RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 PRELPP51888 382 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 ADGRA1Q86SQ6 560 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 CLEC10AQ8IUN9 316 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 SMC1BQ8NDV3 1235 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 RNF41Q9H4P4 317 aaPredicted RBP10.3□□□□□ -0.76
GGA3-202ENST00000538886 PI4KBQ9UBF8 816 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 SERPINA10Q9UK55 444 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 SPP2Q13103 211 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 UBE3CQ15386 1083 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 ZFPM1Q8IX07 1006 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 ESYT1Q9BSJ8 1104 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
GGA3-202ENST00000538886 ATP2B1P20020 1258 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 TMEM67Q5HYA8 995 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 LRRC47Q8N1G4 583 aaKnown RBP10.3□□□□□ -0.76
GGA3-202ENST00000538886 HOOK2Q96ED9 719 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 GBA2Q9HCG7 927 aaPredicted RBP10.3□□□□□ -0.76
GGA3-202ENST00000538886 TMOD4Q9NZQ9 345 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 PRDM4Q9UKN5 801 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 RTL9Q8NET4 1388 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 SBF2Q86WG5 1849 aa10.3□□□□□ -0.76
GGA3-202ENST00000538886 HSPD1P10809 573 aaKnown RBP10.29□□□□□ -0.76
GGA3-202ENST00000538886 ABCB5Q2M3G0 1257 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 CDAN1Q8IWY9 1227 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 ESR2Q92731 530 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 KAT14Q9H8E8 782 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 CCT2P78371 535 aaKnown RBP10.29□□□□□ -0.76
GGA3-202ENST00000538886 DHX37Q8IY37 1157 aaKnown RBP10.29□□□□□ -0.76
GGA3-202ENST00000538886 GPCPD1Q9NPB8 672 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 HOMER2Q9NSB8 354 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.29□□□□□ -0.76
GGA3-202ENST00000538886 SHANK3Q9BYB0 1731 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 TOMM70O94826 608 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 INPP5BP32019 993 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 IRX3P78415 501 aaPredicted RBP10.29□□□□□ -0.76
GGA3-202ENST00000538886 PTH1RQ03431 593 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 USP50Q70EL3 339 aaPredicted RBP10.29□□□□□ -0.76
GGA3-202ENST00000538886 RTFDC1Q9BY42 306 aaPredicted RBP10.29□□□□□ -0.76
GGA3-202ENST00000538886 HELLSQ9NRZ9 838 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
GGA3-202ENST00000538886 PPARAQ07869 468 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 LDHDQ86WU2 507 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 MAP7D2Q96T17 732 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 CYP46A1Q9Y6A2 500 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 DDTLA6NHG4 134 aaPredicted RBP10.28□□□□□ -0.76
GGA3-202ENST00000538886 PSMA5P28066 241 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 MCTP1Q6DN14 999 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 CPLX2Q6PUV4 134 aaKnown RBP10.28□□□□□ -0.76
GGA3-202ENST00000538886 HHIPL2Q6UWX4 724 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 HSCBQ8IWL3 235 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 MARCH6O60337 910 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 PLCD1P51178 756 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 IFIT1BQ5T764 474 aaKnown RBP10.28□□□□□ -0.76
GGA3-202ENST00000538886 APOBEC3HQ6NTF7 200 aaKnown RBP10.28□□□□□ -0.76
GGA3-202ENST00000538886 CDCA5Q96FF9 252 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 STRBPQ96SI9 672 aaKnown RBP10.28□□□□□ -0.76
GGA3-202ENST00000538886 DCP1AQ9NPI6 582 aaPredicted RBP10.28□□□□□ -0.76
GGA3-202ENST00000538886 KDM3BQ7LBC6 1761 aa10.28□□□□□ -0.76
GGA3-202ENST00000538886 ST18O60284 1047 aa10.27□□□□□ -0.76
GGA3-202ENST00000538886 ICA1Q05084 483 aa10.27□□□□□ -0.76
GGA3-202ENST00000538886 FAM184AQ8NB25 1140 aa10.27□□□□□ -0.76
GGA3-202ENST00000538886 NCOA7Q8NI08 942 aa10.27□□□□□ -0.76
GGA3-202ENST00000538886 MYL10Q9BUA6 226 aa10.27□□□□□ -0.76
GGA3-202ENST00000538886 ZNF341Q9BYN7 854 aa10.27□□□□□ -0.76
GGA3-202ENST00000538886 VPS33BQ9H267 617 aa10.27□□□□□ -0.76
GGA3-202ENST00000538886 HIRAP54198 1017 aaPredicted RBP10.27□□□□□ -0.77
GGA3-202ENST00000538886 CYP4F22Q6NT55 531 aa10.27□□□□□ -0.77
GGA3-202ENST00000538886 TRMT1LQ7Z2T5 733 aaKnown RBP10.27□□□□□ -0.77
GGA3-202ENST00000538886 ZMYM1Q5SVZ6 1142 aa10.27□□□□□ -0.77
GGA3-202ENST00000538886 ZDHHC15Q96MV8 337 aa10.27□□□□□ -0.77
GGA3-202ENST00000538886 ATP8A2Q9NTI2 1148 aa10.27□□□□□ -0.77
GGA3-202ENST00000538886 ZNF609O15014 1411 aa10.27□□□□□ -0.77
GGA3-202ENST00000538886 RIC1Q4ADV7 1423 aa10.27□□□□□ -0.77
GGA3-202ENST00000538886 SEPT2Q15019 361 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 KIFC2Q96AC6 838 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 DDX11Q96FC9 970 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 DDX4Q9NQI0 724 aaKnown RBP10.26□□□□□ -0.77
GGA3-202ENST00000538886 STAP2Q9UGK3 403 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 SLC12A7Q9Y666 1083 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 FAM205AQ6ZU69 1335 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 GOLGA8HP0CJ92 632 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 SLC1A4P43007 532 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 WTAPQ15007 396 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 CTCFLQ8NI51 663 aaPredicted RBP10.26□□□□□ -0.77
GGA3-202ENST00000538886 BRF1Q92994 677 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 NEK1Q96PY6 1258 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 OSBPL5Q9H0X9 879 aaPredicted RBP10.26□□□□□ -0.77
GGA3-202ENST00000538886 ARHGEF10LQ9HCE6 1279 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 FLT1P17948 1338 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 NUP98P52948 1817 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 SMIM22K7EJ46 135 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 IPO4Q8TEX9 1081 aaKnown RBP10.26□□□□□ -0.77
GGA3-202ENST00000538886 DHX36Q9H2U1 1008 aaKnown RBP10.26□□□□□ -0.77
GGA3-202ENST00000538886 ARPP21Q9UBL0 812 aaPredicted RBP10.26□□□□□ -0.77
GGA3-202ENST00000538886 TJP1Q07157 1748 aa10.26□□□□□ -0.77
GGA3-202ENST00000538886 hCG_1642624A0A1W2PR95 340 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 SGSM2O43147 1006 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 MRE11P49959 708 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 HMGCS2P54868 508 aa10.25□□□□□ -0.77
GGA3-202ENST00000538886 DEFB115Q30KQ5 88 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms