RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CDC42BPAQ5VT25 1732 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 FLOT1O75955 427 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 UBXN1Q04323 297 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 PABPC4Q13310 644 aaKnown RBP eCLIP6.04□□□□□ -1.44
LRP6-203ENST00000538239 OTUD7BQ6GQQ9 843 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 CCDC50Q8IVM0 306 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 CHURC1Q8WUH1 139 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 ERBB3P21860 1342 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 PSDA5PKW4 1024 aaPredicted RBP6.04□□□□□ -1.44
LRP6-203ENST00000538239 GOLGA8HP0CJ92 632 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 IFI16Q16666 785 aaKnown RBP6.04□□□□□ -1.44
LRP6-203ENST00000538239 HAUS3Q68CZ6 603 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 GLG1Q92896 1179 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 KCNJ14Q9UNX9 436 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 TET3O43151 1660 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 CLTCQ00610 1675 aaKnown RBP6.04□□□□□ -1.44
LRP6-203ENST00000538239 LPXNO60711 386 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 DNM2P50570 870 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 GSDMDP57764 484 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 CALCRLQ16602 461 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 TAOK3Q9H2K8 898 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 TTC12Q9H892 705 aaPredicted RBP6.04□□□□□ -1.44
LRP6-203ENST00000538239 KIF4AO95239 1232 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 EPB41P11171 864 aaKnown RBP6.04□□□□□ -1.44
LRP6-203ENST00000538239 PHKA1P46020 1223 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 WDR44Q5JSH3 913 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 ANKRD35Q8N283 1001 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 RNF169Q8NCN4 708 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 NEK11Q8NG66 645 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 TRPC6Q9Y210 931 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 SSX2IPQ9Y2D8 614 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 CEP83Q9Y592 693 aa6.04□□□□□ -1.44
LRP6-203ENST00000538239 ARID4AP29374 1257 aaPredicted RBP6.03□□□□□ -1.44
LRP6-203ENST00000538239 ICA1Q05084 483 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 PDE4DQ08499 809 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 ABCB5Q2M3G0 1257 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 BEND3Q5T5X7 828 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 UTP14CQ5TAP6 766 aaKnown RBP6.03□□□□□ -1.44
LRP6-203ENST00000538239 ARMC9Q7Z3E5 817 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 SMC5Q8IY18 1101 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 CSRNP1Q96S65 589 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 CRACR2AQ9BSW2 395 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.03□□□□□ -1.446e-7■■□□□ 13.2
LRP6-203ENST00000538239 A0A1B0GVL5 298 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 TRPC3Q13507 836 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 NONOQ15233 471 aaKnown RBP eCLIP6.03□□□□□ -1.44
LRP6-203ENST00000538239 TTC38Q5R3I4 469 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 CCDC117Q8IWD4 279 aaPredicted RBP6.03□□□□□ -1.44
LRP6-203ENST00000538239 SPICE1Q8N0Z3 855 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 IQUBQ8NA54 791 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 LRRC45Q96CN5 670 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 VPS54Q9P1Q0 977 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 E7EWF7 191 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 KRT9P35527 623 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 CDAN1Q8IWY9 1227 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 IFNL3Q8IZI9 196 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 RNF34Q969K3 372 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 C16orf45Q96MC5 204 aaPredicted RBP6.03□□□□□ -1.44
LRP6-203ENST00000538239 SEC62Q99442 399 aaKnown RBP6.03□□□□□ -1.44
LRP6-203ENST00000538239 LEMD3Q9Y2U8 911 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 CEP152O94986 1710 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 DKC1O60832 514 aaKnown RBP eCLIP6.03□□□□□ -1.44
LRP6-203ENST00000538239 ATP5JP18859 108 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 OSBPP22059 807 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 RBM6P78332 1123 aaKnown RBP6.03□□□□□ -1.44
LRP6-203ENST00000538239 UBE4AQ14139 1066 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 NLRX1Q86UT6 975 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 KIF18AQ8NI77 898 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 SNX29Q8TEQ0 813 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 ZSCAN10Q96SZ4 725 aaPredicted RBP6.03□□□□□ -1.44
LRP6-203ENST00000538239 GLT8D2Q9H1C3 349 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 CWC15Q9P013 229 aaKnown RBP6.03□□□□□ -1.44
LRP6-203ENST00000538239 TRAF5O00463 557 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 KRT19P08727 400 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 HSPA1LP34931 641 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 PLCD1P51178 756 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 GIGYF2Q6Y7W6 1299 aaKnown RBP6.03□□□□□ -1.44
LRP6-203ENST00000538239 MIGA2Q7L4E1 593 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 DYMQ7RTS9 669 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 TPH2Q8IWU9 490 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 MYCT1Q8N699 235 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 TTLL6Q8N841 843 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 LZTS2Q9BRK4 669 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 MAPK8IP1Q9UQF2 711 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 AOX1Q06278 1338 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 IGSF1Q8N6C5 1336 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 ADCY10Q96PN6 1610 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 SMCO2A6NFE2 343 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 GDF11O95390 407 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 NPR1P16066 1061 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 PDE6AP16499 860 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 GSTA5Q7RTV2 222 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 DPP9Q86TI2 863 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 USP44Q9H0E7 712 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 PIM2Q9P1W9 311 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 SYNMO15061 1565 aa6.03□□□□□ -1.44
LRP6-203ENST00000538239 CYLC1P35663 651 aaPredicted RBP6.02□□□□□ -1.45
LRP6-203ENST00000538239 C8orf34Q49A92 452 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 KRT25Q7Z3Z0 450 aa6.02□□□□□ -1.45
LRP6-203ENST00000538239 TSNARE1Q96NA8 513 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms