RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TCP10Q12799 353 aa19.07■□□□□ 0.64
TRAF3-204ENST00000539721 TOB2Q14106 344 aaPredicted RBP19.07■□□□□ 0.64
TRAF3-204ENST00000539721 SPDYE2Q495Y8 402 aa19.07■□□□□ 0.64
TRAF3-204ENST00000539721 RBM26Q5T8P6 1007 aaKnown RBP19.07■□□□□ 0.64
TRAF3-204ENST00000539721 CYB5R4Q7L1T6 521 aa19.07■□□□□ 0.64
TRAF3-204ENST00000539721 ESR2Q92731 530 aa19.07■□□□□ 0.64
TRAF3-204ENST00000539721 DYNLL2Q96FJ2 89 aa19.07■□□□□ 0.64
TRAF3-204ENST00000539721 LARP6Q9BRS8 491 aaKnown RBP19.07■□□□□ 0.64
TRAF3-204ENST00000539721 LIMCH1Q9UPQ0 1083 aa19.07■□□□□ 0.64
TRAF3-204ENST00000539721 ORC4O43929 436 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 PRDM1O75626 825 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 NKX2-3Q8TAU0 364 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 SRCAPQ6ZRS2 3230 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 H7C1D1 291 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 WNT10BO00744 389 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 ENTPD3O75355 529 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 HLA-DOAP06340 250 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 NBPF9Q3BBW0 867 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 BRF1Q92994 677 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 TMX3Q96JJ7 454 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 VEZTQ9HBM0 779 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 ZSWIM5Q9P217 1185 aa19.06■□□□□ 0.64
TRAF3-204ENST00000539721 MYH8P13535 1937 aa19.05■□□□□ 0.64
TRAF3-204ENST00000539721 TCP10L2B9ZVM9 353 aa19.05■□□□□ 0.64
TRAF3-204ENST00000539721 RANBP6O60518 1105 aaKnown RBP19.05■□□□□ 0.64
TRAF3-204ENST00000539721 TBC1D10BQ4KMP7 808 aaPredicted RBP19.05■□□□□ 0.64
TRAF3-204ENST00000539721 SAMD7Q7Z3H4 446 aa19.05■□□□□ 0.64
TRAF3-204ENST00000539721 ZFPM1Q8IX07 1006 aa19.05■□□□□ 0.64
TRAF3-204ENST00000539721 SPRYD3Q8NCJ5 442 aa19.05■□□□□ 0.64
TRAF3-204ENST00000539721 DHX36Q9H2U1 1008 aaKnown RBP19.05■□□□□ 0.64
TRAF3-204ENST00000539721 MKNK2Q9HBH9 465 aa19.05■□□□□ 0.64
TRAF3-204ENST00000539721 ZNF287Q9HBT7 754 aa19.05■□□□□ 0.64
TRAF3-204ENST00000539721 GPRC5DQ9NZD1 345 aa19.05■□□□□ 0.64
TRAF3-204ENST00000539721 DDNO94850 711 aaPredicted RBP19.04■□□□□ 0.64
TRAF3-204ENST00000539721 HSP90AA1P07900 732 aaKnown RBP19.04■□□□□ 0.64
TRAF3-204ENST00000539721 KIF4BQ2VIQ3 1234 aa19.04■□□□□ 0.64
TRAF3-204ENST00000539721 C16orf86Q6ZW13 317 aa19.04■□□□□ 0.64
TRAF3-204ENST00000539721 ZSCAN29Q8IWY8 852 aaPredicted RBP19.04■□□□□ 0.64
TRAF3-204ENST00000539721 ZSCAN31Q96LW9 406 aaPredicted RBP19.04■□□□□ 0.64
TRAF3-204ENST00000539721 AGXT2Q9BYV1 514 aa19.04■□□□□ 0.64
TRAF3-204ENST00000539721 COL2A1P02458 1487 aaPredicted RBP19.04■□□□□ 0.64
TRAF3-204ENST00000539721 EGFRP00533 1210 aa19.04■□□□□ 0.64
TRAF3-204ENST00000539721 TMEM87BQ96K49 555 aa19.04■□□□□ 0.64
TRAF3-204ENST00000539721 TPCN1Q9ULQ1 816 aa19.04■□□□□ 0.64
TRAF3-204ENST00000539721 SIPA1L1O43166 1804 aa19.03■□□□□ 0.64
TRAF3-204ENST00000539721 CDK8P49336 464 aa19.03■□□□□ 0.64
TRAF3-204ENST00000539721 FKBP1CQ5VVH2 108 aa19.03■□□□□ 0.64
TRAF3-204ENST00000539721 FBXL16Q8N461 479 aa19.03■□□□□ 0.64
TRAF3-204ENST00000539721 SLC44A5Q8NCS7 719 aa19.03■□□□□ 0.64
TRAF3-204ENST00000539721 GPHNQ9NQX3 736 aaPredicted RBP19.03■□□□□ 0.64
TRAF3-204ENST00000539721 UTRNP46939 3433 aa19.03■□□□□ 0.64
TRAF3-204ENST00000539721 DDTLA6NHG4 134 aaPredicted RBP19.02■□□□□ 0.64
TRAF3-204ENST00000539721 SH2B2O14492 632 aaPredicted RBP19.02■□□□□ 0.64
TRAF3-204ENST00000539721 IFIT3O14879 490 aaKnown RBP19.02■□□□□ 0.64
TRAF3-204ENST00000539721 LARGE1O95461 756 aa19.02■□□□□ 0.64
TRAF3-204ENST00000539721 NT5C2P49902 561 aa19.02■□□□□ 0.64
TRAF3-204ENST00000539721 APOBRQ0VD83 1088 aa19.02■□□□□ 0.64
TRAF3-204ENST00000539721 SART3Q15020 963 aaKnown RBP19.02■□□□□ 0.64
TRAF3-204ENST00000539721 ZKSCAN3Q9BRR0 538 aa19.02■□□□□ 0.64
TRAF3-204ENST00000539721 SH2B1Q9NRF2 756 aaPredicted RBP19.02■□□□□ 0.64
TRAF3-204ENST00000539721 SERPINB13Q9UIV8 391 aa19.02■□□□□ 0.64
TRAF3-204ENST00000539721 ANGEL1Q9UNK9 670 aaKnown RBP19.02■□□□□ 0.64
TRAF3-204ENST00000539721 ZC3H4Q9UPT8 1303 aaKnown RBP19.02■□□□□ 0.63
TRAF3-204ENST00000539721 ERICH2A1L162 156 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 TSPY2A6NKD2 308 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 LMOD1P29536 600 aaPredicted RBP19.01■□□□□ 0.63
TRAF3-204ENST00000539721 TMEM67Q5HYA8 995 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 FAM47AQ5JRC9 791 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 DPY19L2Q6NUT2 758 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 SH3BP5LQ7L8J4 393 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 ZNF444Q8N0Y2 327 aaPredicted RBP19.01■□□□□ 0.63
TRAF3-204ENST00000539721 FAM151AQ8WW52 585 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 UBAC1Q9BSL1 405 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 MTA3Q9BTC8 594 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 EHD4Q9H223 541 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 FOXD4L1Q9NU39 408 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 CNTNAP1P78357 1384 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 ATRNL1Q5VV63 1379 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 EPS15P42566 896 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 GABPAQ06546 454 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 ME3Q16798 604 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 IQCA1Q86XH1 822 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 IGDCC4Q8TDY8 1250 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 PI4KBQ9UBF8 816 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 SWAP70Q9UH65 585 aa19.01■□□□□ 0.63
TRAF3-204ENST00000539721 RASA1P20936 1047 aa19■□□□□ 0.63
TRAF3-204ENST00000539721 TNNI2P48788 182 aa19■□□□□ 0.63
TRAF3-204ENST00000539721 CUL4AQ13619 759 aa19■□□□□ 0.63
TRAF3-204ENST00000539721 FAM83AQ86UY5 434 aa19■□□□□ 0.63
TRAF3-204ENST00000539721 CRACR2BQ8N4Y2 399 aaPredicted RBP19■□□□□ 0.63
TRAF3-204ENST00000539721 TRIM34Q9BYJ4 488 aa19■□□□□ 0.63
TRAF3-204ENST00000539721 NAP1L2Q9ULW6 460 aaPredicted RBP19■□□□□ 0.63
TRAF3-204ENST00000539721 TNKSO95271 1327 aa18.99■□□□□ 0.63
TRAF3-204ENST00000539721 TFAP4Q01664 338 aa18.99■□□□□ 0.63
TRAF3-204ENST00000539721 WTAPQ15007 396 aa18.99■□□□□ 0.63
TRAF3-204ENST00000539721 TRPM4Q8TD43 1214 aa18.99■□□□□ 0.63
TRAF3-204ENST00000539721 ZSCAN10Q96SZ4 725 aaPredicted RBP18.99■□□□□ 0.63
TRAF3-204ENST00000539721 LY9Q9HBG7 655 aa18.99■□□□□ 0.63
TRAF3-204ENST00000539721 KLF18A0A0U1RQI7 1052 aa18.98■□□□□ 0.63
TRAF3-204ENST00000539721 TSPY3P0CV98 308 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms