RNA–Protein interactions for RNA: ENST00000541132.1

RAD9A-206, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 3

Gene RAD9A, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-206ENST00000541132 AKAP2Q9Y2D5 859 aa22.27■■□□□ 1.16
RAD9A-206ENST00000541132 LOC285556D6RIA3 1793 aa22.26■■□□□ 1.15
RAD9A-206ENST00000541132 A0A1B0GUL7 405 aa22.26■■□□□ 1.15
RAD9A-206ENST00000541132 SOX1O00570 391 aaPredicted RBP22.26■■□□□ 1.15
RAD9A-206ENST00000541132 GCLCP48506 637 aaPredicted RBP22.26■■□□□ 1.15
RAD9A-206ENST00000541132 NPM3O75607 178 aaKnown RBP22.25■■□□□ 1.15
RAD9A-206ENST00000541132 PABPC4Q13310 644 aaKnown RBP eCLIP22.25■■□□□ 1.15
RAD9A-206ENST00000541132 MVPQ14764 893 aaKnown RBP22.25■■□□□ 1.15
RAD9A-206ENST00000541132 ZNF280CQ8ND82 737 aa22.25■■□□□ 1.15
RAD9A-206ENST00000541132 DIS3LQ8TF46 1054 aaKnown RBP22.25■■□□□ 1.15
RAD9A-206ENST00000541132 LRCH3Q96II8 777 aa22.25■■□□□ 1.15
RAD9A-206ENST00000541132 API5Q9BZZ5 524 aaKnown RBP22.25■■□□□ 1.15
RAD9A-206ENST00000541132 HMGCRP04035 888 aa22.24■■□□□ 1.15
RAD9A-206ENST00000541132 LDHCP07864 332 aa22.24■■□□□ 1.15
RAD9A-206ENST00000541132 HMGCS2P54868 508 aa22.24■■□□□ 1.15
RAD9A-206ENST00000541132 GSTO1P78417 241 aa22.24■■□□□ 1.15
RAD9A-206ENST00000541132 TFCP2Q12800 502 aa22.24■■□□□ 1.15
RAD9A-206ENST00000541132 CDCA7LQ96GN5 454 aa22.24■■□□□ 1.15
RAD9A-206ENST00000541132 NEUROD6Q96NK8 337 aa22.24■■□□□ 1.15
RAD9A-206ENST00000541132 MEIS3Q99687 375 aa22.24■■□□□ 1.15
RAD9A-206ENST00000541132 TBC1D2Q9BYX2 928 aa22.24■■□□□ 1.15
RAD9A-206ENST00000541132 DLL1O00548 723 aa22.23■■□□□ 1.15
RAD9A-206ENST00000541132 CAP2P40123 477 aa22.23■■□□□ 1.15
RAD9A-206ENST00000541132 C7orf61Q8IZ16 206 aa22.23■■□□□ 1.15
RAD9A-206ENST00000541132 ANKLE1Q8NAG6 615 aa22.23■■□□□ 1.15
RAD9A-206ENST00000541132 ZNF384Q8TF68 577 aa22.23■■□□□ 1.15
RAD9A-206ENST00000541132 MAP4K4O95819 1239 aaPredicted RBP22.22■■□□□ 1.15
RAD9A-206ENST00000541132 NSUN4Q96CB9 384 aaKnown RBP22.22■■□□□ 1.15
RAD9A-206ENST00000541132 ASCC2Q9H1I8 757 aaPredicted RBP22.22■■□□□ 1.15
RAD9A-206ENST00000541132 HMX1Q9NP08 348 aaPredicted RBP22.22■■□□□ 1.15
RAD9A-206ENST00000541132 HMG20BQ9P0W2 317 aa22.22■■□□□ 1.15
RAD9A-206ENST00000541132 RPTORQ8N122 1335 aa22.22■■□□□ 1.15
RAD9A-206ENST00000541132 USP17L5A8MUK1 530 aa22.21■■□□□ 1.15
RAD9A-206ENST00000541132 SRGAP3O43295 1099 aa22.21■■□□□ 1.15
RAD9A-206ENST00000541132 GORABQ5T7V8 394 aa22.21■■□□□ 1.15
RAD9A-206ENST00000541132 TBC1D9Q6ZT07 1266 aa22.21■■□□□ 1.15
RAD9A-206ENST00000541132 SPATA5Q8NB90 893 aa22.21■■□□□ 1.15
RAD9A-206ENST00000541132 AS3MTQ9HBK9 375 aa22.21■■□□□ 1.15
RAD9A-206ENST00000541132 RAI14Q9P0K7 980 aa22.21■■□□□ 1.15
RAD9A-206ENST00000541132 GJD2Q9UKL4 321 aa22.21■■□□□ 1.15
RAD9A-206ENST00000541132 ZMYND8Q9ULU4 1186 aaPredicted RBP22.21■■□□□ 1.15
RAD9A-206ENST00000541132 COL2A1P02458 1487 aaPredicted RBP22.21■■□□□ 1.15
RAD9A-206ENST00000541132 PLXNB2O15031 1838 aa22.2■■□□□ 1.14
RAD9A-206ENST00000541132 TRIM32Q13049 653 aa22.2■■□□□ 1.14
RAD9A-206ENST00000541132 RRP1BQ14684 758 aaKnown RBP22.2■■□□□ 1.14
RAD9A-206ENST00000541132 GDF15Q99988 308 aa22.2■■□□□ 1.14
RAD9A-206ENST00000541132 NBPF3Q9H094 633 aa22.2■■□□□ 1.14
RAD9A-206ENST00000541132 DDX60LQ5H9U9 1706 aaKnown RBP22.2■■□□□ 1.14
RAD9A-206ENST00000541132 BMP8BP34820 402 aa22.19■■□□□ 1.14
RAD9A-206ENST00000541132 SH3D19Q5HYK7 790 aa22.19■■□□□ 1.14
RAD9A-206ENST00000541132 PI16Q6UXB8 463 aa22.19■■□□□ 1.14
RAD9A-206ENST00000541132 TEX11Q8IYF3 940 aa22.19■■□□□ 1.14
RAD9A-206ENST00000541132 GNAI3P08754 354 aa22.18■■□□□ 1.14
RAD9A-206ENST00000541132 CT47B1P0C2W7 299 aaPredicted RBP22.18■■□□□ 1.14
RAD9A-206ENST00000541132 C11orf49Q9H6J7 331 aa22.18■■□□□ 1.14
RAD9A-206ENST00000541132 HERC5Q9UII4 1024 aaKnown RBP22.18■■□□□ 1.14
RAD9A-206ENST00000541132 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.18■■□□□ 1.14
RAD9A-206ENST00000541132 CYP2B6P20813 491 aa22.17■■□□□ 1.14
RAD9A-206ENST00000541132 IRX3P78415 501 aaPredicted RBP22.17■■□□□ 1.14
RAD9A-206ENST00000541132 NOL10Q9BSC4 688 aaKnown RBP22.17■■□□□ 1.14
RAD9A-206ENST00000541132 LRP2BPQ9P2M1 347 aa22.17■■□□□ 1.14
RAD9A-206ENST00000541132 MORF4L1Q9UBU8 362 aa22.17■■□□□ 1.14
RAD9A-206ENST00000541132 SYN1P17600 705 aa22.16■■□□□ 1.14
RAD9A-206ENST00000541132 SH3RF3Q8TEJ3 882 aaPredicted RBP22.16■■□□□ 1.14
RAD9A-206ENST00000541132 TRIB2Q92519 343 aa22.16■■□□□ 1.14
RAD9A-206ENST00000541132 TMOD4Q9NZQ9 345 aa22.16■■□□□ 1.14
RAD9A-206ENST00000541132 PI4KBQ9UBF8 816 aa22.16■■□□□ 1.14
RAD9A-206ENST00000541132 OGDHLQ9ULD0 1010 aa22.16■■□□□ 1.14
RAD9A-206ENST00000541132 ARID4AP29374 1257 aaPredicted RBP22.15■■□□□ 1.14
RAD9A-206ENST00000541132 MNX1P50219 401 aaPredicted RBP22.15■■□□□ 1.14
RAD9A-206ENST00000541132 BACE1P56817 501 aa22.15■■□□□ 1.14
RAD9A-206ENST00000541132 MTX1Q13505 466 aa22.15■■□□□ 1.14
RAD9A-206ENST00000541132 MTMR2Q13614 643 aa22.15■■□□□ 1.14
RAD9A-206ENST00000541132 P2RX7Q99572 595 aaKnown RBP22.15■■□□□ 1.14
RAD9A-206ENST00000541132 NUDT12Q9BQG2 462 aa22.15■■□□□ 1.14
RAD9A-206ENST00000541132 WDR18Q9BV38 432 aa22.15■■□□□ 1.14
RAD9A-206ENST00000541132 SIPA1L1O43166 1804 aa22.15■■□□□ 1.14
RAD9A-206ENST00000541132 MCAMP43121 646 aa22.14■■□□□ 1.13
RAD9A-206ENST00000541132 DHX36Q9H2U1 1008 aaKnown RBP22.14■■□□□ 1.13
RAD9A-206ENST00000541132 PEX10O60683 326 aa22.13■■□□□ 1.13
RAD9A-206ENST00000541132 BAG3O95817 575 aa22.13■■□□□ 1.13
RAD9A-206ENST00000541132 ASNSP08243 561 aa22.13■■□□□ 1.13
RAD9A-206ENST00000541132 UQCRFS1P1P0C7P4 283 aa22.13■■□□□ 1.13
RAD9A-206ENST00000541132 PRKAR2AP13861 404 aaKnown RBP22.13■■□□□ 1.13
RAD9A-206ENST00000541132 HOXA7P31268 230 aaPredicted RBP22.13■■□□□ 1.13
RAD9A-206ENST00000541132 MAGEA10P43363 369 aaPredicted RBP22.13■■□□□ 1.13
RAD9A-206ENST00000541132 G3BP1Q13283 466 aaKnown RBP eCLIP22.13■■□□□ 1.13
RAD9A-206ENST00000541132 GPR153Q6NV75 609 aa22.13■■□□□ 1.13
RAD9A-206ENST00000541132 GPRC5AQ8NFJ5 357 aa22.13■■□□□ 1.13
RAD9A-206ENST00000541132 AATFQ9NY61 560 aaKnown RBP eCLIP22.13■■□□□ 1.13
RAD9A-206ENST00000541132 LAMA3Q16787 3333 aa22.13■■□□□ 1.13
RAD9A-206ENST00000541132 CDK5RAP2Q96SN8 1893 aa22.13■■□□□ 1.13
RAD9A-206ENST00000541132 COL6A3P12111 3177 aa22.13■■□□□ 1.13
RAD9A-206ENST00000541132 HERVK_113P62684 666 aa22.12■■□□□ 1.13
RAD9A-206ENST00000541132 MAP3K21Q5TCX8 1036 aa22.12■■□□□ 1.13
RAD9A-206ENST00000541132 DEFB123Q8N688 67 aa22.12■■□□□ 1.13
RAD9A-206ENST00000541132 SOCS4Q8WXH5 440 aa22.12■■□□□ 1.13
RAD9A-206ENST00000541132 TRIM34Q9BYJ4 488 aa22.12■■□□□ 1.13
RAD9A-206ENST00000541132 C19orf81C9J6K1 198 aa22.11■■□□□ 1.13
RAD9A-206ENST00000541132 XRCC5P13010 732 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms