RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 ERCC3P19447 782 aa6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 ZC3H6P61129 1189 aaKnown RBP6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 FMR1Q06787 632 aaKnown RBP eCLIP6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 C8orf34Q49A92 452 aa6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 RNFT1Q5M7Z0 435 aa6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 ZNF530Q6P9A1 599 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 TSPYL6Q8N831 410 aa6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 LRRC59Q96AG4 307 aaKnown RBP6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 ZFATQ9P243 1243 aa6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 NOB1Q9ULX3 412 aaKnown RBP6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 COL5A2P05997 1499 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 MRC1P22897 1456 aa6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 MEGF6O75095 1541 aa6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 ABCC4O15439 1325 aa6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 CACNA1FO60840 1977 aa6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 SCN11AQ9UI33 1791 aa6.95□□□□□ -1.3
NPIPB3-208ENST00000537983 PLCH1Q4KWH8 1693 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 PXDNLA1KZ92 1463 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 TCERG1O14776 1098 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 HOXB7P09629 217 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 MX2P20592 715 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 KRT76Q01546 638 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 C1orf141Q5JVX7 400 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 ITPRIPQ8IWB1 547 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 C8orf58Q8NAV2 365 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 SLC16A10Q8TF71 515 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 COL25A1Q9BXS0 654 aaPredicted RBP6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 API5Q9BZZ5 524 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 ELP3Q9H9T3 547 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 EFCC1Q9HA90 598 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 TMEM63CQ9P1W3 806 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 COL14A1Q05707 1796 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 PTPRCP08575 1304 aa6.94□□□□□ -1.3
NPIPB3-208ENST00000537983 RGS12O14924 1447 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 TNFRSF21O75509 655 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 SASH3O75995 380 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 NFKB1P19838 968 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 COL19A1Q14993 1142 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 TAF7Q15545 349 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 ZNF438Q7Z4V0 828 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 RAB44Q7Z6P3 723 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 IL17REQ8NFR9 667 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 RAPGEF4Q8WZA2 1011 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 IRF7Q92985 503 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 CHMP4AQ9BY43 222 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 PRDM11Q9NQV5 511 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 TNNQ9UQP3 1299 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 WDR17Q8IZU2 1322 aa6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 COL16A1Q07092 1604 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-208ENST00000537983 RNMTO43148 476 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 MAP3K6O95382 1288 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 P4HBP07237 508 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 BMP4P12644 408 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 TARSP26639 723 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 ZNF468Q5VIY5 522 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 KRT25Q7Z3Z0 450 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 FBXO33Q7Z6M2 555 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 TMEM57Q8N5G2 664 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 TTC16Q8NEE8 873 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 SNX29Q8TEQ0 813 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 BHMTQ93088 406 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 NIF3L1Q9GZT8 377 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 CHRDQ9H2X0 955 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 AVENQ9NQS1 362 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 NLRP2Q9NX02 1062 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 FOXD3Q9UJU5 478 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 SPG7Q9UQ90 795 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 PHLPP1O60346 1717 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 WNK3Q9BYP7 1800 aa6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 KDM6AO15550 1401 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-208ENST00000537983 SHANK3Q9BYB0 1731 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 ELL2O00472 640 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 MMP20O60882 483 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 RARAP10276 462 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 HOXD8P13378 290 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 TEFQ10587 303 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 ORC1Q13415 861 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 CHRNA2Q15822 529 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 KRT24Q2M2I5 525 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 CCDC30Q5VVM6 783 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 ZNF775Q96BV0 537 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 STK31Q9BXU1 1019 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 RWDD1Q9H446 243 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 ABI2Q9NYB9 513 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 CNTN3Q9P232 1028 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 KLF15Q9UIH9 416 aa6.91□□□□□ -1.3
NPIPB3-208ENST00000537983 PAPPAQ13219 1627 aa6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 LAMB4A4D0S4 1761 aa6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 HSP90AB1P08238 724 aaKnown RBP6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 ARAFP10398 606 aa6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 MAP2K3P46734 347 aa6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 PLCB3Q01970 1234 aa6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 HDAC1Q13547 482 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 LCE2AQ5TA79 106 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 OR13H1Q8NG92 308 aa6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 PNMA5Q96PV4 448 aa6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 MDFIQ99750 246 aa6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 ZBTB40Q9NUA8 1239 aa6.9□□□□□ -1.3
NPIPB3-208ENST00000537983 PCDH11XQ9BZA7 1347 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms