RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 GCLCP48506 637 aaPredicted RBP24.68■■□□□ 1.54
LPCAT3-210ENST00000540090 ZNF280CQ8ND82 737 aa24.68■■□□□ 1.54
LPCAT3-210ENST00000540090 NSUN4Q96CB9 384 aaKnown RBP24.68■■□□□ 1.54
LPCAT3-210ENST00000540090 TBC1D2Q9BYX2 928 aa24.68■■□□□ 1.54
LPCAT3-210ENST00000540090 HMG20BQ9P0W2 317 aa24.68■■□□□ 1.54
LPCAT3-210ENST00000540090 TAOK2Q9UL54 1235 aa24.68■■□□□ 1.54
LPCAT3-210ENST00000540090 LAMA3Q16787 3333 aa24.68■■□□□ 1.54
LPCAT3-210ENST00000540090 SRGAP3O43295 1099 aa24.67■■□□□ 1.54
LPCAT3-210ENST00000540090 GSTO1P78417 241 aa24.67■■□□□ 1.54
LPCAT3-210ENST00000540090 MTX1Q13505 466 aa24.67■■□□□ 1.54
LPCAT3-210ENST00000540090 PAWRQ96IZ0 340 aaKnown RBP24.67■■□□□ 1.54
LPCAT3-210ENST00000540090 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.67■■□□□ 1.54
LPCAT3-210ENST00000540090 PHIPQ8WWQ0 1821 aa24.66■■□□□ 1.54
LPCAT3-210ENST00000540090 CAP2P40123 477 aa24.66■■□□□ 1.54
LPCAT3-210ENST00000540090 SPATA5Q8NB90 893 aa24.66■■□□□ 1.54
LPCAT3-210ENST00000540090 NEUROD6Q96NK8 337 aa24.66■■□□□ 1.54
LPCAT3-210ENST00000540090 GJD2Q9UKL4 321 aa24.66■■□□□ 1.54
LPCAT3-210ENST00000540090 PTPRFP10586 1907 aa24.66■■□□□ 1.54
LPCAT3-210ENST00000540090 GNAI3P08754 354 aa24.65■■□□□ 1.54
LPCAT3-210ENST00000540090 PABPC4Q13310 644 aaKnown RBP eCLIP24.65■■□□□ 1.54
LPCAT3-210ENST00000540090 DOCK1Q14185 1865 aa24.65■■□□□ 1.54
LPCAT3-210ENST00000540090 RRP1BQ14684 758 aaKnown RBP24.65■■□□□ 1.54
LPCAT3-210ENST00000540090 TBC1D9Q6ZT07 1266 aa24.65■■□□□ 1.54
LPCAT3-210ENST00000540090 NECAB2Q7Z6G3 386 aa24.65■■□□□ 1.54
LPCAT3-210ENST00000540090 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.65■■□□□ 1.54
LPCAT3-210ENST00000540090 STAP2Q9UGK3 403 aa24.65■■□□□ 1.54
LPCAT3-210ENST00000540090 DOCK3Q8IZD9 2030 aa24.64■■□□□ 1.54
LPCAT3-210ENST00000540090 HMGCS2P54868 508 aa24.64■■□□□ 1.54
LPCAT3-210ENST00000540090 SH3D19Q5HYK7 790 aa24.64■■□□□ 1.54
LPCAT3-210ENST00000540090 PI16Q6UXB8 463 aa24.64■■□□□ 1.54
LPCAT3-210ENST00000540090 ARHGAP45Q92619 1136 aa24.64■■□□□ 1.54
LPCAT3-210ENST00000540090 ASCC2Q9H1I8 757 aaPredicted RBP24.64■■□□□ 1.54
LPCAT3-210ENST00000540090 COL2A1P02458 1487 aaPredicted RBP24.64■■□□□ 1.53
LPCAT3-210ENST00000540090 USP17L5A8MUK1 530 aa24.63■■□□□ 1.53
LPCAT3-210ENST00000540090 HMGCRP04035 888 aa24.63■■□□□ 1.53
LPCAT3-210ENST00000540090 ANKLE1Q8NAG6 615 aa24.63■■□□□ 1.53
LPCAT3-210ENST00000540090 HERC5Q9UII4 1024 aaKnown RBP24.63■■□□□ 1.53
LPCAT3-210ENST00000540090 ARID4AP29374 1257 aaPredicted RBP24.62■■□□□ 1.53
LPCAT3-210ENST00000540090 GORABQ5T7V8 394 aa24.62■■□□□ 1.53
LPCAT3-210ENST00000540090 DIS3LQ8TF46 1054 aaKnown RBP24.62■■□□□ 1.53
LPCAT3-210ENST00000540090 RAI14Q9P0K7 980 aa24.62■■□□□ 1.53
LPCAT3-210ENST00000540090 RPTORQ8N122 1335 aa24.61■■□□□ 1.53
LPCAT3-210ENST00000540090 SOX1O00570 391 aaPredicted RBP24.61■■□□□ 1.53
LPCAT3-210ENST00000540090 RARSP54136 660 aaKnown RBP24.61■■□□□ 1.53
LPCAT3-210ENST00000540090 AS3MTQ9HBK9 375 aa24.61■■□□□ 1.53
LPCAT3-210ENST00000540090 HMX1Q9NP08 348 aaPredicted RBP24.61■■□□□ 1.53
LPCAT3-210ENST00000540090 MORF4L1Q9UBU8 362 aa24.61■■□□□ 1.53
LPCAT3-210ENST00000540090 TEX11Q8IYF3 940 aa24.6■■□□□ 1.53
LPCAT3-210ENST00000540090 GDF15Q99988 308 aa24.6■■□□□ 1.53
LPCAT3-210ENST00000540090 WDR18Q9BV38 432 aa24.6■■□□□ 1.53
LPCAT3-210ENST00000540090 PI4KBQ9UBF8 816 aa24.6■■□□□ 1.53
LPCAT3-210ENST00000540090 BMP8BP34820 402 aa24.59■■□□□ 1.53
LPCAT3-210ENST00000540090 MCAMP43121 646 aa24.59■■□□□ 1.53
LPCAT3-210ENST00000540090 TRIM32Q13049 653 aa24.59■■□□□ 1.53
LPCAT3-210ENST00000540090 DHX36Q9H2U1 1008 aaKnown RBP24.59■■□□□ 1.53
LPCAT3-210ENST00000540090 LRP2BPQ9P2M1 347 aa24.59■■□□□ 1.53
LPCAT3-210ENST00000540090 HOXA7P31268 230 aaPredicted RBP24.58■■□□□ 1.53
LPCAT3-210ENST00000540090 MNX1P50219 401 aaPredicted RBP24.58■■□□□ 1.53
LPCAT3-210ENST00000540090 BACE1P56817 501 aa24.58■■□□□ 1.53
LPCAT3-210ENST00000540090 SH3RF3Q8TEJ3 882 aaPredicted RBP24.58■■□□□ 1.53
LPCAT3-210ENST00000540090 LRCH3Q96II8 777 aa24.58■■□□□ 1.53
LPCAT3-210ENST00000540090 NBPF3Q9H094 633 aa24.58■■□□□ 1.53
LPCAT3-210ENST00000540090 COL6A3P12111 3177 aa24.58■■□□□ 1.52
LPCAT3-210ENST00000540090 UQCRFS1P1P0C7P4 283 aa24.57■■□□□ 1.52
LPCAT3-210ENST00000540090 G3BP1Q13283 466 aaKnown RBP eCLIP24.57■■□□□ 1.52
LPCAT3-210ENST00000540090 ASNSP08243 561 aa24.56■■□□□ 1.52
LPCAT3-210ENST00000540090 METTL16Q86W50 562 aaKnown RBP24.56■■□□□ 1.52
LPCAT3-210ENST00000540090 SLC17A8Q8NDX2 589 aa24.56■■□□□ 1.52
LPCAT3-210ENST00000540090 P2RX7Q99572 595 aaKnown RBP24.56■■□□□ 1.52
LPCAT3-210ENST00000540090 OGDHLQ9ULD0 1010 aa24.56■■□□□ 1.52
LPCAT3-210ENST00000540090 BAG3O95817 575 aa24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 GNAI2P04899 355 aa24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 PPP4CP60510 307 aa24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 IRX3P78415 501 aaPredicted RBP24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 MTMR2Q13614 643 aa24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 MAP3K21Q5TCX8 1036 aa24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 FOXP4Q8IVH2 680 aaPredicted RBP24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 C7orf61Q8IZ16 206 aa24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 TRIB2Q92519 343 aa24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 NOL10Q9BSC4 688 aaKnown RBP24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 TMOD4Q9NZQ9 345 aa24.55■■□□□ 1.52
LPCAT3-210ENST00000540090 LOC285556D6RIA3 1793 aa24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 PNMA6EA0A0J9YXQ4 647 aa24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 C19orf81C9J6K1 198 aa24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 XRCC5P13010 732 aaKnown RBP24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 CYP2B6P20813 491 aa24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 JAG1P78504 1218 aa24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 NAA16Q6N069 864 aaPredicted RBP24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 GPRC5AQ8NFJ5 357 aa24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 C11orf49Q9H6J7 331 aa24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 AATFQ9NY61 560 aaKnown RBP eCLIP24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 ZMYND8Q9ULU4 1186 aaPredicted RBP24.54■■□□□ 1.52
LPCAT3-210ENST00000540090 PLCG2P16885 1265 aa24.53■■□□□ 1.52
LPCAT3-210ENST00000540090 TGFBRAP1Q8WUH2 860 aa24.53■■□□□ 1.52
LPCAT3-210ENST00000540090 NUDT12Q9BQG2 462 aa24.53■■□□□ 1.52
LPCAT3-210ENST00000540090 DNAJC18Q9H819 358 aa24.53■■□□□ 1.52
LPCAT3-210ENST00000540090 TXNRD2Q9NNW7 524 aa24.53■■□□□ 1.52
LPCAT3-210ENST00000540090 GINM1Q9NU53 330 aa24.53■■□□□ 1.52
LPCAT3-210ENST00000540090 A0A0C4DFX4 3053 aa24.53■■□□□ 1.52
LPCAT3-210ENST00000540090 HERVK_113P62684 666 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms