RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 KCNH4Q9UQ05 1017 aa17.33■□□□□ 0.36
UBE3B-206ENST00000536398 ZHX2Q9Y6X8 837 aa17.33■□□□□ 0.36
UBE3B-206ENST00000536398 CTNND1O60716 968 aaKnown RBP17.32■□□□□ 0.36
UBE3B-206ENST00000536398 CAP1Q01518 475 aa17.32■□□□□ 0.36
UBE3B-206ENST00000536398 CTU1Q7Z7A3 348 aaKnown RBP17.32■□□□□ 0.36
UBE3B-206ENST00000536398 DNAJC18Q9H819 358 aa17.32■□□□□ 0.36
UBE3B-206ENST00000536398 PI4KBQ9UBF8 816 aa17.32■□□□□ 0.36
UBE3B-206ENST00000536398 COL2A1P02458 1487 aaPredicted RBP17.31■□□□□ 0.36
UBE3B-206ENST00000536398 MAGEB6P1A0A0J9YX57 407 aa17.31■□□□□ 0.36
UBE3B-206ENST00000536398 USP5P45974 858 aa17.31■□□□□ 0.36
UBE3B-206ENST00000536398 JAG1P78504 1218 aa17.31■□□□□ 0.36
UBE3B-206ENST00000536398 TAF1CQ15572 869 aaPredicted RBP17.31■□□□□ 0.36
UBE3B-206ENST00000536398 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
UBE3B-206ENST00000536398 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
UBE3B-206ENST00000536398 ECHDC1Q9NTX5 307 aa17.31■□□□□ 0.36
UBE3B-206ENST00000536398 AFG3L2Q9Y4W6 797 aa17.31■□□□□ 0.36
UBE3B-206ENST00000536398 CCDC85CA6NKD9 419 aa17.3■□□□□ 0.36
UBE3B-206ENST00000536398 SHROOM1Q2M3G4 852 aaPredicted RBP17.3■□□□□ 0.36
UBE3B-206ENST00000536398 LCORLQ8N3X6 602 aa17.3■□□□□ 0.36
UBE3B-206ENST00000536398 CDK5RAP2Q96SN8 1893 aa17.29■□□□□ 0.36
UBE3B-206ENST00000536398 ADD2P35612 726 aa17.29■□□□□ 0.36
UBE3B-206ENST00000536398 CAP2P40123 477 aa17.29■□□□□ 0.36
UBE3B-206ENST00000536398 EVX2Q03828 476 aa17.29■□□□□ 0.36
UBE3B-206ENST00000536398 GPAT2Q6NUI2 795 aa17.29■□□□□ 0.36
UBE3B-206ENST00000536398 METTL16Q86W50 562 aaKnown RBP17.29■□□□□ 0.36
UBE3B-206ENST00000536398 EXOC6Q8TAG9 804 aa17.29■□□□□ 0.36
UBE3B-206ENST00000536398 ZFYVE28Q9HCC9 887 aa17.29■□□□□ 0.36
UBE3B-206ENST00000536398 HERC5Q9UII4 1024 aaKnown RBP17.29■□□□□ 0.36
UBE3B-206ENST00000536398 SUPT16HQ9Y5B9 1047 aaKnown RBP17.29■□□□□ 0.36
UBE3B-206ENST00000536398 SIPA1L1O43166 1804 aa17.28■□□□□ 0.36
UBE3B-206ENST00000536398 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
UBE3B-206ENST00000536398 PDHXO00330 501 aa17.28■□□□□ 0.36
UBE3B-206ENST00000536398 CXCL11O14625 94 aa17.28■□□□□ 0.36
UBE3B-206ENST00000536398 TMED8Q6PL24 325 aaPredicted RBP17.28■□□□□ 0.36
UBE3B-206ENST00000536398 FOXP4Q8IVH2 680 aaPredicted RBP17.28■□□□□ 0.36
UBE3B-206ENST00000536398 CD99L2Q8TCZ2 262 aa17.28■□□□□ 0.36
UBE3B-206ENST00000536398 ARMT1Q9H993 441 aa17.28■□□□□ 0.36
UBE3B-206ENST00000536398 A0A0G2JLL6 359 aaPredicted RBP17.27■□□□□ 0.36
UBE3B-206ENST00000536398 PRKAB2O43741 272 aa17.27■□□□□ 0.36
UBE3B-206ENST00000536398 PLCD1P51178 756 aa17.27■□□□□ 0.36
UBE3B-206ENST00000536398 SP3Q02447 781 aa17.27■□□□□ 0.36
UBE3B-206ENST00000536398 PRRT2Q7Z6L0 340 aaPredicted RBP17.27■□□□□ 0.36
UBE3B-206ENST00000536398 ANKRD23Q86SG2 305 aa17.27■□□□□ 0.36
UBE3B-206ENST00000536398 CRACR2BQ8N4Y2 399 aaPredicted RBP17.27■□□□□ 0.36
UBE3B-206ENST00000536398 SDR42E1Q8WUS8 393 aa17.27■□□□□ 0.36
UBE3B-206ENST00000536398 FOCADQ5VW36 1801 aa17.26■□□□□ 0.35
UBE3B-206ENST00000536398 MBD4O95243 580 aa17.26■□□□□ 0.35
UBE3B-206ENST00000536398 GDF11O95390 407 aa17.26■□□□□ 0.35
UBE3B-206ENST00000536398 SPP2Q13103 211 aa17.26■□□□□ 0.35
UBE3B-206ENST00000536398 HDAC1Q13547 482 aaPredicted RBP17.26■□□□□ 0.35
UBE3B-206ENST00000536398 ANKRD45Q5TZF3 282 aa17.26■□□□□ 0.35
UBE3B-206ENST00000536398 GADL1Q6ZQY3 521 aa17.26■□□□□ 0.35
UBE3B-206ENST00000536398 CERS3Q8IU89 383 aa17.26■□□□□ 0.35
UBE3B-206ENST00000536398 TRIM17Q9Y577 477 aa17.26■□□□□ 0.35
UBE3B-206ENST00000536398 DOCK1Q14185 1865 aa17.25■□□□□ 0.35
UBE3B-206ENST00000536398 TLR2O60603 784 aa17.25■□□□□ 0.35
UBE3B-206ENST00000536398 ECM2O94769 699 aaPredicted RBP17.25■□□□□ 0.35
UBE3B-206ENST00000536398 HLA-DOAP06340 250 aa17.25■□□□□ 0.35
UBE3B-206ENST00000536398 CYP2C8P10632 490 aa17.25■□□□□ 0.35
UBE3B-206ENST00000536398 CYP2D6P10635 497 aa17.25■□□□□ 0.35
UBE3B-206ENST00000536398 OTOP1Q7RTM1 612 aa17.25■□□□□ 0.35
UBE3B-206ENST00000536398 TRIM34Q9BYJ4 488 aa17.25■□□□□ 0.35
UBE3B-206ENST00000536398 CRNKL1Q9BZJ0 848 aaKnown RBP17.25■□□□□ 0.35
UBE3B-206ENST00000536398 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.25■□□□□ 0.35
UBE3B-206ENST00000536398 ZCCHC17Q9NP64 241 aaKnown RBP17.25■□□□□ 0.35
UBE3B-206ENST00000536398 CPA4Q9UI42 421 aa17.25■□□□□ 0.35
UBE3B-206ENST00000536398 PHIPQ8WWQ0 1821 aa17.24■□□□□ 0.35
UBE3B-206ENST00000536398 USP17L5A8MUK1 530 aa17.24■□□□□ 0.35
UBE3B-206ENST00000536398 UBE3CQ15386 1083 aa17.24■□□□□ 0.35
UBE3B-206ENST00000536398 POTEDQ86YR6 584 aa17.24■□□□□ 0.35
UBE3B-206ENST00000536398 PI4K2BQ8TCG2 481 aa17.24■□□□□ 0.35
UBE3B-206ENST00000536398 ERO1AQ96HE7 468 aa17.24■□□□□ 0.35
UBE3B-206ENST00000536398 GPATCH3Q96I76 525 aa17.24■□□□□ 0.35
UBE3B-206ENST00000536398 ARHGAP39Q9C0H5 1083 aa17.24■□□□□ 0.35
UBE3B-206ENST00000536398 PUS7LQ9H0K6 701 aaKnown RBP17.24■□□□□ 0.35
UBE3B-206ENST00000536398 DCP1AQ9NPI6 582 aaPredicted RBP17.24■□□□□ 0.35
UBE3B-206ENST00000536398 HPS5Q9UPZ3 1129 aa17.24■□□□□ 0.35
UBE3B-206ENST00000536398 SMIM22K7EJ46 135 aa17.23■□□□□ 0.35
UBE3B-206ENST00000536398 IGHDP01880 384 aa17.23■□□□□ 0.35
UBE3B-206ENST00000536398 POLR3DP05423 398 aaPredicted RBP17.23■□□□□ 0.35
UBE3B-206ENST00000536398 PKN2Q16513 984 aaKnown RBP17.23■□□□□ 0.35
UBE3B-206ENST00000536398 TREML2Q5T2D2 321 aa17.23■□□□□ 0.35
UBE3B-206ENST00000536398 TATDN1Q6P1N9 297 aa17.23■□□□□ 0.35
UBE3B-206ENST00000536398 C17orf99Q6UX52 265 aa17.23■□□□□ 0.35
UBE3B-206ENST00000536398 FASTKD5Q7L8L6 764 aaKnown RBP17.23■□□□□ 0.35
UBE3B-206ENST00000536398 ZNF280CQ8ND82 737 aa17.23■□□□□ 0.35
UBE3B-206ENST00000536398 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
UBE3B-206ENST00000536398 SERPINB13Q9UIV8 391 aa17.23■□□□□ 0.35
UBE3B-206ENST00000536398 ADGRA2Q96PE1 1338 aa17.22■□□□□ 0.35
UBE3B-206ENST00000536398 SALL3Q9BXA9 1300 aa17.22■□□□□ 0.35
UBE3B-206ENST00000536398 HMGCS2P54868 508 aa17.22■□□□□ 0.35
UBE3B-206ENST00000536398 FBXO46Q6PJ61 603 aaPredicted RBP17.22■□□□□ 0.35
UBE3B-206ENST00000536398 TTC6Q86TZ1 520 aa17.22■□□□□ 0.35
UBE3B-206ENST00000536398 KBTBD3Q8NAB2 608 aa17.22■□□□□ 0.35
UBE3B-206ENST00000536398 GCC1Q96CN9 775 aa17.22■□□□□ 0.35
UBE3B-206ENST00000536398 EHD4Q9H223 541 aa17.22■□□□□ 0.35
UBE3B-206ENST00000536398 EFCC1Q9HA90 598 aa17.22■□□□□ 0.35
UBE3B-206ENST00000536398 ZBTB21Q9ULJ3 1066 aa17.22■□□□□ 0.35
UBE3B-206ENST00000536398 TTC41PQ6P2S7 1318 aa17.21■□□□□ 0.35
UBE3B-206ENST00000536398 MYH1P12882 1939 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms