RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 EIF2AK2P19525 551 aaKnown RBP11.86□□□□□ -0.51
CD9-207ENST00000538418 PABPC4Q13310 644 aaKnown RBP eCLIP11.86□□□□□ -0.51
CD9-207ENST00000538418 MAP1SQ66K74 1059 aaPredicted RBP11.86□□□□□ -0.51
CD9-207ENST00000538418 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
CD9-207ENST00000538418 MORC4Q8TE76 937 aa11.86□□□□□ -0.51
CD9-207ENST00000538418 ABHD17AQ96GS6 310 aa11.86□□□□□ -0.51
CD9-207ENST00000538418 C8orf48Q96LL4 319 aa11.86□□□□□ -0.51
CD9-207ENST00000538418 ERICH3Q5RHP9 1530 aa11.86□□□□□ -0.51
CD9-207ENST00000538418 ALG1L2C9J202 215 aa11.85□□□□□ -0.51
CD9-207ENST00000538418 RFPL3O75679 317 aa11.85□□□□□ -0.51
CD9-207ENST00000538418 ESRRAP11474 423 aaPredicted RBP11.85□□□□□ -0.51
CD9-207ENST00000538418 SOX5P35711 763 aa11.85□□□□□ -0.51
CD9-207ENST00000538418 NFKB2Q00653 900 aa11.85□□□□□ -0.51
CD9-207ENST00000538418 CT47A1Q5JQC4 288 aaPredicted RBP11.85□□□□□ -0.51
CD9-207ENST00000538418 UNC5AQ6ZN44 842 aa11.85□□□□□ -0.51
CD9-207ENST00000538418 EPN3Q9H201 632 aa11.85□□□□□ -0.51
CD9-207ENST00000538418 IGFLR1Q9H665 355 aa11.85□□□□□ -0.51
CD9-207ENST00000538418 PHAXQ9H814 394 aaKnown RBP11.85□□□□□ -0.51
CD9-207ENST00000538418 MCM8Q9UJA3 840 aa11.85□□□□□ -0.51
CD9-207ENST00000538418 TOP2BQ02880 1626 aa11.85□□□□□ -0.51
CD9-207ENST00000538418 IQCA1LA6NCM1 817 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 SUSD5O60279 629 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 PTPRAP18433 802 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 PMLP29590 882 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 CDK8P49336 464 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 MLECQ14165 292 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 ZYXQ15942 572 aaKnown RBP11.84□□□□□ -0.51
CD9-207ENST00000538418 SLC10A6Q3KNW5 377 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 INTS3Q68E01 1043 aaKnown RBP11.84□□□□□ -0.51
CD9-207ENST00000538418 TRIM46Q7Z4K8 759 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 ZFP42Q96MM3 310 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 ADAM19Q9H013 955 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 DNAJB12Q9NXW2 375 aaKnown RBP11.84□□□□□ -0.51
CD9-207ENST00000538418 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 LTBP3Q9NS15 1303 aa11.84□□□□□ -0.51
CD9-207ENST00000538418 GFRA2O00451 464 aa11.83□□□□□ -0.52
CD9-207ENST00000538418 PDE8AO60658 829 aa11.83□□□□□ -0.52
CD9-207ENST00000538418 ACRP10323 421 aa11.83□□□□□ -0.52
CD9-207ENST00000538418 CBX2Q14781 532 aaPredicted RBP11.83□□□□□ -0.52
CD9-207ENST00000538418 RAVER1Q8IY67 606 aaKnown RBP11.83□□□□□ -0.52
CD9-207ENST00000538418 CACNA2D2Q9NY47 1150 aa11.83□□□□□ -0.52
CD9-207ENST00000538418 GMIPQ9P107 970 aa11.83□□□□□ -0.52
CD9-207ENST00000538418 GSTP1P09211 210 aaKnown RBP11.82□□□□□ -0.52
CD9-207ENST00000538418 SELPP16109 830 aa11.82□□□□□ -0.52
CD9-207ENST00000538418 AP3B2Q13367 1082 aa11.82□□□□□ -0.52
CD9-207ENST00000538418 DBN1Q16643 649 aa11.82□□□□□ -0.52
CD9-207ENST00000538418 FAM182BQ5T319 152 aa11.82□□□□□ -0.52
CD9-207ENST00000538418 OVOS1Q6IE37 1185 aa11.82□□□□□ -0.52
CD9-207ENST00000538418 MICALL1Q8N3F8 863 aa11.82□□□□□ -0.52
CD9-207ENST00000538418 UBE2OQ9C0C9 1292 aaKnown RBP11.82□□□□□ -0.52
CD9-207ENST00000538418 ATXN7L1Q9ULK2 861 aaPredicted RBP11.82□□□□□ -0.52
CD9-207ENST00000538418 CORINQ9Y5Q5 1042 aa11.82□□□□□ -0.52
CD9-207ENST00000538418 A0A0G2JS52 829 aa11.81□□□□□ -0.52
CD9-207ENST00000538418 NME1P15531 152 aaKnown RBP11.81□□□□□ -0.52
CD9-207ENST00000538418 KIAA1211LQ6NV74 962 aa11.81□□□□□ -0.52
CD9-207ENST00000538418 RNF180Q86T96 592 aa11.81□□□□□ -0.52
CD9-207ENST00000538418 PMM1Q92871 262 aa11.81□□□□□ -0.52
CD9-207ENST00000538418 ATG4CQ96DT6 458 aa11.81□□□□□ -0.52
CD9-207ENST00000538418 KIF2CQ99661 725 aa11.81□□□□□ -0.52
CD9-207ENST00000538418 PCDHB10Q9UN67 800 aa11.81□□□□□ -0.52
CD9-207ENST00000538418 PCDHA4Q9UN74 947 aa11.81□□□□□ -0.52
CD9-207ENST00000538418 SLC22A31A6NKX4 558 aa11.8□□□□□ -0.52
CD9-207ENST00000538418 TBC1D8BQ0IIM8 1120 aa11.8□□□□□ -0.52
CD9-207ENST00000538418 IKBKEQ14164 716 aa11.8□□□□□ -0.52
CD9-207ENST00000538418 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
CD9-207ENST00000538418 WIPI1Q5MNZ9 446 aaPredicted RBP11.8□□□□□ -0.52
CD9-207ENST00000538418 NLRC3Q7RTR2 1065 aa11.8□□□□□ -0.52
CD9-207ENST00000538418 UBR7Q8N806 425 aa11.8□□□□□ -0.52
CD9-207ENST00000538418 NCOA5Q9HCD5 579 aaKnown RBP11.8□□□□□ -0.52
CD9-207ENST00000538418 REV1Q9UBZ9 1251 aa11.8□□□□□ -0.52
CD9-207ENST00000538418 SNCAIPQ9Y6H5 919 aa11.8□□□□□ -0.52
CD9-207ENST00000538418 BIVM-ERCC5R4GMW8 1640 aa11.79□□□□□ -0.52
CD9-207ENST00000538418 TNFRSF10CO14798 259 aa11.79□□□□□ -0.52
CD9-207ENST00000538418 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
CD9-207ENST00000538418 FOXB2Q5VYV0 432 aa11.79□□□□□ -0.52
CD9-207ENST00000538418 TRIM22Q8IYM9 498 aa11.79□□□□□ -0.52
CD9-207ENST00000538418 ZNF526Q8TF50 670 aaPredicted RBP11.79□□□□□ -0.52
CD9-207ENST00000538418 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
CD9-207ENST00000538418 RELTQ969Z4 430 aa11.79□□□□□ -0.52
CD9-207ENST00000538418 WASHC2CQ9Y4E1 1318 aa11.79□□□□□ -0.52
CD9-207ENST00000538418 ADAMTS12P58397 1594 aa11.79□□□□□ -0.52
CD9-207ENST00000538418 CEP170Q5SW79 1584 aa11.79□□□□□ -0.52
CD9-207ENST00000538418 FAM177BA6PVY3 158 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 PLD2O14939 933 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 L1CAMP32004 1257 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 FNDC3BQ53EP0 1204 aaKnown RBP11.78□□□□□ -0.52
CD9-207ENST00000538418 AKAP4Q5JQC9 854 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 GPBAR1Q8TDU6 330 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 KLHL6Q8WZ60 621 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 KISS1RQ969F8 398 aaPredicted RBP11.78□□□□□ -0.52
CD9-207ENST00000538418 ACSBG1Q96GR2 724 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 LACRTQ9GZZ8 138 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 CNNM2Q9H8M5 875 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 MAPRE3Q9UPY8 281 aa11.78□□□□□ -0.52
CD9-207ENST00000538418 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.52
CD9-207ENST00000538418 SLC35F4A4IF30 521 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 GSG1L2A8MUP6 293 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 CPB1P15086 417 aa11.77□□□□□ -0.53
CD9-207ENST00000538418 PLCG1P19174 1290 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms