RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 WIZO95785 1651 aa5.85□□□□□ -1.47
SNHG1-218ENST00000541615 LRRD1A4D1F6 860 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 LRRIQ3A6PVS8 624 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-218ENST00000541615 TBKBP1A7MCY6 615 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 STXBP3O00186 592 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 LSM1O15116 133 aaKnown RBP5.84□□□□□ -1.47
SNHG1-218ENST00000541615 WDR46O15213 610 aaKnown RBP5.84□□□□□ -1.47
SNHG1-218ENST00000541615 MEFVO15553 781 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-218ENST00000541615 MGRN1O60291 552 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 ZEB2O60315 1214 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 SMIM24O75264 130 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 PEX14O75381 377 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 TADA3O75528 432 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 RASSF9O75901 435 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 SMNDC1O75940 238 aaKnown RBP eCLIP5.84□□□□□ -1.473e-14■■■■■ 31.4
SNHG1-218ENST00000541615 NPTXRO95502 500 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 IGHDP01880 384 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 PARP1P09874 1014 aaKnown RBP5.84□□□□□ -1.47
SNHG1-218ENST00000541615 SKIP12755 728 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 CCNCP24863 283 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 KIF5BP33176 963 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 UBE2HP62256 183 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 NSUN2Q08J23 767 aaKnown RBP eCLIP5.84□□□□□ -1.47
SNHG1-218ENST00000541615 WTAPQ15007 396 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 MAP7D1Q3KQU3 841 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 BOLA3Q53S33 107 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 FBXW10Q5XX13 1052 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 PACS1Q6VY07 963 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 BICDL1Q6ZP65 573 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 CDC37L1Q7L3B6 337 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 ITPRIPQ8IWB1 547 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 CCAR2Q8N163 923 aaKnown RBP5.84□□□□□ -1.47
SNHG1-218ENST00000541615 TTC39CQ8N584 583 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 KRI1Q8N9T8 703 aaKnown RBP5.84□□□□□ -1.47
SNHG1-218ENST00000541615 SMC1BQ8NDV3 1235 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 CNNM3Q8NE01 707 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 CERKQ8TCT0 537 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 NEK9Q8TD19 979 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 TAF4BQ92750 862 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 GOLGA1Q92805 767 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 SLC35B4Q969S0 331 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 GFM2Q969S9 779 aaKnown RBP5.84□□□□□ -1.47
SNHG1-218ENST00000541615 EVI5LQ96CN4 794 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 GCC1Q96CN9 775 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 OPTNQ96CV9 577 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 INTS4Q96HW7 963 aaKnown RBP5.84□□□□□ -1.47
SNHG1-218ENST00000541615 GSDMAQ96QA5 445 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 PARD6BQ9BYG5 372 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 SYNCQ9H7C4 482 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 IFT122Q9HBG6 1241 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 SENP2Q9HC62 589 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 COMMD8Q9NX08 183 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 IL20Q9NYY1 176 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 SLAIN2Q9P270 581 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 SEL1LQ9UBV2 794 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 TUBGCP4Q9UGJ1 667 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 TSKSQ9UJT2 592 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 SATB2Q9UPW6 733 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 HPS5Q9UPZ3 1129 aa5.84□□□□□ -1.47
SNHG1-218ENST00000541615 RTL1A6NKG5 1358 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 PIK3R4Q99570 1358 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 TRIM64CA6NLI5 447 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 M0R2C6 588 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 MAP3K7O43318 606 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 DIAPH2O60879 1101 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 CLASP2O75122 1294 aaKnown RBP5.83□□□□□ -1.48
SNHG1-218ENST00000541615 WDHD1O75717 1129 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-218ENST00000541615 BBOX1O75936 387 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 EIF2S1P05198 315 aaKnown RBP5.83□□□□□ -1.48
SNHG1-218ENST00000541615 PTGS1P23219 599 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 S100A1P23297 94 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 BDNFP23560 247 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 TCF7P36402 384 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-218ENST00000541615 TXLNAP40222 546 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 ABL2P42684 1182 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 AARSP49588 968 aaKnown RBP eCLIP5.83□□□□□ -1.485e-21■□□□□ 9.8
SNHG1-218ENST00000541615 GNAI1P63096 354 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 PDE4BQ07343 736 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 TUBA3CQ13748 450 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 BYSLQ13895 437 aaKnown RBP5.83□□□□□ -1.48
SNHG1-218ENST00000541615 SEPT6Q14141 434 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 LBRQ14739 615 aaKnown RBP5.83□□□□□ -1.48
SNHG1-218ENST00000541615 NAA30Q147X3 362 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-218ENST00000541615 MYBPC3Q14896 1274 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 ARHGEF6Q15052 776 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 LONRF2Q1L5Z9 754 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 TSR1Q2NL82 804 aaKnown RBP5.83□□□□□ -1.48
SNHG1-218ENST00000541615 GNPTABQ3T906 1256 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 CCDC153Q494R4 210 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 BMP2KLQ5H9B9 411 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 EMC10Q5UCC4 262 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 DUSP27Q5VZP5 1158 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 CREB3L3Q68CJ9 461 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 SARM1Q6SZW1 724 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 ATF7IPQ6VMQ6 1270 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 FCHSD1Q86WN1 690 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 PLA2G4DQ86XP0 818 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 LRRC8AQ8IWT6 810 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 CCDC155Q8N6L0 562 aa5.83□□□□□ -1.48
SNHG1-218ENST00000541615 ATP6V0A1Q93050 837 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms