RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 SGIP1Q9BQI5 828 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 LLPHQ9BRT6 129 aaKnown RBP13.04□□□□□ -0.32
CTCFL-212ENST00000539382 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-212ENST00000539382 ARPP21Q9UBL0 812 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-212ENST00000539382 CDK5RAP2Q96SN8 1893 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-212ENST00000539382 COL4A5P29400 1685 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 TRAK2O60296 914 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 NMT2O60551 498 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 LIFRP42702 1097 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 SEC23AQ15436 765 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 CC2D2BQ6DHV5 1058 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 TEX11Q8IYF3 940 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 LMBRD1Q9NUN5 540 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 SUGT1Q9Y2Z0 365 aa13.04□□□□□ -0.32
CTCFL-212ENST00000539382 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
CTCFL-212ENST00000539382 RANBP6O60518 1105 aaKnown RBP13.03□□□□□ -0.32
CTCFL-212ENST00000539382 FAM47AQ5JRC9 791 aa13.03□□□□□ -0.32
CTCFL-212ENST00000539382 STRIP1Q5VSL9 837 aa13.03□□□□□ -0.32
CTCFL-212ENST00000539382 FERMT3Q86UX7 667 aa13.03□□□□□ -0.32
CTCFL-212ENST00000539382 MICU3Q86XE3 530 aa13.03□□□□□ -0.32
CTCFL-212ENST00000539382 KIAA0825Q8IV33 1275 aa13.03□□□□□ -0.32
CTCFL-212ENST00000539382 SLC44A5Q8NCS7 719 aa13.03□□□□□ -0.32
CTCFL-212ENST00000539382 ESR2Q92731 530 aa13.03□□□□□ -0.32
CTCFL-212ENST00000539382 NOL10Q9BSC4 688 aaKnown RBP13.03□□□□□ -0.32
CTCFL-212ENST00000539382 GDPD2Q9HCC8 539 aa13.03□□□□□ -0.32
CTCFL-212ENST00000539382 FOSBP53539 338 aa13.02□□□□□ -0.32
CTCFL-212ENST00000539382 CCDC93Q567U6 631 aa13.02□□□□□ -0.32
CTCFL-212ENST00000539382 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.32
CTCFL-212ENST00000539382 FAM173BQ6P4H8 233 aa13.02□□□□□ -0.32
CTCFL-212ENST00000539382 ENAHQ8N8S7 591 aaPredicted RBP13.02□□□□□ -0.32
CTCFL-212ENST00000539382 ZNF277Q9NRM2 450 aaPredicted RBP13.02□□□□□ -0.32
CTCFL-212ENST00000539382 PPP1R1BQ9UD71 204 aaPredicted RBP13.02□□□□□ -0.32
CTCFL-212ENST00000539382 FLT1P17948 1338 aa13.02□□□□□ -0.32
CTCFL-212ENST00000539382 LAMB1P07942 1786 aa13.02□□□□□ -0.32
CTCFL-212ENST00000539382 ORC4O43929 436 aa13.02□□□□□ -0.33
CTCFL-212ENST00000539382 NFXL1Q6ZNB6 911 aa13.02□□□□□ -0.33
CTCFL-212ENST00000539382 DDX4Q9NQI0 724 aaKnown RBP13.02□□□□□ -0.33
CTCFL-212ENST00000539382 TNKSO95271 1327 aa13.02□□□□□ -0.33
CTCFL-212ENST00000539382 TCHHQ07283 1943 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 USP17L3A6NCW0 530 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 USP17L4A6NCW7 530 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 PRPF40AO75400 957 aaKnown RBP13.01□□□□□ -0.33
CTCFL-212ENST00000539382 WDHD1O75717 1129 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-212ENST00000539382 PTGER2P43116 358 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 METAP2P50579 478 aaKnown RBP eCLIP13.01□□□□□ -0.333e-6■□□□□ 9.1
CTCFL-212ENST00000539382 TGFB2P61812 414 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 WTAPQ15007 396 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 USP17L1Q7RTZ2 530 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 GJB4Q9NTQ9 266 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 ZBTB43O43298 467 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 PDCP20941 246 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 NTRK3Q16288 839 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 RTKN2Q8IZC4 609 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 ZSCAN10Q96SZ4 725 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-212ENST00000539382 PSMD1Q99460 953 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 UBAC1Q9BSL1 405 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 PIM2Q9P1W9 311 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 SLC12A7Q9Y666 1083 aa13.01□□□□□ -0.33
CTCFL-212ENST00000539382 DDX60LQ5H9U9 1706 aaKnown RBP13.01□□□□□ -0.33
CTCFL-212ENST00000539382 NAV1Q8NEY1 1877 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 CCDC69A6NI79 296 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 PCP11498 1178 aaKnown RBP13□□□□□ -0.33
CTCFL-212ENST00000539382 POLD1P28340 1107 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 CRKP46108 304 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 CDC42EP5Q6NZY7 148 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 CNPY2Q9Y2B0 182 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 ROBO3Q96MS0 1386 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 PLCG2P16885 1265 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 HMGN5P82970 282 aaKnown RBP13□□□□□ -0.33
CTCFL-212ENST00000539382 GUCY1B3Q02153 619 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 DNM1Q05193 864 aaKnown RBP13□□□□□ -0.33
CTCFL-212ENST00000539382 PICALMQ13492 652 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 OTUD7BQ6GQQ9 843 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 HHIPL2Q6UWX4 724 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 CMTR1Q8N1G2 835 aaKnown RBP13□□□□□ -0.33
CTCFL-212ENST00000539382 FAM184AQ8NB25 1140 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 SUPT20HQ8NEM7 779 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 PHKBQ93100 1093 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 TEKT1Q969V4 418 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 AIFM3Q96NN9 605 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 GZF1Q9H116 711 aaPredicted RBP13□□□□□ -0.33
CTCFL-212ENST00000539382 IL17RBQ9NRM6 502 aa13□□□□□ -0.33
CTCFL-212ENST00000539382 GOLGA8AA7E2F4 631 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 POLR3DP05423 398 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-212ENST00000539382 NFIAQ12857 509 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 SART3Q15020 963 aaKnown RBP12.99□□□□□ -0.33
CTCFL-212ENST00000539382 RCSD1Q6JBY9 416 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 CERS3Q8IU89 383 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 ZNF654Q8IZM8 581 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 MTA3Q9BTC8 594 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 USP40Q9NVE5 1235 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 ERICH2A1L162 156 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 CPLX1O14810 134 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 RAD17O75943 681 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 SLURP2P0DP57 97 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 CACNB3P54284 484 aa12.99□□□□□ -0.33
CTCFL-212ENST00000539382 FKBP1AP62942 108 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms