RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 NRXN2Q9P2S2 1712 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 CCDC196A0A1B0GTZ2 297 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 GRAPQ13588 217 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 SBK1Q52WX2 424 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 GRAPLQ8TC17 118 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-207ENST00000537063 TIGD1Q96MW7 591 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 TNKSO95271 1327 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 FOCADQ5VW36 1801 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 ERICH2A1L162 156 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 WDHD1O75717 1129 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-207ENST00000537063 DEXIO95424 95 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 FUT2Q10981 343 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 NFIXQ14938 502 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 TRAPPC3LQ5T215 181 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 ENAHQ8N8S7 591 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-207ENST00000537063 FANCBQ8NB91 859 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 SLC26A6Q9BXS9 759 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 ROBO3Q96MS0 1386 aa10.79□□□□□ -0.68
UBE3B-207ENST00000537063 UBE2Q2LH0YL09 131 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 SMIM22K7EJ46 135 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 GUCY1A2P33402 732 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 NT5C2P49902 561 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 KIAA2012Q0VF49 1180 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 SF3A1Q15459 793 aaKnown RBP10.78□□□□□ -0.68
UBE3B-207ENST00000537063 FAM182BQ5T319 152 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 PIBF1Q8WXW3 757 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 ZSCAN10Q96SZ4 725 aaPredicted RBP10.78□□□□□ -0.68
UBE3B-207ENST00000537063 ZKSCAN3Q9BRR0 538 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 FOXP1Q9H334 677 aaPredicted RBP10.78□□□□□ -0.68
UBE3B-207ENST00000537063 LRRC4BQ9NT99 713 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 ATP8A2Q9NTI2 1148 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 AFF2P51816 1311 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 A0A1B0GVL5 298 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 ZNF75DP51815 510 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 CRY2Q49AN0 593 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 RRP12Q5JTH9 1297 aaKnown RBP10.78□□□□□ -0.68
UBE3B-207ENST00000537063 TXNRD3Q86VQ6 643 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 BPIFA3Q9BQP9 254 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 UBAC1Q9BSL1 405 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 RNF26Q9BY78 433 aaPredicted RBP10.78□□□□□ -0.68
UBE3B-207ENST00000537063 KCNF1Q9H3M0 494 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 ANO10Q9NW15 660 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 LEMD3Q9Y2U8 911 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 PFKFB1P16118 471 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 RFC4P35249 363 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 TRIM29Q14134 588 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 NOSTRINQ8IVI9 506 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 DHX40Q8IX18 779 aaKnown RBP10.78□□□□□ -0.68
UBE3B-207ENST00000537063 DCP1AQ9NPI6 582 aaPredicted RBP10.78□□□□□ -0.68
UBE3B-207ENST00000537063 SPTLC3Q9NUV7 552 aa10.78□□□□□ -0.68
UBE3B-207ENST00000537063 RESP18Q5W5W9 173 aa10.77□□□□□ -0.68
UBE3B-207ENST00000537063 TRIM22Q8IYM9 498 aa10.77□□□□□ -0.68
UBE3B-207ENST00000537063 TFCP2L1Q9NZI6 479 aa10.77□□□□□ -0.68
UBE3B-207ENST00000537063 MKRN1Q9UHC7 482 aaKnown RBP10.77□□□□□ -0.68
UBE3B-207ENST00000537063 QSER1Q2KHR3 1735 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 MINDY4BA8MYZ0 360 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 DDAH1O94760 285 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 PRDX5P30044 214 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 FAM196AQ6ZSG2 479 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 JMYQ8N9B5 988 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 CRNKL1Q9BZJ0 848 aaKnown RBP10.77□□□□□ -0.69
UBE3B-207ENST00000537063 KIAA1468Q9P260 1216 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 ARPP21Q9UBL0 812 aaPredicted RBP10.77□□□□□ -0.69
UBE3B-207ENST00000537063 ANKRD31Q8N7Z5 1873 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 SPTY2D1Q68D10 685 aaPredicted RBP10.77□□□□□ -0.69
UBE3B-207ENST00000537063 SHC4Q6S5L8 630 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 ELOA2Q8IYF1 753 aaPredicted RBP10.77□□□□□ -0.69
UBE3B-207ENST00000537063 SHISA4Q96DD7 197 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 XDHP47989 1333 aa10.77□□□□□ -0.69
UBE3B-207ENST00000537063 CYP2D7A0A087X1C5 515 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 ZNF202O95125 648 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 TOB1P50616 345 aaPredicted RBP10.76□□□□□ -0.69
UBE3B-207ENST00000537063 PRR5LQ6MZQ0 368 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 CNBD1Q8NA66 436 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 TOMM22Q9NS69 142 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 GOLGA6L6A8MZA4 724 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 CUTAO60888 179 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 CALM1P0DP23 149 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 CALM2P0DP24 149 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 CALM3P0DP25 149 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 TROAPQ12815 778 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 SEPT12Q8IYM1 358 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 CCDC24Q8N4L8 307 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 TTC12Q9H892 705 aaPredicted RBP10.76□□□□□ -0.69
UBE3B-207ENST00000537063 RBM28Q9NW13 759 aaKnown RBP10.76□□□□□ -0.69
UBE3B-207ENST00000537063 TRPC5Q9UL62 973 aaPredicted RBP10.76□□□□□ -0.69
UBE3B-207ENST00000537063 USP17L12C9JPN9 530 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 USP17L21D6R901 530 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 RBM6P78332 1123 aaKnown RBP10.76□□□□□ -0.69
UBE3B-207ENST00000537063 PKN1Q16512 942 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 MRFAP1L1Q96HT8 127 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 TUBE1Q9UJT0 475 aa10.76□□□□□ -0.69
UBE3B-207ENST00000537063 PRPF3O43395 683 aaKnown RBP10.75□□□□□ -0.69
UBE3B-207ENST00000537063 SLC27A3Q5K4L6 730 aa10.75□□□□□ -0.69
UBE3B-207ENST00000537063 DIS3L2Q8IYB7 885 aaKnown RBP10.75□□□□□ -0.69
UBE3B-207ENST00000537063 CEP57L1Q8IYX8 460 aa10.75□□□□□ -0.69
UBE3B-207ENST00000537063 STK11IPQ8N1F8 1099 aa10.75□□□□□ -0.69
UBE3B-207ENST00000537063 WDR66Q8TBY9 1149 aa10.75□□□□□ -0.69
UBE3B-207ENST00000537063 AATFQ9NY61 560 aaKnown RBP eCLIP10.75□□□□□ -0.69
UBE3B-207ENST00000537063 GYS1P13807 737 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms