RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CEP44Q9C0F1 390 aa10.03□□□□□ -0.8
CCDC7-208ENST00000537047 PICK1Q9NRD5 415 aa10.03□□□□□ -0.8
CCDC7-208ENST00000537047 ZNF648Q5T619 568 aaPredicted RBP10.02□□□□□ -0.81
CCDC7-208ENST00000537047 PCNX4Q63HM2 1172 aa10.02□□□□□ -0.81
CCDC7-208ENST00000537047 ATG4DQ86TL0 474 aaPredicted RBP10.02□□□□□ -0.81
CCDC7-208ENST00000537047 TNKS2Q9H2K2 1166 aa10.02□□□□□ -0.81
CCDC7-208ENST00000537047 PPM1HQ9ULR3 514 aa10.02□□□□□ -0.81
CCDC7-208ENST00000537047 TMEM265A0A087WTH1 108 aa10.01□□□□□ -0.81
CCDC7-208ENST00000537047 EOMESO95936 686 aa10.01□□□□□ -0.81
CCDC7-208ENST00000537047 P4HBP07237 508 aaKnown RBP10.01□□□□□ -0.81
CCDC7-208ENST00000537047 ZSCAN29Q8IWY8 852 aaPredicted RBP10.01□□□□□ -0.81
CCDC7-208ENST00000537047 SPACA3Q8IXA5 215 aa10.01□□□□□ -0.81
CCDC7-208ENST00000537047 SRCIN1Q9C0H9 1055 aa10.01□□□□□ -0.81
CCDC7-208ENST00000537047 USP17L7P0C7H9 530 aa10□□□□□ -0.81
CCDC7-208ENST00000537047 CDK8P49336 464 aa10□□□□□ -0.81
CCDC7-208ENST00000537047 NKPD1Q17RQ9 610 aa10□□□□□ -0.81
CCDC7-208ENST00000537047 ALG1LQ6GMV1 187 aa10□□□□□ -0.81
CCDC7-208ENST00000537047 LRFN4Q6PJG9 635 aa10□□□□□ -0.81
CCDC7-208ENST00000537047 PDZRN4Q6ZMN7 1036 aaPredicted RBP10□□□□□ -0.81
CCDC7-208ENST00000537047 C12orf49Q9H741 205 aa10□□□□□ -0.81
CCDC7-208ENST00000537047 FBRSQ9HAH7 460 aa10□□□□□ -0.81
CCDC7-208ENST00000537047 CNTNAP4Q9C0A0 1308 aa10□□□□□ -0.81
CCDC7-208ENST00000537047 FAM168AQ92567 244 aa9.99□□□□□ -0.81
CCDC7-208ENST00000537047 RNF19AQ9NV58 838 aa9.99□□□□□ -0.81
CCDC7-208ENST00000537047 SAMM50Q9Y512 469 aa9.99□□□□□ -0.81
CCDC7-208ENST00000537047 PRAMEF27A3QJZ7 478 aa9.98□□□□□ -0.81
CCDC7-208ENST00000537047 FANCGO15287 622 aa9.98□□□□□ -0.81
CCDC7-208ENST00000537047 ARMCX6Q7L4S7 300 aa9.98□□□□□ -0.81
CCDC7-208ENST00000537047 ELMO3Q96BJ8 720 aa9.98□□□□□ -0.81
CCDC7-208ENST00000537047 LRRC14Q15048 493 aa9.97□□□□□ -0.81
CCDC7-208ENST00000537047 ANGEL2Q5VTE6 544 aaKnown RBP9.97□□□□□ -0.81
CCDC7-208ENST00000537047 CDC37L1Q7L3B6 337 aa9.97□□□□□ -0.81
CCDC7-208ENST00000537047 PLPPR2Q96GM1 343 aa9.97□□□□□ -0.81
CCDC7-208ENST00000537047 KRTAP4-7Q9BYR0 210 aa9.97□□□□□ -0.81
CCDC7-208ENST00000537047 GTF2IRD1Q9UHL9 959 aa9.97□□□□□ -0.81
CCDC7-208ENST00000537047 PRR33A8MZF0 331 aa9.96□□□□□ -0.82
CCDC7-208ENST00000537047 IGF2BP3O00425 579 aaKnown RBP eCLIP9.96□□□□□ -0.82
CCDC7-208ENST00000537047 SLITRK5O94991 958 aa9.96□□□□□ -0.82
CCDC7-208ENST00000537047 ZNF124Q15973 351 aa9.96□□□□□ -0.82
CCDC7-208ENST00000537047 NKG7Q16617 165 aa9.96□□□□□ -0.82
CCDC7-208ENST00000537047 GAL3ST3Q96A11 431 aa9.96□□□□□ -0.82
CCDC7-208ENST00000537047 CYP8B1Q9UNU6 501 aa9.96□□□□□ -0.82
CCDC7-208ENST00000537047 SPG7Q9UQ90 795 aa9.96□□□□□ -0.82
CCDC7-208ENST00000537047 GIPC1O14908 333 aa9.95□□□□□ -0.82
CCDC7-208ENST00000537047 ATP2B2Q01814 1243 aa9.95□□□□□ -0.82
CCDC7-208ENST00000537047 IKZF1Q13422 519 aa9.95□□□□□ -0.82
CCDC7-208ENST00000537047 ERICH6Q7L0X2 663 aa9.95□□□□□ -0.82
CCDC7-208ENST00000537047 ANKRD24Q8TF21 1146 aa9.95□□□□□ -0.82
CCDC7-208ENST00000537047 FAM8A1Q9UBU6 413 aa9.95□□□□□ -0.82
CCDC7-208ENST00000537047 SNX11Q9Y5W9 270 aa9.95□□□□□ -0.82
CCDC7-208ENST00000537047 LDHBP07195 334 aaKnown RBP9.94□□□□□ -0.82
CCDC7-208ENST00000537047 SLBPQ14493 270 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCDC7-208ENST00000537047 SLC23A3Q6PIS1 610 aa9.94□□□□□ -0.82
CCDC7-208ENST00000537047 CYFIP1Q7L576 1253 aa9.94□□□□□ -0.82
CCDC7-208ENST00000537047 TTF2Q9UNY4 1162 aaKnown RBP9.94□□□□□ -0.82
CCDC7-208ENST00000537047 ZP2Q05996 745 aa9.93□□□□□ -0.82
CCDC7-208ENST00000537047 RIN3Q8TB24 985 aa9.93□□□□□ -0.82
CCDC7-208ENST00000537047 TMEM40Q8WWA1 233 aa9.93□□□□□ -0.82
CCDC7-208ENST00000537047 PRDM5Q9NQX1 630 aaPredicted RBP9.93□□□□□ -0.82
CCDC7-208ENST00000537047 PITPNM2Q9BZ72 1349 aa9.92□□□□□ -0.82
CCDC7-208ENST00000537047 FARP2O94887 1054 aaPredicted RBP9.92□□□□□ -0.82
CCDC7-208ENST00000537047 TTBK2Q6IQ55 1244 aa9.92□□□□□ -0.82
CCDC7-208ENST00000537047 ZNF507Q8TCN5 953 aa9.92□□□□□ -0.82
CCDC7-208ENST00000537047 ASB11Q8WXH4 323 aa9.92□□□□□ -0.82
CCDC7-208ENST00000537047 PCDHB5Q9Y5E4 795 aa9.92□□□□□ -0.82
CCDC7-208ENST00000537047 GNAT3A8MTJ3 354 aa9.91□□□□□ -0.82
CCDC7-208ENST00000537047 LRIG2O94898 1065 aa9.91□□□□□ -0.82
CCDC7-208ENST00000537047 KCNA1Q09470 495 aa9.91□□□□□ -0.82
CCDC7-208ENST00000537047 WIPI1Q5MNZ9 446 aaPredicted RBP9.91□□□□□ -0.82
CCDC7-208ENST00000537047 SEPT6Q14141 434 aa9.9□□□□□ -0.82
CCDC7-208ENST00000537047 SV2BQ7L1I2 683 aa9.9□□□□□ -0.82
CCDC7-208ENST00000537047 HSPA12BQ96MM6 686 aa9.9□□□□□ -0.82
CCDC7-208ENST00000537047 MIPEPQ99797 713 aa9.9□□□□□ -0.82
CCDC7-208ENST00000537047 WNT10AQ9GZT5 417 aa9.9□□□□□ -0.82
CCDC7-208ENST00000537047 ATP13A1Q9HD20 1204 aa9.9□□□□□ -0.82
CCDC7-208ENST00000537047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC7-208ENST00000537047 CDKAL1Q5VV42 579 aa9.89□□□□□ -0.83
CCDC7-208ENST00000537047 FYB2Q5VWT5 728 aa9.89□□□□□ -0.83
CCDC7-208ENST00000537047 SCARA3Q6AZY7 606 aa9.89□□□□□ -0.83
CCDC7-208ENST00000537047 HDXQ7Z353 690 aa9.89□□□□□ -0.83
CCDC7-208ENST00000537047 KCT2Q8NC54 265 aa9.89□□□□□ -0.83
CCDC7-208ENST00000537047 FLAD1Q8NFF5 587 aa9.89□□□□□ -0.83
CCDC7-208ENST00000537047 XAGE3Q8WTP9 111 aa9.89□□□□□ -0.83
CCDC7-208ENST00000537047 FOXQ1Q9C009 403 aa9.89□□□□□ -0.83
CCDC7-208ENST00000537047 TPX2Q9ULW0 747 aaKnown RBP9.89□□□□□ -0.83
CCDC7-208ENST00000537047 MAPK8IP1Q9UQF2 711 aa9.89□□□□□ -0.83
CCDC7-208ENST00000537047 ETF1P62495 437 aaKnown RBP9.88□□□□□ -0.83
CCDC7-208ENST00000537047 FGD1P98174 961 aa9.88□□□□□ -0.83
CCDC7-208ENST00000537047 MAP3K11Q16584 847 aa9.88□□□□□ -0.83
CCDC7-208ENST00000537047 SEMA3GQ9NS98 782 aa9.88□□□□□ -0.83
CCDC7-208ENST00000537047 CTNND2Q9UQB3 1225 aa9.88□□□□□ -0.83
CCDC7-208ENST00000537047 ZNF503-AS2A6NEH8 195 aa9.87□□□□□ -0.83
CCDC7-208ENST00000537047 DBX1A6NMT0 343 aa9.87□□□□□ -0.83
CCDC7-208ENST00000537047 GNA15P30679 374 aa9.87□□□□□ -0.83
CCDC7-208ENST00000537047 CLCN7P51798 805 aa9.87□□□□□ -0.83
CCDC7-208ENST00000537047 CARS2Q9HA77 564 aaKnown RBP9.87□□□□□ -0.83
CCDC7-208ENST00000537047 EIF4BP23588 611 aaKnown RBP9.86□□□□□ -0.83
CCDC7-208ENST00000537047 GRK4P32298 578 aa9.86□□□□□ -0.83
CCDC7-208ENST00000537047 MESP2Q0VG99 397 aa9.86□□□□□ -0.83
CCDC7-208ENST00000537047 CCDC85BQ15834 202 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms