RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 OSBP2Q969R2 916 aa10.52□□□□□ -0.72
THBS3-211ENST00000541990 PUS7LQ9H0K6 701 aaKnown RBP10.52□□□□□ -0.72
THBS3-211ENST00000541990 INCENPQ9NQS7 918 aa10.52□□□□□ -0.72
THBS3-211ENST00000541990 DENND2AQ9ULE3 1009 aa10.52□□□□□ -0.72
THBS3-211ENST00000541990 M0R2C6 588 aa10.52□□□□□ -0.73
THBS3-211ENST00000541990 PFKFB2O60825 505 aa10.52□□□□□ -0.73
THBS3-211ENST00000541990 CIAO1O76071 339 aa10.52□□□□□ -0.73
THBS3-211ENST00000541990 RPS8P62241 208 aaKnown RBP10.52□□□□□ -0.73
THBS3-211ENST00000541990 HSP90AA4PQ58FG1 418 aa10.52□□□□□ -0.73
THBS3-211ENST00000541990 UBXN6Q9BZV1 441 aa10.52□□□□□ -0.73
THBS3-211ENST00000541990 KIAA1468Q9P260 1216 aa10.52□□□□□ -0.73
THBS3-211ENST00000541990 IMPACTQ9P2X3 320 aa10.52□□□□□ -0.73
THBS3-211ENST00000541990 REXO1L1PQ8IX06 675 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 MIGA1Q8NAN2 632 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 MNS1Q8NEH6 495 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 WDR24Q96S15 920 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 H3BQF6 201 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 FDPSP14324 419 aaKnown RBP10.51□□□□□ -0.73
THBS3-211ENST00000541990 FANCCQ00597 558 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 TEX35Q5T0J7 233 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 NAA16Q6N069 864 aaPredicted RBP10.51□□□□□ -0.73
THBS3-211ENST00000541990 NKX2-3Q8TAU0 364 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 ANKIB1Q9P2G1 1089 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 MROH7-TTC4A0A0A0MT08 1334 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 VWA3AA6NCI4 1184 aa10.51□□□□□ -0.73
THBS3-211ENST00000541990 CC2D1AQ6P1N0 951 aaPredicted RBP10.51□□□□□ -0.73
THBS3-211ENST00000541990 NAT10Q9H0A0 1025 aaKnown RBP10.51□□□□□ -0.73
THBS3-211ENST00000541990 SALL1Q9NSC2 1324 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 SMC1AQ14683 1233 aaKnown RBP10.5□□□□□ -0.73
THBS3-211ENST00000541990 PUM3Q15397 648 aaKnown RBP10.5□□□□□ -0.73
THBS3-211ENST00000541990 SLC9C2Q5TAH2 1124 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 C10orf67Q8IYJ2 551 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 PNPLA7Q6ZV29 1317 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 PHLPP2Q6ZVD8 1323 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 SBF2Q86WG5 1849 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 POLRMTO00411 1230 aaKnown RBP10.5□□□□□ -0.73
THBS3-211ENST00000541990 CHRNA5P30532 468 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 KBTBD3Q8NAB2 608 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 LINC00301Q8NCQ3 95 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 CHMP4CQ96CF2 233 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 ZSWIM4Q9H7M6 989 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 PPP1R1BQ9UD71 204 aaPredicted RBP10.5□□□□□ -0.73
THBS3-211ENST00000541990 AKAP2Q9Y2D5 859 aa10.5□□□□□ -0.73
THBS3-211ENST00000541990 RIMBP2O15034 1052 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 EVX2Q03828 476 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 GNL2Q13823 731 aaKnown RBP10.49□□□□□ -0.73
THBS3-211ENST00000541990 KRT32Q14532 448 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 VPS37DQ86XT2 251 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 AKT1S1Q96B36 256 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 KIF28PB7ZC32 967 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 PRKAB2O43741 272 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 TFRCP02786 760 aaKnown RBP10.49□□□□□ -0.73
THBS3-211ENST00000541990 FGFR2P21802 821 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 ZSCAN26Q16670 478 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 SLC27A3Q5K4L6 730 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 CREBRFQ8IUR6 639 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 LPIN2Q92539 896 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 ZNF396Q96N95 335 aaPredicted RBP10.49□□□□□ -0.73
THBS3-211ENST00000541990 CDC5LQ99459 802 aaKnown RBP10.49□□□□□ -0.73
THBS3-211ENST00000541990 INTS13Q9NVM9 706 aa10.49□□□□□ -0.73
THBS3-211ENST00000541990 ARGLU1Q9NWB6 273 aaPredicted RBP10.49□□□□□ -0.73
THBS3-211ENST00000541990 C4BP0C0L5 1744 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 A0A0U1RQJ8 604 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 SLC3A2P08195 630 aaKnown RBP10.48□□□□□ -0.73
THBS3-211ENST00000541990 TPM4P67936 248 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 STK38Q15208 465 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 SF3B3Q15393 1217 aaKnown RBP10.48□□□□□ -0.73
THBS3-211ENST00000541990 GRIK5Q16478 980 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 FOXR1Q6PIV2 292 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 TMEM139Q8IV31 216 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 ATRIPQ8WXE1 791 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 ZNF622Q969S3 477 aaKnown RBP eCLIP10.48□□□□□ -0.737e-6■■■■□ 22.7
THBS3-211ENST00000541990 IRX2Q9BZI1 471 aaPredicted RBP10.48□□□□□ -0.73
THBS3-211ENST00000541990 RSPH14Q9UHP6 348 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 MYH15Q9Y2K3 1946 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 MAST3O60307 1309 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 NHSQ6T4R5 1651 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 MYO1CO00159 1063 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 ZNF202O95125 648 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 MARCKSP29966 332 aaPredicted RBP10.48□□□□□ -0.73
THBS3-211ENST00000541990 PDIA3P30101 505 aaKnown RBP10.48□□□□□ -0.73
THBS3-211ENST00000541990 LMAN1P49257 510 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 FAM193AP78312 1265 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 ADALQ6DHV7 355 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 TOGARAM2Q6ZUX3 1019 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 ADGRA1Q86SQ6 560 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 MAGEB6Q8N7X4 407 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 DESI2Q9BSY9 194 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 PARD6BQ9BYG5 372 aa10.48□□□□□ -0.73
THBS3-211ENST00000541990 EFCAB8A8MWE9 144 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 WDHD1O75717 1129 aaPredicted RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 ZBTB7AO95365 584 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 APPP05067 770 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 SLC5A1P13866 664 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 PFKFB1P16118 471 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 NLRP12P59046 1061 aa10.47□□□□□ -0.73
THBS3-211ENST00000541990 SF3A1Q15459 793 aaKnown RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 LRRFIP1Q32MZ4 808 aaKnown RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 DHX32Q7L7V1 743 aaKnown RBP10.47□□□□□ -0.73
THBS3-211ENST00000541990 SPATA5Q8NB90 893 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms