RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 CRACR2BQ8N4Y2 399 aaPredicted RBP11.08□□□□□ -0.64
LCOR-209ENST00000540664 CNBD1Q8NA66 436 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 FANCBQ8NB91 859 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.08□□□□□ -0.64
LCOR-209ENST00000540664 SLC26A6Q9BXS9 759 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 ATP8A2Q9NTI2 1148 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 MYH2Q9UKX2 1941 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.08□□□□□ -0.64
LCOR-209ENST00000540664 FAM237AA0A1B0GTK4 181 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 UBE2Q2LH0YL09 131 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 ORC4O43929 436 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 CMA1P23946 247 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 PRDX5P30044 214 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 SBK1Q52WX2 424 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 PRR5LQ6MZQ0 368 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 LUZP1Q86V48 1076 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 ZSCAN10Q96SZ4 725 aaPredicted RBP11.08□□□□□ -0.64
LCOR-209ENST00000540664 UBAC1Q9BSL1 405 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
LCOR-209ENST00000540664 TOMM22Q9NS69 142 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.08□□□□□ -0.64
LCOR-209ENST00000540664 XDHP47989 1333 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 OFD1O75665 1012 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 DEXIO95424 95 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 MMP1P03956 469 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 GYS1P13807 737 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 GUCY1A2P33402 732 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 ZNF165P49910 485 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 NDUFA8P51970 172 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 TRIM29Q14134 588 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 IQCB1Q15051 598 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 SPTY2D1Q68D10 685 aaPredicted RBP11.07□□□□□ -0.64
LCOR-209ENST00000540664 ENAHQ8N8S7 591 aaPredicted RBP11.07□□□□□ -0.64
LCOR-209ENST00000540664 CRNKL1Q9BZJ0 848 aaKnown RBP11.07□□□□□ -0.64
LCOR-209ENST00000540664 DNAJC25Q9H1X3 360 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.07□□□□□ -0.64
LCOR-209ENST00000540664 CYP2D7A0A087X1C5 515 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 A0A1B0GVL5 298 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 USP17L12C9JPN9 530 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 USP17L21D6R901 530 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 WDHD1O75717 1129 aaPredicted RBP11.07□□□□□ -0.64
LCOR-209ENST00000540664 PTMAP06454 111 aaKnown RBP11.07□□□□□ -0.64
LCOR-209ENST00000540664 FUT2Q10981 343 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 SF3A1Q15459 793 aaKnown RBP11.07□□□□□ -0.64
LCOR-209ENST00000540664 STX1AQ16623 288 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 TRIM22Q8IYM9 498 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 HPSEQ9Y251 543 aa11.07□□□□□ -0.64
LCOR-209ENST00000540664 NPHP1O15259 732 aa11.06□□□□□ -0.64
LCOR-209ENST00000540664 NT5C2P49902 561 aa11.06□□□□□ -0.64
LCOR-209ENST00000540664 NOSTRINQ8IVI9 506 aa11.06□□□□□ -0.64
LCOR-209ENST00000540664 WDR66Q8TBY9 1149 aa11.06□□□□□ -0.64
LCOR-209ENST00000540664 RNF26Q9BY78 433 aaPredicted RBP11.06□□□□□ -0.64
LCOR-209ENST00000540664 FOXP1Q9H334 677 aaPredicted RBP11.06□□□□□ -0.64
LCOR-209ENST00000540664 AATFQ9NY61 560 aaKnown RBP eCLIP11.06□□□□□ -0.64
LCOR-209ENST00000540664 ARPP21Q9UBL0 812 aaPredicted RBP11.06□□□□□ -0.64
LCOR-209ENST00000540664 MKRN1Q9UHC7 482 aaKnown RBP11.06□□□□□ -0.64
LCOR-209ENST00000540664 LRRC37AA6NMS7 1700 aa11.06□□□□□ -0.64
LCOR-209ENST00000540664 MROH7-TTC4A0A0A0MT08 1334 aa11.06□□□□□ -0.64
LCOR-209ENST00000540664 LTBP1Q14766 1721 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 RBM6P78332 1123 aaKnown RBP11.05□□□□□ -0.64
LCOR-209ENST00000540664 TROAPQ12815 778 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 CHAF1AQ13111 956 aaPredicted RBP11.05□□□□□ -0.64
LCOR-209ENST00000540664 ZNF772Q68DY9 489 aaPredicted RBP11.05□□□□□ -0.64
LCOR-209ENST00000540664 SLC51AQ86UW1 340 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 PLA2G4DQ86XP0 818 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 STK11IPQ8N1F8 1099 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 TIGD1Q96MW7 591 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 MYH6P13533 1939 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 SARM1Q6SZW1 724 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 C11orf57Q6ZUT1 292 aaPredicted RBP11.05□□□□□ -0.64
LCOR-209ENST00000540664 IQCA1Q86XH1 822 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 JMYQ8N9B5 988 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 ANO10Q9NW15 660 aa11.05□□□□□ -0.64
LCOR-209ENST00000540664 KLRG2A4D1S0 409 aaPredicted RBP11.04□□□□□ -0.64
LCOR-209ENST00000540664 DDAH1O94760 285 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 TPM3P06753 285 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 CALM1P0DP23 149 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 CALM2P0DP24 149 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 CALM3P0DP25 149 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 PFKFB1P16118 471 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 HOXA10P31260 410 aaPredicted RBP11.04□□□□□ -0.64
LCOR-209ENST00000540664 TOB1P50616 345 aaPredicted RBP11.04□□□□□ -0.64
LCOR-209ENST00000540664 PPP4CP60510 307 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 PKN1Q16512 942 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 IFIT1BQ5T764 474 aaKnown RBP11.04□□□□□ -0.64
LCOR-209ENST00000540664 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.04□□□□□ -0.64
LCOR-209ENST00000540664 DIS3L2Q8IYB7 885 aaKnown RBP11.04□□□□□ -0.64
LCOR-209ENST00000540664 RBM28Q9NW13 759 aaKnown RBP11.04□□□□□ -0.64
LCOR-209ENST00000540664 ANKIB1Q9P2G1 1089 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 MORC2Q9Y6X9 1032 aaPredicted RBP11.04□□□□□ -0.64
LCOR-209ENST00000540664 ROBO3Q96MS0 1386 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 BTBD18B2RXH4 712 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 PRPF3O43395 683 aaKnown RBP11.04□□□□□ -0.64
LCOR-209ENST00000540664 ZNF202O95125 648 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 SERPINB2P05120 415 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 EVX2Q03828 476 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 GNL2Q13823 731 aaKnown RBP11.04□□□□□ -0.64
LCOR-209ENST00000540664 SAFBQ15424 915 aaKnown RBP eCLIP11.04□□□□□ -0.64
LCOR-209ENST00000540664 TXNRD1Q16881 649 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 RESP18Q5W5W9 173 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms