RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 DOCK1Q14185 1865 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 ADCY3O60266 1144 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 SURF6O75683 361 aaKnown RBP16.23■□□□□ 0.19
PRPF19-206ENST00000541371 GJA8P48165 433 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 ATP8B2P98198 1209 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 POLA2Q14181 598 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 TNNI3KQ59H18 835 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 TREML2Q5T2D2 321 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 NAA16Q6N069 864 aaPredicted RBP16.23■□□□□ 0.19
PRPF19-206ENST00000541371 ANKRD13CQ8N6S4 541 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 PROCA1Q8NCQ7 364 aaPredicted RBP16.23■□□□□ 0.19
PRPF19-206ENST00000541371 ZNF280CQ8ND82 737 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 SH3RF3Q8TEJ3 882 aaPredicted RBP16.23■□□□□ 0.19
PRPF19-206ENST00000541371 DPF3Q92784 378 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 HERC5Q9UII4 1024 aaKnown RBP16.23■□□□□ 0.19
PRPF19-206ENST00000541371 FPGT-TNNI3KV9GXZ4 949 aa16.23■□□□□ 0.19
PRPF19-206ENST00000541371 COL2A1P02458 1487 aaPredicted RBP16.22■□□□□ 0.19
PRPF19-206ENST00000541371 CENPFP49454 3210 aa16.22■□□□□ 0.19
PRPF19-206ENST00000541371 H0YGN5 161 aa16.22■□□□□ 0.19
PRPF19-206ENST00000541371 PLCG2P16885 1265 aa16.22■□□□□ 0.19
PRPF19-206ENST00000541371 CAP2P40123 477 aa16.22■□□□□ 0.19
PRPF19-206ENST00000541371 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.19
PRPF19-206ENST00000541371 FTSJ3Q8IY81 847 aaKnown RBP16.22■□□□□ 0.19
PRPF19-206ENST00000541371 SSH3Q8TE77 659 aa16.22■□□□□ 0.19
PRPF19-206ENST00000541371 COA7Q96BR5 231 aa16.22■□□□□ 0.19
PRPF19-206ENST00000541371 DBNDD2Q9BQY9 259 aa16.22■□□□□ 0.19
PRPF19-206ENST00000541371 DHX36Q9H2U1 1008 aaKnown RBP16.22■□□□□ 0.19
PRPF19-206ENST00000541371 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
PRPF19-206ENST00000541371 AATFQ9NY61 560 aaKnown RBP eCLIP16.22■□□□□ 0.19
PRPF19-206ENST00000541371 PI4KBQ9UBF8 816 aa16.22■□□□□ 0.19
PRPF19-206ENST00000541371 TAOK2Q9UL54 1235 aa16.22■□□□□ 0.19
PRPF19-206ENST00000541371 COLQQ9Y215 455 aaPredicted RBP16.22■□□□□ 0.19
PRPF19-206ENST00000541371 USP17L5A8MUK1 530 aa16.21■□□□□ 0.19
PRPF19-206ENST00000541371 HMGCS2P54868 508 aa16.21■□□□□ 0.19
PRPF19-206ENST00000541371 PXYLP1Q8TE99 480 aa16.21■□□□□ 0.19
PRPF19-206ENST00000541371 U2AF1L4Q8WU68 220 aaKnown RBP16.21■□□□□ 0.19
PRPF19-206ENST00000541371 HTATIP2Q9BUP3 242 aa16.21■□□□□ 0.19
PRPF19-206ENST00000541371 UNC93B1Q9H1C4 597 aa16.21■□□□□ 0.19
PRPF19-206ENST00000541371 ELNP15502 786 aa16.2■□□□□ 0.18
PRPF19-206ENST00000541371 GCLCP48506 637 aaPredicted RBP16.2■□□□□ 0.18
PRPF19-206ENST00000541371 PPP4CP60510 307 aa16.2■□□□□ 0.18
PRPF19-206ENST00000541371 IRF5Q13568 498 aa16.2■□□□□ 0.18
PRPF19-206ENST00000541371 RRP1BQ14684 758 aaKnown RBP16.2■□□□□ 0.18
PRPF19-206ENST00000541371 FAM110CQ1W6H9 321 aa16.2■□□□□ 0.18
PRPF19-206ENST00000541371 MAPKAPK5Q8IW41 473 aa16.2■□□□□ 0.18
PRPF19-206ENST00000541371 ITPRIPQ8IWB1 547 aa16.2■□□□□ 0.18
PRPF19-206ENST00000541371 TGFBRAP1Q8WUH2 860 aa16.2■□□□□ 0.18
PRPF19-206ENST00000541371 TRIM34Q9BYJ4 488 aa16.2■□□□□ 0.18
PRPF19-206ENST00000541371 C1orf115Q9H7X2 142 aa16.2■□□□□ 0.18
PRPF19-206ENST00000541371 PHIPQ8WWQ0 1821 aa16.19■□□□□ 0.18
PRPF19-206ENST00000541371 MKI67P46013 3256 aaKnown RBP16.19■□□□□ 0.18
PRPF19-206ENST00000541371 MGAMO43451 1857 aa16.19■□□□□ 0.18
PRPF19-206ENST00000541371 SGPL1O95470 568 aa16.19■□□□□ 0.18
PRPF19-206ENST00000541371 INHAP05111 366 aa16.19■□□□□ 0.18
PRPF19-206ENST00000541371 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
PRPF19-206ENST00000541371 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
PRPF19-206ENST00000541371 FOXP4Q8IVH2 680 aaPredicted RBP16.19■□□□□ 0.18
PRPF19-206ENST00000541371 CRACR2BQ8N4Y2 399 aaPredicted RBP16.19■□□□□ 0.18
PRPF19-206ENST00000541371 ZNF512BQ96KM6 892 aaPredicted RBP16.19■□□□□ 0.18
PRPF19-206ENST00000541371 PTPRFP10586 1907 aa16.19■□□□□ 0.18
PRPF19-206ENST00000541371 BRCA2P51587 3418 aa16.19■□□□□ 0.18
PRPF19-206ENST00000541371 IGSF3O75054 1194 aa16.18■□□□□ 0.18
PRPF19-206ENST00000541371 FARP2O94887 1054 aaPredicted RBP16.18■□□□□ 0.18
PRPF19-206ENST00000541371 ASNSP08243 561 aa16.18■□□□□ 0.18
PRPF19-206ENST00000541371 ZAP70P43403 619 aa16.18■□□□□ 0.18
PRPF19-206ENST00000541371 SH3D19Q5HYK7 790 aa16.18■□□□□ 0.18
PRPF19-206ENST00000541371 TMOD4Q9NZQ9 345 aa16.18■□□□□ 0.18
PRPF19-206ENST00000541371 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
PRPF19-206ENST00000541371 FLT1P17948 1338 aa16.18■□□□□ 0.18
PRPF19-206ENST00000541371 ZBTB7BO15156 539 aaPredicted RBP16.17■□□□□ 0.18
PRPF19-206ENST00000541371 TFRCP02786 760 aaKnown RBP16.17■□□□□ 0.18
PRPF19-206ENST00000541371 CAPN2P17655 700 aa16.17■□□□□ 0.18
PRPF19-206ENST00000541371 FXR1P51114 621 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRPF19-206ENST00000541371 UBE2Q1Q7Z7E8 422 aa16.17■□□□□ 0.18
PRPF19-206ENST00000541371 ADGRA1Q86SQ6 560 aa16.17■□□□□ 0.18
PRPF19-206ENST00000541371 WDR18Q9BV38 432 aa16.17■□□□□ 0.18
PRPF19-206ENST00000541371 ASCC2Q9H1I8 757 aaPredicted RBP16.17■□□□□ 0.18
PRPF19-206ENST00000541371 PIH1D3Q9NQM4 214 aaKnown RBP16.17■□□□□ 0.18
PRPF19-206ENST00000541371 PALD1Q9ULE6 856 aa16.17■□□□□ 0.18
PRPF19-206ENST00000541371 HLA-DOAP06340 250 aa16.16■□□□□ 0.18
PRPF19-206ENST00000541371 CYP7A1P22680 504 aa16.16■□□□□ 0.18
PRPF19-206ENST00000541371 BACE1P56817 501 aa16.16■□□□□ 0.18
PRPF19-206ENST00000541371 IRX3P78415 501 aaPredicted RBP16.16■□□□□ 0.18
PRPF19-206ENST00000541371 MTMR2Q13614 643 aa16.16■□□□□ 0.18
PRPF19-206ENST00000541371 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
PRPF19-206ENST00000541371 DEFB118Q96PH6 123 aa16.16■□□□□ 0.18
PRPF19-206ENST00000541371 CCDC8Q9H0W5 538 aaPredicted RBP16.16■□□□□ 0.18
PRPF19-206ENST00000541371 DBNLQ9UJU6 430 aaKnown RBP16.16■□□□□ 0.18
PRPF19-206ENST00000541371 NR2E3Q9Y5X4 410 aa16.16■□□□□ 0.18
PRPF19-206ENST00000541371 C19orf81C9J6K1 198 aa16.15■□□□□ 0.18
PRPF19-206ENST00000541371 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
PRPF19-206ENST00000541371 DYNLL1P63167 89 aaKnown RBP16.15■□□□□ 0.18
PRPF19-206ENST00000541371 METTL16Q86W50 562 aaKnown RBP16.15■□□□□ 0.18
PRPF19-206ENST00000541371 EAF2Q96CJ1 260 aaPredicted RBP16.15■□□□□ 0.18
PRPF19-206ENST00000541371 DNAJC18Q9H819 358 aa16.15■□□□□ 0.18
PRPF19-206ENST00000541371 GINM1Q9NU53 330 aa16.15■□□□□ 0.18
PRPF19-206ENST00000541371 TLR7Q9NYK1 1049 aaKnown RBP16.15■□□□□ 0.18
PRPF19-206ENST00000541371 SAP30BPQ9UHR5 308 aaKnown RBP16.15■□□□□ 0.18
PRPF19-206ENST00000541371 GDF11O95390 407 aa16.14■□□□□ 0.17
PRPF19-206ENST00000541371 RLBP1P12271 317 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms