RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ADD2P35612 726 aa17.54■□□□□ 0.4
CNOT9-208ENST00000542068 KRBA2Q6ZNG9 492 aa17.54■□□□□ 0.4
CNOT9-208ENST00000542068 USP49Q70CQ1 688 aa17.54■□□□□ 0.4
CNOT9-208ENST00000542068 STAMQ92783 540 aa17.54■□□□□ 0.4
CNOT9-208ENST00000542068 NBPF3Q9H094 633 aa17.54■□□□□ 0.4
CNOT9-208ENST00000542068 ERICH2A1L162 156 aa17.53■□□□□ 0.4
CNOT9-208ENST00000542068 IGHMBP2P38935 993 aaKnown RBP17.53■□□□□ 0.4
CNOT9-208ENST00000542068 PPP2R3AQ06190 1150 aa17.53■□□□□ 0.4
CNOT9-208ENST00000542068 SUSD4Q5VX71 490 aa17.53■□□□□ 0.4
CNOT9-208ENST00000542068 SPATA5Q8NB90 893 aa17.53■□□□□ 0.4
CNOT9-208ENST00000542068 IKBKBO14920 756 aa17.53■□□□□ 0.4
CNOT9-208ENST00000542068 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
CNOT9-208ENST00000542068 SASH3O75995 380 aa17.53■□□□□ 0.4
CNOT9-208ENST00000542068 CYP19A1P11511 503 aaPredicted RBP17.53■□□□□ 0.4
CNOT9-208ENST00000542068 OAS2P29728 719 aaKnown RBP17.53■□□□□ 0.4
CNOT9-208ENST00000542068 NR5A1Q13285 461 aa17.53■□□□□ 0.4
CNOT9-208ENST00000542068 RASGRF1Q13972 1273 aa17.53■□□□□ 0.4
CNOT9-208ENST00000542068 DHX58Q96C10 678 aa17.53■□□□□ 0.4
CNOT9-208ENST00000542068 MFSD6Q6ZSS7 791 aa17.52■□□□□ 0.4
CNOT9-208ENST00000542068 SMYD4Q8IYR2 804 aaPredicted RBP17.52■□□□□ 0.4
CNOT9-208ENST00000542068 CCP110O43303 1012 aa17.52■□□□□ 0.4
CNOT9-208ENST00000542068 PTPAQ15257 358 aa17.52■□□□□ 0.4
CNOT9-208ENST00000542068 TTF1Q15361 905 aaPredicted RBP17.52■□□□□ 0.4
CNOT9-208ENST00000542068 PUM3Q15397 648 aaKnown RBP17.52■□□□□ 0.4
CNOT9-208ENST00000542068 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.52■□□□□ 0.4
CNOT9-208ENST00000542068 LAMA4Q16363 1823 aa17.52■□□□□ 0.39
CNOT9-208ENST00000542068 SOWAHDA6NJG2 315 aa17.52■□□□□ 0.39
CNOT9-208ENST00000542068 GYG1P46976 350 aa17.52■□□□□ 0.39
CNOT9-208ENST00000542068 MCM6Q14566 821 aa17.52■□□□□ 0.39
CNOT9-208ENST00000542068 MAN1B1Q9UKM7 699 aa17.52■□□□□ 0.39
CNOT9-208ENST00000542068 ZMYM6O95789 1325 aa17.51■□□□□ 0.39
CNOT9-208ENST00000542068 SMIM22K7EJ46 135 aa17.51■□□□□ 0.39
CNOT9-208ENST00000542068 CYP7A1P22680 504 aa17.51■□□□□ 0.39
CNOT9-208ENST00000542068 ZSWIM5Q9P217 1185 aa17.51■□□□□ 0.39
CNOT9-208ENST00000542068 TUBE1Q9UJT0 475 aa17.51■□□□□ 0.39
CNOT9-208ENST00000542068 PHLPP2Q6ZVD8 1323 aa17.51■□□□□ 0.39
CNOT9-208ENST00000542068 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
CNOT9-208ENST00000542068 SSRP1Q08945 709 aaKnown RBP17.51■□□□□ 0.39
CNOT9-208ENST00000542068 DDB1Q16531 1140 aa17.51■□□□□ 0.39
CNOT9-208ENST00000542068 DIS3L2Q8IYB7 885 aaKnown RBP17.51■□□□□ 0.39
CNOT9-208ENST00000542068 KRI1Q8N9T8 703 aaKnown RBP17.51■□□□□ 0.39
CNOT9-208ENST00000542068 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
CNOT9-208ENST00000542068 SH2B2O14492 632 aaPredicted RBP17.5■□□□□ 0.39
CNOT9-208ENST00000542068 ARHGAP6O43182 974 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 TEX33O43247 280 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 CDKL5O76039 1030 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 IRX5P78411 483 aaPredicted RBP17.5■□□□□ 0.39
CNOT9-208ENST00000542068 RESP18Q5W5W9 173 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 IFNL3Q8IZI9 196 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 SMARCE1Q969G3 411 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 UBAC1Q9BSL1 405 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 PARD6BQ9BYG5 372 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 UBN2Q6ZU65 1347 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 CPDO75976 1380 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 CYP2D7A0A087X1C5 515 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 CSF1RP07333 972 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 AKAP17AQ02040 695 aaKnown RBP17.5■□□□□ 0.39
CNOT9-208ENST00000542068 POSTNQ15063 836 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
CNOT9-208ENST00000542068 SAFBQ15424 915 aaKnown RBP eCLIP17.5■□□□□ 0.39
CNOT9-208ENST00000542068 SKIDA1Q1XH10 827 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 FAM182BQ5T319 152 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 TAF3Q5VWG9 929 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 LPIN2Q92539 896 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 MRC1P22897 1456 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 GOLGB1Q14789 3259 aaKnown RBP17.5■□□□□ 0.39
CNOT9-208ENST00000542068 COL5A2P05997 1499 aaPredicted RBP17.5■□□□□ 0.39
CNOT9-208ENST00000542068 SMC1AQ14683 1233 aaKnown RBP17.5■□□□□ 0.39
CNOT9-208ENST00000542068 WWC2Q6AWC2 1192 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 LCORLQ8N3X6 602 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 NACAP1Q9BZK3 213 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 MRPL44Q9H9J2 332 aaKnown RBP17.5■□□□□ 0.39
CNOT9-208ENST00000542068 HPSEQ9Y251 543 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 PCDHB6Q9Y5E3 794 aa17.5■□□□□ 0.39
CNOT9-208ENST00000542068 BAZ2BQ9UIF8 2168 aaKnown RBP17.5■□□□□ 0.39
CNOT9-208ENST00000542068 MAP3K14Q99558 947 aa17.49■□□□□ 0.39
CNOT9-208ENST00000542068 FAM53CQ9NYF3 392 aa17.49■□□□□ 0.39
CNOT9-208ENST00000542068 CABP5Q9NP86 173 aa17.49■□□□□ 0.39
CNOT9-208ENST00000542068 SOS2Q07890 1332 aaPredicted RBP17.49■□□□□ 0.39
CNOT9-208ENST00000542068 FAM205CA6NFA0 338 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 EFCAB8A8MWE9 144 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 LMAN1P49257 510 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
CNOT9-208ENST00000542068 SPECC1LQ69YQ0 1117 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 OXER1Q8TDS5 423 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 KCND1Q9NSA2 647 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 CALCOCO1Q9P1Z2 691 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 CUTAO60888 179 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 UQCRFS1P1P0C7P4 283 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 CRKLP46109 303 aaKnown RBP17.48■□□□□ 0.39
CNOT9-208ENST00000542068 TRIM22Q8IYM9 498 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 TC2NQ8N9U0 490 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 ARFGAP3Q9NP61 516 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 KCNQ2O43526 872 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 ZRANB2O95218 330 aaKnown RBP eCLIP17.48■□□□□ 0.39
CNOT9-208ENST00000542068 TBC1D8O95759 1140 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 RHOXF2BP0C7M4 288 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 CYP2C19P33261 490 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 WTAPQ15007 396 aa17.48■□□□□ 0.39
CNOT9-208ENST00000542068 CC2D1AQ6P1N0 951 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms