RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 ZNF444Q8N0Y2 327 aaPredicted RBP12.11□□□□□ -0.47
CLPB-210ENST00000539148 ZNF526Q8TF50 670 aaPredicted RBP12.11□□□□□ -0.47
CLPB-210ENST00000539148 CCDC17Q96LX7 622 aa12.11□□□□□ -0.47
CLPB-210ENST00000539148 C22orf23Q9BZE7 217 aa12.11□□□□□ -0.47
CLPB-210ENST00000539148 MKNK2Q9HBH9 465 aa12.11□□□□□ -0.47
CLPB-210ENST00000539148 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
CLPB-210ENST00000539148 MKRN1Q9UHC7 482 aaKnown RBP12.11□□□□□ -0.47
CLPB-210ENST00000539148 TRPM7Q96QT4 1865 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 ROBO3Q96MS0 1386 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
CLPB-210ENST00000539148 HIRAP54198 1017 aaPredicted RBP12.1□□□□□ -0.47
CLPB-210ENST00000539148 CACNB3P54284 484 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 NFIAQ12857 509 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 AKNAD1Q5T1N1 836 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 CREB3L3Q68CJ9 461 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 NCOA7Q8NI08 942 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 ESR2Q92731 530 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 TOMM22Q9NS69 142 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 GINM1Q9NU53 330 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 SAP30BPQ9UHR5 308 aaKnown RBP12.1□□□□□ -0.47
CLPB-210ENST00000539148 PALD1Q9ULE6 856 aa12.1□□□□□ -0.47
CLPB-210ENST00000539148 ERICH2A1L162 156 aa12.09□□□□□ -0.47
CLPB-210ENST00000539148 POTECB2RU33 542 aa12.09□□□□□ -0.47
CLPB-210ENST00000539148 SLC27A2O14975 620 aa12.09□□□□□ -0.47
CLPB-210ENST00000539148 EGFRP00533 1210 aa12.09□□□□□ -0.47
CLPB-210ENST00000539148 IQCA1Q86XH1 822 aa12.09□□□□□ -0.47
CLPB-210ENST00000539148 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
CLPB-210ENST00000539148 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLPB-210ENST00000539148 EPB41L4AQ9HCS5 686 aaPredicted RBP12.09□□□□□ -0.47
CLPB-210ENST00000539148 CABP5Q9NP86 173 aa12.09□□□□□ -0.47
CLPB-210ENST00000539148 DDX4Q9NQI0 724 aaKnown RBP12.09□□□□□ -0.47
CLPB-210ENST00000539148 PCDHAC2Q9Y5I4 1007 aa12.09□□□□□ -0.47
CLPB-210ENST00000539148 CNTNAP1P78357 1384 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 UNCXA6NJT0 531 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 ORC4O43929 436 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 CYP21A2P08686 494 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 IREB2P48200 963 aaKnown RBP12.08□□□□□ -0.48
CLPB-210ENST00000539148 FKBP1BP68106 108 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 SMC1BQ8NDV3 1235 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 MTA3Q9BTC8 594 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 ZNF341Q9BYN7 854 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 TMEM39BQ9GZU3 492 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 IL25Q9H293 177 aa12.08□□□□□ -0.48
CLPB-210ENST00000539148 TSPY2A6NKD2 308 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 TOMM70O94826 608 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 TSPY3P0CV98 308 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 TSPY8P0CW00 308 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 HSPA6P17066 643 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 MCM5P33992 734 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 HAND2P61296 217 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 FGD1P98174 961 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 BLOC1S2Q6QNY1 142 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 ARMC9Q7Z3E5 817 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 USP48Q86UV5 1035 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 KCNB2Q92953 911 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 CHMP4CQ96CF2 233 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 ATAD5Q96QE3 1844 aa12.07□□□□□ -0.48
CLPB-210ENST00000539148 DDTLA6NHG4 134 aaPredicted RBP12.06□□□□□ -0.48
CLPB-210ENST00000539148 E7EWF7 191 aa12.06□□□□□ -0.48
CLPB-210ENST00000539148 FOXP2O15409 715 aa12.06□□□□□ -0.48
CLPB-210ENST00000539148 ST18O60284 1047 aa12.06□□□□□ -0.48
CLPB-210ENST00000539148 RANBP6O60518 1105 aaKnown RBP12.06□□□□□ -0.48
CLPB-210ENST00000539148 CDK8P49336 464 aa12.06□□□□□ -0.48
CLPB-210ENST00000539148 PLCD1P51178 756 aa12.06□□□□□ -0.48
CLPB-210ENST00000539148 MAP3K10Q02779 954 aa12.06□□□□□ -0.48
CLPB-210ENST00000539148 ANKRD1Q15327 319 aa12.06□□□□□ -0.48
CLPB-210ENST00000539148 CERKLQ49MI3 558 aaPredicted RBP12.06□□□□□ -0.48
CLPB-210ENST00000539148 METTL16Q86W50 562 aaKnown RBP12.06□□□□□ -0.48
CLPB-210ENST00000539148 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
CLPB-210ENST00000539148 UBAC1Q9BSL1 405 aa12.06□□□□□ -0.48
CLPB-210ENST00000539148 TBC1D2Q9BYX2 928 aa12.06□□□□□ -0.48
CLPB-210ENST00000539148 CTNND1O60716 968 aaKnown RBP12.05□□□□□ -0.48
CLPB-210ENST00000539148 SEC24BO95487 1268 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 ASNSP08243 561 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 FGRP09769 529 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 CTDSPL2Q05D32 466 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 FSTL1Q12841 308 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 TTLL12Q14166 644 aaPredicted RBP12.05□□□□□ -0.48
CLPB-210ENST00000539148 RABEP1Q15276 862 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 RRP12Q5JTH9 1297 aaKnown RBP12.05□□□□□ -0.48
CLPB-210ENST00000539148 C2orf69Q8N8R5 385 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 SNX21Q969T3 373 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 CDCA5Q96FF9 252 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 TMEM87BQ96K49 555 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 JAKMIP1Q96N16 626 aaKnown RBP12.05□□□□□ -0.48
CLPB-210ENST00000539148 TEPSINQ96N21 525 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 SH2D4AQ9H788 454 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 SNX14Q9Y5W7 946 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 CSADQ9Y600 493 aa12.05□□□□□ -0.48
CLPB-210ENST00000539148 ASTN2O75129 1339 aaPredicted RBP12.05□□□□□ -0.48
CLPB-210ENST00000539148 DOCK1Q14185 1865 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms