RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FOXN1O15353 648 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 MMP1P03956 469 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 TPM1P09493 284 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 CYP19A1P11511 503 aaPredicted RBP14.1□□□□□ -0.15
NPC1-202ENST00000540608 PHKA1P46020 1223 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 SARSP49591 514 aaKnown RBP14.1□□□□□ -0.15
NPC1-202ENST00000540608 TOB1P50616 345 aaPredicted RBP14.1□□□□□ -0.15
NPC1-202ENST00000540608 SAFBQ15424 915 aaKnown RBP eCLIP14.1□□□□□ -0.15
NPC1-202ENST00000540608 IFNL3Q8IZI9 196 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 MLKLQ8NB16 471 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 MNS1Q8NEH6 495 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 MPHOSPH8Q99549 860 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 BAG1Q99933 345 aaPredicted RBP14.1□□□□□ -0.15
NPC1-202ENST00000540608 ARGLU1Q9NWB6 273 aaPredicted RBP14.1□□□□□ -0.15
NPC1-202ENST00000540608 BTG4Q9NY30 223 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 PARP3Q9Y6F1 533 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 NHSL1Q5SYE7 1610 aa14.1□□□□□ -0.15
NPC1-202ENST00000540608 BTBD18B2RXH4 712 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 TADA3O75528 432 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 ZRANB2O95218 330 aaKnown RBP eCLIP14.09□□□□□ -0.15
NPC1-202ENST00000540608 PTPREP23469 700 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 POSTNQ15063 836 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
NPC1-202ENST00000540608 ENOX1Q8TC92 643 aaKnown RBP14.09□□□□□ -0.15
NPC1-202ENST00000540608 CNNM2Q9H8M5 875 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 DACH1Q9UI36 760 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 ZBTB1Q9Y2K1 713 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 NID2Q14112 1375 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 STX10O60499 249 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 ZNF18P17022 549 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 CREBRFQ8IUR6 639 aa14.09□□□□□ -0.15
NPC1-202ENST00000540608 ZNF579Q8NAF0 562 aaKnown RBP14.09□□□□□ -0.15
NPC1-202ENST00000540608 FOXP1Q9H334 677 aaPredicted RBP14.09□□□□□ -0.15
NPC1-202ENST00000540608 FBXO2Q9UK22 296 aaPredicted RBP14.09□□□□□ -0.15
NPC1-202ENST00000540608 LRP6O75581 1613 aa14.08□□□□□ -0.15
NPC1-202ENST00000540608 MYO5AQ9Y4I1 1855 aaKnown RBP14.08□□□□□ -0.15
NPC1-202ENST00000540608 PNMA6AP0CW24 399 aaPredicted RBP14.08□□□□□ -0.16
NPC1-202ENST00000540608 PTPN21Q16825 1174 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 RILPL1Q5EBL4 403 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 SPECC1Q5M775 1068 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 KRT23Q9C075 422 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 NAPBQ9H115 298 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 TRMT112Q9UI30 125 aaKnown RBP14.08□□□□□ -0.16
NPC1-202ENST00000540608 CDK11BP21127 795 aaKnown RBP14.08□□□□□ -0.16
NPC1-202ENST00000540608 CTDSPL2Q05D32 466 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 MORC3Q14149 939 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 SPECC1LQ69YQ0 1117 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 TMCO3Q6UWJ1 677 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 DIS3L2Q8IYB7 885 aaKnown RBP14.08□□□□□ -0.16
NPC1-202ENST00000540608 TRIML1Q8N9V2 468 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 NOL10Q9BSC4 688 aaKnown RBP14.08□□□□□ -0.16
NPC1-202ENST00000540608 CARD6Q9BX69 1037 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 EPB41L4AQ9HCS5 686 aaPredicted RBP14.08□□□□□ -0.16
NPC1-202ENST00000540608 ST7Q9NRC1 585 aa14.08□□□□□ -0.16
NPC1-202ENST00000540608 POLR2DO15514 142 aaKnown RBP14.07□□□□□ -0.16
NPC1-202ENST00000540608 CASQ1P31415 396 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 GUCY1A2P33402 732 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 MAP3K9P80192 1104 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 FMR1Q06787 632 aaKnown RBP eCLIP14.07□□□□□ -0.16
NPC1-202ENST00000540608 AKNAD1Q5T1N1 836 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 TRIM22Q8IYM9 498 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 TC2NQ8N9U0 490 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 LPIN2Q92539 896 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 SMARCE1Q969G3 411 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 NFE2L3Q9Y4A8 694 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 BCL9O00512 1426 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 KANK3Q6NY19 840 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 PDILTQ8N807 584 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 SERTAD1Q9UHV2 236 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 MYH3P11055 1940 aa14.07□□□□□ -0.16
NPC1-202ENST00000540608 ATP8B1O43520 1251 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 FGFR2P21802 821 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 PLA2G4AP47712 749 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 GRIN1Q05586 938 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 PUM3Q15397 648 aaKnown RBP14.06□□□□□ -0.16
NPC1-202ENST00000540608 MFSD6Q6ZSS7 791 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 KCNJ14Q9UNX9 436 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 PDE8AO60658 829 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 MBD4O95243 580 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 PRR29P0C7W0 189 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 MAP3K12Q12852 859 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 RTN1Q16799 776 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 ANKRD36CQ5JPF3 1778 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 NUTM2AQ8IVF1 878 aaPredicted RBP14.06□□□□□ -0.16
NPC1-202ENST00000540608 MAGEB6Q8N7X4 407 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 SPATA5Q8NB90 893 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 HELBQ8NG08 1087 aaPredicted RBP14.06□□□□□ -0.16
NPC1-202ENST00000540608 SRPRBQ9Y5M8 271 aaKnown RBP14.06□□□□□ -0.16
NPC1-202ENST00000540608 KAT6BQ8WYB5 2073 aa14.06□□□□□ -0.16
NPC1-202ENST00000540608 GSG1L2A8MUP6 293 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 DEXIO95424 95 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 GNG11P61952 73 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 NR1I3Q14994 352 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 HSP90AA4PQ58FG1 418 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 MROH5Q6ZUA9 1318 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 ADKP55263 362 aaKnown RBP14.05□□□□□ -0.16
NPC1-202ENST00000540608 TOGARAM2Q6ZUX3 1019 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 FAM177A1Q8N128 213 aaPredicted RBP14.05□□□□□ -0.16
NPC1-202ENST00000540608 TMTC2Q8N394 836 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms