RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 NBPF14Q5TI25 921 aa11.74□□□□□ -0.53
GPD2-213ENST00000540309 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
GPD2-213ENST00000540309 TMEM87BQ96K49 555 aa11.74□□□□□ -0.53
GPD2-213ENST00000540309 ADD3Q9UEY8 706 aaKnown RBP11.74□□□□□ -0.53
GPD2-213ENST00000540309 CEP131Q9UPN4 1083 aa11.74□□□□□ -0.53
GPD2-213ENST00000540309 C5P01031 1676 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 ECM29Q5VYK3 1845 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 PSMD14O00487 310 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 FOSBP53539 338 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 USP14P54578 494 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 CASP7P55210 303 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 CKAP4Q07065 602 aaKnown RBP11.73□□□□□ -0.53
GPD2-213ENST00000540309 PDE4BQ07343 736 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 SPAG1Q07617 926 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 ZNF569Q5MCW4 686 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 CDKAL1Q5VV42 579 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 KRT40Q6A162 431 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 RALYLQ86SE5 291 aaKnown RBP11.73□□□□□ -0.53
GPD2-213ENST00000540309 EHBP1Q8NDI1 1231 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 COG1Q8WTW3 980 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 CCDC102AQ96A19 550 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 ALG1Q9BT22 464 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 MTA3Q9BTC8 594 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 MYO6Q9UM54 1294 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 ANGEL1Q9UNK9 670 aaKnown RBP11.73□□□□□ -0.53
GPD2-213ENST00000540309 EID1Q9Y6B2 187 aa11.73□□□□□ -0.53
GPD2-213ENST00000540309 CCDC196A0A1B0GTZ2 297 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 GOLIM4O00461 696 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 RNF40O75150 1001 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 SYF2O95926 243 aaKnown RBP11.72□□□□□ -0.53
GPD2-213ENST00000540309 MARCKSP29966 332 aaPredicted RBP11.72□□□□□ -0.53
GPD2-213ENST00000540309 RCAN1P53805 252 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 ITIH3Q06033 890 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 SEMA3FQ13275 785 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 CYP26C1Q6V0L0 522 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 RAD9BQ6WBX8 426 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 UBE3BQ7Z3V4 1068 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 SGMS1Q86VZ5 419 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 IGSF22Q8N9C0 903 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 KIF1AQ12756 1690 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.72□□□□□ -0.53
GPD2-213ENST00000540309 KIF1CO43896 1103 aaKnown RBP11.72□□□□□ -0.53
GPD2-213ENST00000540309 TRDNQ13061 729 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 KARSQ15046 597 aaKnown RBP11.72□□□□□ -0.53
GPD2-213ENST00000540309 IQCEQ6IPM2 695 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 MPRIPQ6WCQ1 1025 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 TRAPPC11Q7Z392 1133 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 LRP10Q7Z4F1 713 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 KLHDC4Q8TBB5 520 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 GSDMAQ96QA5 445 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 FOXP1Q9H334 677 aaPredicted RBP11.72□□□□□ -0.53
GPD2-213ENST00000540309 HAUS4Q9H6D7 363 aa11.72□□□□□ -0.53
GPD2-213ENST00000540309 MYO5AQ9Y4I1 1855 aaKnown RBP11.72□□□□□ -0.53
GPD2-213ENST00000540309 ATRNO75882 1429 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 LAMB4A4D0S4 1761 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 BCL9LQ86UU0 1499 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 SOWAHDA6NJG2 315 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 EBAG9O00559 213 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 IFIT1P09914 478 aaKnown RBP11.71□□□□□ -0.53
GPD2-213ENST00000540309 CDC27P30260 824 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 ANTXR2P58335 489 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 FMR1Q06787 632 aaKnown RBP eCLIP11.71□□□□□ -0.53
GPD2-213ENST00000540309 WASHC4Q2M389 1173 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 OTUD7BQ6GQQ9 843 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 APPBP2Q92624 585 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 PYM1Q9BRP8 204 aaKnown RBP11.71□□□□□ -0.53
GPD2-213ENST00000540309 DESI2Q9BSY9 194 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 LZTFL1Q9NQ48 299 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.53
GPD2-213ENST00000540309 SRPRBQ9Y5M8 271 aaKnown RBP11.71□□□□□ -0.53
GPD2-213ENST00000540309 CDHR2Q9BYE9 1310 aa11.71□□□□□ -0.53
GPD2-213ENST00000540309 MST1RQ04912 1400 aa11.71□□□□□ -0.54
GPD2-213ENST00000540309 SRRM3A6NNA2 597 aaPredicted RBP11.7□□□□□ -0.54
GPD2-213ENST00000540309 LRRIQ3A6PVS8 624 aaPredicted RBP11.7□□□□□ -0.54
GPD2-213ENST00000540309 ZNF213O14771 459 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 ZEB2O60315 1214 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 N4BP1O75113 896 aaKnown RBP11.7□□□□□ -0.54
GPD2-213ENST00000540309 BMP15O95972 392 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 FGAP02671 866 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 LTKP29376 864 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 LIFRP42702 1097 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 METAP2P50579 478 aaKnown RBP eCLIP11.7□□□□□ -0.54
GPD2-213ENST00000540309 RBL2Q08999 1139 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 PPFIA1Q13136 1202 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 SAFBQ15424 915 aaKnown RBP eCLIP11.7□□□□□ -0.54
GPD2-213ENST00000540309 PAPD7Q5XG87 772 aaKnown RBP11.7□□□□□ -0.54
GPD2-213ENST00000540309 ZNF790Q6PG37 636 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 NOSTRINQ8IVI9 506 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 SLC35F6Q8N357 371 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 STAG1Q8WVM7 1258 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 SMARCC1Q92922 1105 aaPredicted RBP11.7□□□□□ -0.54
GPD2-213ENST00000540309 LTV1Q96GA3 475 aaPredicted RBP11.7□□□□□ -0.54
GPD2-213ENST00000540309 MYD88Q99836 296 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 TEX13AQ9BXU3 409 aaPredicted RBP11.7□□□□□ -0.54
GPD2-213ENST00000540309 HPCAL4Q9UM19 191 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 ZC3H4Q9UPT8 1303 aaKnown RBP11.7□□□□□ -0.54
GPD2-213ENST00000540309 PXDNQ92626 1479 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 ANO9A1A5B4 782 aa11.7□□□□□ -0.54
GPD2-213ENST00000540309 H7C1W4 665 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms