RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.13■□□□□ 0.49
MKS1-204ENST00000537529 NUP133Q8WUM0 1156 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 ATP8A2Q9NTI2 1148 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 XDHP47989 1333 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 CYP2D7A0A087X1C5 515 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.13■□□□□ 0.49
MKS1-204ENST00000537529 A0A1B0GVL5 298 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 GOLGA6L6A8MZA4 724 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 SLC3A2P08195 630 aaKnown RBP18.13■□□□□ 0.49
MKS1-204ENST00000537529 PRDX5P30044 214 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 NBPF11Q86T75 865 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 IQCA1Q86XH1 822 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 DZIP1Q86YF9 867 aaKnown RBP18.13■□□□□ 0.49
MKS1-204ENST00000537529 CRACR2BQ8N4Y2 399 aaPredicted RBP18.13■□□□□ 0.49
MKS1-204ENST00000537529 NAP1L5Q96NT1 182 aaPredicted RBP18.13■□□□□ 0.49
MKS1-204ENST00000537529 LRRC4BQ9NT99 713 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 ANO10Q9NW15 660 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 AATFQ9NY61 560 aaKnown RBP eCLIP18.13■□□□□ 0.49
MKS1-204ENST00000537529 TAOK2Q9UL54 1235 aa18.13■□□□□ 0.49
MKS1-204ENST00000537529 PPP6R2O75170 966 aa18.12■□□□□ 0.49
MKS1-204ENST00000537529 OFD1O75665 1012 aa18.12■□□□□ 0.49
MKS1-204ENST00000537529 MMP1P03956 469 aa18.12■□□□□ 0.49
MKS1-204ENST00000537529 CMA1P23946 247 aa18.12■□□□□ 0.49
MKS1-204ENST00000537529 KIAA2012Q0VF49 1180 aa18.12■□□□□ 0.49
MKS1-204ENST00000537529 TXNRD3Q86VQ6 643 aa18.12■□□□□ 0.49
MKS1-204ENST00000537529 WDR66Q8TBY9 1149 aa18.12■□□□□ 0.49
MKS1-204ENST00000537529 RPGRQ92834 1020 aaKnown RBP18.12■□□□□ 0.49
MKS1-204ENST00000537529 SDF4Q9BRK5 362 aa18.12■□□□□ 0.49
MKS1-204ENST00000537529 ARPP21Q9UBL0 812 aaPredicted RBP18.12■□□□□ 0.49
MKS1-204ENST00000537529 USP17L12C9JPN9 530 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 USP17L21D6R901 530 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 ORC4O43929 436 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 HSPA1LP34931 641 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 AXDND1Q5T1B0 1012 aaPredicted RBP18.11■□□□□ 0.49
MKS1-204ENST00000537529 IFIT1BQ5T764 474 aaKnown RBP18.11■□□□□ 0.49
MKS1-204ENST00000537529 PRR5LQ6MZQ0 368 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 CATIPQ7Z7H3 387 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 ENAHQ8N8S7 591 aaPredicted RBP18.11■□□□□ 0.49
MKS1-204ENST00000537529 DCP1AQ9NPI6 582 aaPredicted RBP18.11■□□□□ 0.49
MKS1-204ENST00000537529 CALM1P0DP23 149 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 CALM2P0DP24 149 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 CALM3P0DP25 149 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 ST5P78524 1137 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 ZNF804AQ7Z570 1209 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 NOSTRINQ8IVI9 506 aa18.11■□□□□ 0.49
MKS1-204ENST00000537529 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.11■□□□□ 0.49
MKS1-204ENST00000537529 GOLGA6L19H0YKK7 550 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 GUCY1A2P33402 732 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 PTPAQ15257 358 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 SBK1Q52WX2 424 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 SLC27A3Q5K4L6 730 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 CERKQ8TCT0 537 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 MAP3K14Q99558 947 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 RNF26Q9BY78 433 aaPredicted RBP18.1■□□□□ 0.49
MKS1-204ENST00000537529 RBM28Q9NW13 759 aaKnown RBP18.1■□□□□ 0.49
MKS1-204ENST00000537529 LAMB1P07942 1786 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 UBE2Q2LH0YL09 131 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 SMIM22K7EJ46 135 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 PFKFB1P16118 471 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 AKAP17AQ02040 695 aaKnown RBP18.1■□□□□ 0.49
MKS1-204ENST00000537529 C11orf57Q6ZUT1 292 aaPredicted RBP18.1■□□□□ 0.49
MKS1-204ENST00000537529 C15orf52Q6ZUT6 534 aaKnown RBP18.1■□□□□ 0.49
MKS1-204ENST00000537529 CEP57L1Q8IYX8 460 aa18.1■□□□□ 0.49
MKS1-204ENST00000537529 FOXP1Q9H334 677 aaPredicted RBP18.1■□□□□ 0.49
MKS1-204ENST00000537529 KIAA1551Q9HCM1 1747 aa18.09■□□□□ 0.49
MKS1-204ENST00000537529 PRDM1O75626 825 aa18.09■□□□□ 0.49
MKS1-204ENST00000537529 DDAH1O94760 285 aa18.09■□□□□ 0.49
MKS1-204ENST00000537529 LDHBP07195 334 aaKnown RBP18.09■□□□□ 0.49
MKS1-204ENST00000537529 MARCKSP29966 332 aaPredicted RBP18.09■□□□□ 0.49
MKS1-204ENST00000537529 GSTO1P78417 241 aa18.09■□□□□ 0.49
MKS1-204ENST00000537529 ZRSR1Q15695 479 aaKnown RBP18.09■□□□□ 0.49
MKS1-204ENST00000537529 DIS3L2Q8IYB7 885 aaKnown RBP18.09■□□□□ 0.49
MKS1-204ENST00000537529 NAT10Q9H0A0 1025 aaKnown RBP18.09■□□□□ 0.49
MKS1-204ENST00000537529 MROH7-TTC4A0A0A0MT08 1334 aa18.09■□□□□ 0.49
MKS1-204ENST00000537529 BAZ2AQ9UIF9 1905 aaKnown RBP18.09■□□□□ 0.49
MKS1-204ENST00000537529 CCDC88AQ3V6T2 1871 aa18.08■□□□□ 0.49
MKS1-204ENST00000537529 UBR3Q6ZT12 1888 aa18.08■□□□□ 0.49
MKS1-204ENST00000537529 WDHD1O75717 1129 aaPredicted RBP18.08■□□□□ 0.49
MKS1-204ENST00000537529 ZNF202O95125 648 aa18.08■□□□□ 0.49
MKS1-204ENST00000537529 GYS1P13807 737 aa18.08■□□□□ 0.49
MKS1-204ENST00000537529 IQCB1Q15051 598 aa18.08■□□□□ 0.49
MKS1-204ENST00000537529 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.08■□□□□ 0.49
MKS1-204ENST00000537529 MPNDQ8N594 471 aa18.08■□□□□ 0.49
MKS1-204ENST00000537529 JAG2Q9Y219 1238 aa18.08■□□□□ 0.49
MKS1-204ENST00000537529 DLEC1Q9Y238 1755 aa18.08■□□□□ 0.48
MKS1-204ENST00000537529 CUTAO60888 179 aa18.08■□□□□ 0.48
MKS1-204ENST00000537529 XBP1P17861 261 aa18.08■□□□□ 0.48
MKS1-204ENST00000537529 ZNF75DP51815 510 aa18.08■□□□□ 0.48
MKS1-204ENST00000537529 PDE4BQ07343 736 aa18.08■□□□□ 0.48
MKS1-204ENST00000537529 CRY2Q49AN0 593 aa18.08■□□□□ 0.48
MKS1-204ENST00000537529 CCDC82Q8N4S0 544 aa18.08■□□□□ 0.48
MKS1-204ENST00000537529 RBM17Q96I25 401 aaKnown RBP18.08■□□□□ 0.48
MKS1-204ENST00000537529 TIGD1Q96MW7 591 aa18.08■□□□□ 0.48
MKS1-204ENST00000537529 TRIM5Q9C035 493 aa18.08■□□□□ 0.48
MKS1-204ENST00000537529 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.08■□□□□ 0.48
MKS1-204ENST00000537529 KCNJ14Q9UNX9 436 aa18.08■□□□□ 0.48
MKS1-204ENST00000537529 BTBD18B2RXH4 712 aa18.07■□□□□ 0.48
MKS1-204ENST00000537529 NT5C2P49902 561 aa18.07■□□□□ 0.48
MKS1-204ENST00000537529 PLA2G4DQ86XP0 818 aa18.07■□□□□ 0.48
MKS1-204ENST00000537529 CMTR1Q8N1G2 835 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms