RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 PYGBP11216 843 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 NEK2P51955 445 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 ZBED6P86452 979 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 CNGA3Q16281 694 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 SKOR2Q2VWA4 1001 aaPredicted RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 ERMNQ8TAM6 284 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 SUN5Q8TC36 379 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 RBM17Q96I25 401 aaKnown RBP7.03□□□□□ -1.28
LMO3-225ENST00000541295 QPCTLQ9NXS2 382 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 TBK1Q9UHD2 729 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 TRIM35Q9UPQ4 493 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.03□□□□□ -1.28
LMO3-225ENST00000541295 TTC21AQ8NDW8 1320 aa7.03□□□□□ -1.28
LMO3-225ENST00000541295 FAM83GA6ND36 823 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 KIF5BP33176 963 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 SNX16P57768 344 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 NUCB1Q02818 461 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 LAMB3Q13751 1172 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 PTPN14Q15678 1187 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 MAPRE1Q15691 268 aaKnown RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 PKN1Q16512 942 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 PANK1Q8TE04 598 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 RNPC3Q96LT9 517 aaKnown RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 EPAS1Q99814 870 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 KIAA1468Q9P260 1216 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 LZTS1Q9Y250 596 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 COG6Q9Y2V7 657 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 LUC7L2Q9Y383 392 aaKnown RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 COL4A3BPQ9Y5P4 624 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 PNPLA6Q8IY17 1366 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 SGTAO43765 313 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 RNASEH2AO75792 299 aaKnown RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 PSMD7P51665 324 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 B4GALNT2Q8NHY0 566 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 GIPC2Q8TF65 315 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 EZH1Q92800 747 aaPredicted RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 JARID2Q92833 1246 aaPredicted RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 FAM107BQ9H098 131 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 RABEP2Q9H5N1 569 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 ANKIB1Q9P2G1 1089 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 ITGB1BP2Q9UKP3 347 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 CDK12Q9NYV4 1490 aaPredicted RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 TOPAZ1Q8N9V7 1692 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 OVOS2A0A0J9YW53 1432 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 OVOS2Q6IE36 1432 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 AATKQ6ZMQ8 1374 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 VIL1P09327 827 aaKnown RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 CSE1LP55060 971 aaKnown RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 ARHGEF6Q15052 776 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 TRMT2AQ8IZ69 625 aaKnown RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 MIGA1Q8NAN2 632 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 GSDMBQ8TAX9 411 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 DDX17Q92841 729 aaKnown RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 CENPOQ9BU64 300 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 OSBPL10Q9BXB5 764 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 TANGO6Q9C0B7 1094 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 SENP2Q9HC62 589 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 KMT5AQ9NQR1 393 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 IFT57Q9NWB7 429 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 XPO7Q9UIA9 1087 aaKnown RBP7.02□□□□□ -1.29
LMO3-225ENST00000541295 TNNQ9UQP3 1299 aa7.02□□□□□ -1.29
LMO3-225ENST00000541295 NALCNQ8IZF0 1738 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 ADGRL3Q9HAR2 1447 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.01□□□□□ -1.29
LMO3-225ENST00000541295 ZMYND10O75800 440 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 ATF3P18847 181 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 MCM4P33991 863 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 PDE4BQ07343 736 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 RNF187Q5TA31 235 aaPredicted RBP7.01□□□□□ -1.29
LMO3-225ENST00000541295 WDR75Q8IWA0 830 aaKnown RBP7.01□□□□□ -1.29
LMO3-225ENST00000541295 CHPFQ8IZ52 775 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 USHBP1Q8N6Y0 703 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 KRI1Q8N9T8 703 aaKnown RBP7.01□□□□□ -1.29
LMO3-225ENST00000541295 C3orf20Q8ND61 904 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 CTCFLQ8NI51 663 aaPredicted RBP7.01□□□□□ -1.29
LMO3-225ENST00000541295 FAM81AQ8TBF8 368 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 NUP133Q8WUM0 1156 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 ANKRD7Q92527 254 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 SAAL1Q96ER3 474 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 DISC1Q9NRI5 854 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 SSX2IPQ9Y2D8 614 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 WDR37Q9Y2I8 494 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 SMTNL1A8MU46 457 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 BBOX1O75936 387 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 ZFXP17010 805 aaPredicted RBP7.01□□□□□ -1.29
LMO3-225ENST00000541295 PACS2Q86VP3 889 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 IQCA1Q86XH1 822 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
LMO3-225ENST00000541295 WDR66Q8TBY9 1149 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 HPS3Q969F9 1004 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 POLG2Q9UHN1 485 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 ANKARQ7Z5J8 1434 aa7.01□□□□□ -1.29
LMO3-225ENST00000541295 SGSM2O43147 1006 aa7□□□□□ -1.29
LMO3-225ENST00000541295 OPA1O60313 960 aa7□□□□□ -1.29
LMO3-225ENST00000541295 ONECUT3O60422 494 aaPredicted RBP7□□□□□ -1.29
LMO3-225ENST00000541295 ATP6V1G1O75348 118 aa7□□□□□ -1.29
LMO3-225ENST00000541295 ARPC4P59998 168 aa7□□□□□ -1.29
LMO3-225ENST00000541295 POLR2FP61218 127 aaKnown RBP7□□□□□ -1.29
LMO3-225ENST00000541295 FKBP15Q5T1M5 1219 aa7□□□□□ -1.29
LMO3-225ENST00000541295 CCSAPQ6IQ19 270 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms