.2□□□□□ -1.26
MDM2-228ENST00000542502 NKPD1Q17RQ9 610 aa7.2□□□□□ -1.26
MDM2-228ENST00000542502 UBE3DQ7Z6J8 389 aa7.2□□□□□ -1.26
MDM2-228ENST00000542502 PRDM7Q9NQW5 492 aa7.2□□□□□ -1.26
MDM2-228ENST00000542502 PPM1HQ9ULR3 514 aa7.2□□□□□ -1.26
MDM2-228ENST00000542502 GNEQ9Y223 722 aaKnown RBP7.2□□□□□ -1.26
MDM2-228ENST00000542502 ERICH3Q5RHP9 1530 aa7.2□□□□□ -1.26
MDM2-228ENST00000542502 ABCA5Q8WWZ7 1642 aa7.19□□□□□ -1.26
MDM2-228ENST00000542502 EEA1Q15075 1411 aa7.19□□□□□ -1.26
MDM2-228ENST00000542502 DCDC2CA8MYV0 355 aa7.19□□□□□ -1.26
MDM2-228ENST00000542502 PAGE1O75459 146 aa7.19□□□□□ -1.26
MDM2-228ENST00000542502 ZP2Q05996 745 aa7.19□□□□□ -1.26
MDM2-228ENST00000542502 ZBTB37Q5TC79 503 aa7.19□□□□□ -1.26
MDM2-228ENST00000542502 SCARA3Q6AZY7 606 aa7.19□□□□□ -1.26
MDM2-228ENST00000542502 C12orf40Q86WS4 652 aa7.19□□□□□ -1.26
MDM2-228ENST00000542502 ZSWIM9Q86XI8 627 aa7.19□□□□□ -1.26
MDM2-228ENST00000542502 HOMEZQ8IX15 550 aa7.19□□□□□ -1.26
MDM2-228ENST00000542502 TDRD9Q8NDG6 1382 aaKnown RBP7.19□□□□□ -1.26
MDM2-228ENST00000542502 ZNF608Q9ULD9 1512 aaPredicted RBP7.18□□□□□ -1.26
MDM2-228ENST00000542502 GNAT3A8MTJ3 354 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 EOMESO95936 686 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 MAPK1P28482 360 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 CLCN7P51798 805 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 LRRC14Q15048 493 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 LLGL2Q6P1M3 1020 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 CDC37L1Q7L3B6 337 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 KCT2Q8NC54 265 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 FBF1Q8TES7 1133 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 SLC38A3Q99624 504 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 ARID3AQ99856 593 aa7.18□□□□□ -1.26
MDM2-228ENST00000542502 AQRO60306 1485 aaKnown RBP eCLIP7.17□□□□□ -1.266e-7■■■□□ 19.2
MDM2-228ENST00000542502 PBRM1Q86U86 1689 aa7.17□□□□□ -1.26
MDM2-228ENST00000542502 MESP2Q0VG99 397 aa7.17□□□□□ -1.26
MDM2-228ENST00000542502 ANKRD24Q8TF21 1146 aa7.17□□□□□ -1.26
MDM2-228ENST00000542502 FAM84AQ96KN4 292 aa7.17□□□□□ -1.26
MDM2-228ENST00000542502 OSBPL7Q9BZF2 842 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms