RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 BRPF3Q9ULD4 1205 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDH19-203ENST00000540086 SCN9AQ15858 1988 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 TIAM2Q8IVF5 1701 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 MYO3BQ8WXR4 1341 aa8.13□□□□□ -1.11
CDH19-203ENST00000540086 PFKFB2O60825 505 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 SLC3A2P08195 630 aaKnown RBP8.12□□□□□ -1.11
CDH19-203ENST00000540086 FGRP09769 529 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 PDIA3P30101 505 aaKnown RBP8.12□□□□□ -1.11
CDH19-203ENST00000540086 CCT2P78371 535 aaKnown RBP8.12□□□□□ -1.11
CDH19-203ENST00000540086 PDE4BQ07343 736 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 SCRN1Q12765 414 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 PKP1Q13835 747 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 CIAPIN1Q6FI81 312 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 ARHGAP27Q6ZUM4 889 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 FBXL16Q8N461 479 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 IGDCC4Q8TDY8 1250 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 GTF3C6Q969F1 213 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 SYT17Q9BSW7 474 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 LY9Q9HBG7 655 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 NCOA5Q9HCD5 579 aaKnown RBP8.12□□□□□ -1.11
CDH19-203ENST00000540086 CIZ1Q9ULV3 898 aaPredicted RBP8.12□□□□□ -1.11
CDH19-203ENST00000540086 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
CDH19-203ENST00000540086 SMC3Q9UQE7 1217 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.12□□□□□ -1.11
CDH19-203ENST00000540086 SRCAPQ6ZRS2 3230 aa8.12□□□□□ -1.11
CDH19-203ENST00000540086 GOLGA8BA8MQT2 603 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 ORC4O43929 436 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 FAM47AQ5JRC9 791 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 NFXL1Q6ZNB6 911 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 ZNF274Q96GC6 653 aaPredicted RBP8.11□□□□□ -1.11
CDH19-203ENST00000540086 TMEM87BQ96K49 555 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 PRMT6Q96LA8 375 aaPredicted RBP8.11□□□□□ -1.11
CDH19-203ENST00000540086 UBAC1Q9BSL1 405 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 TDRD3Q9H7E2 651 aaKnown RBP8.11□□□□□ -1.11
CDH19-203ENST00000540086 ROBO3Q96MS0 1386 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 SHTN1A0MZ66 631 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 JAK2O60674 1132 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 PCP11498 1178 aaKnown RBP8.11□□□□□ -1.11
CDH19-203ENST00000540086 RXRAP19793 462 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 GJB2P29033 226 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 EVCP57679 992 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 TCP10Q12799 353 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 SART3Q15020 963 aaKnown RBP8.11□□□□□ -1.11
CDH19-203ENST00000540086 TNIP1Q15025 636 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 ZFPM1Q8IX07 1006 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 OGFOD1Q8N543 542 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 AGBL3Q8NEM8 1001 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 OSBPL5Q9H0X9 879 aaPredicted RBP8.11□□□□□ -1.11
CDH19-203ENST00000540086 MKNK2Q9HBH9 465 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 HDAC9Q9UKV0 1011 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 HPS5Q9UPZ3 1129 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 TNKSO95271 1327 aa8.11□□□□□ -1.11
CDH19-203ENST00000540086 CLRN2A0PK11 232 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 ERICH2A1L162 156 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 SPDYE2BA6NHP3 402 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 TSPY2A6NKD2 308 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 NMT2O60551 498 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 PPFIA3O75145 1194 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 SPDYE6P0CI01 402 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 CDK8P49336 464 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 EIF6P56537 245 aaKnown RBP8.1□□□□□ -1.11
CDH19-203ENST00000540086 WTAPQ15007 396 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 RAB3GAP1Q15042 981 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 DLGAP5Q15398 846 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 FOXD4L5Q5VV16 416 aaPredicted RBP8.1□□□□□ -1.11
CDH19-203ENST00000540086 C16orf86Q6ZW13 317 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 FOXD4L4Q8WXT5 416 aaPredicted RBP8.1□□□□□ -1.11
CDH19-203ENST00000540086 ZSCAN10Q96SZ4 725 aaPredicted RBP8.1□□□□□ -1.11
CDH19-203ENST00000540086 MYL10Q9BUA6 226 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 FAM198AQ9UFP1 575 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 GJA3Q9Y6H8 435 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 ZNF541Q9H0D2 1346 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 BRCA1P38398 1863 aaKnown RBP8.1□□□□□ -1.11
CDH19-203ENST00000540086 CCDC88AQ3V6T2 1871 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 ADAMTSL1Q8N6G6 1762 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 LAMA4Q16363 1823 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 CCDC69A6NI79 296 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 FZD9O00144 591 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 CTDNEP1O95476 244 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDH19-203ENST00000540086 LIFRP42702 1097 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 GMPSP49915 693 aaPredicted RBP8.1□□□□□ -1.11
CDH19-203ENST00000540086 TFAP4Q01664 338 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 SEC23AQ15436 765 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 APOA5Q6Q788 366 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 TTC6Q86TZ1 520 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 SGMS1Q86VZ5 419 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 MICU3Q86XE3 530 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 CCDC144CPQ8IYA2 1237 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 ENAHQ8N8S7 591 aaPredicted RBP8.1□□□□□ -1.11
CDH19-203ENST00000540086 TNPO1Q92973 898 aaKnown RBP8.1□□□□□ -1.11
CDH19-203ENST00000540086 DDX11Q96FC9 970 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 IDI2Q9BXS1 227 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 ZDHHC9Q9Y397 364 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 SLC12A7Q9Y666 1083 aa8.1□□□□□ -1.11
CDH19-203ENST00000540086 MYH2Q9UKX2 1941 aa8.09□□□□□ -1.11
CDH19-203ENST00000540086 UTRNP46939 3433 aa8.09□□□□□ -1.11
CDH19-203ENST00000540086 PTPDC1A2A3K4 754 aa8.09□□□□□ -1.11
CDH19-203ENST00000540086 ZBTB43O43298 467 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms