RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 FGRP09769 529 aa13.65□□□□□ -0.22
CDCA3-206ENST00000536241 CASTP20810 708 aaKnown RBP13.65□□□□□ -0.22
CDCA3-206ENST00000536241 PSMA5P28066 241 aa13.65□□□□□ -0.22
CDCA3-206ENST00000536241 CDK8P49336 464 aa13.65□□□□□ -0.22
CDCA3-206ENST00000536241 RRP12Q5JTH9 1297 aaKnown RBP13.65□□□□□ -0.22
CDCA3-206ENST00000536241 PRAMEF18Q5VWM3 479 aa13.65□□□□□ -0.22
CDCA3-206ENST00000536241 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
CDCA3-206ENST00000536241 FOXP4Q8IVH2 680 aaPredicted RBP13.65□□□□□ -0.22
CDCA3-206ENST00000536241 SLC44A5Q8NCS7 719 aa13.65□□□□□ -0.22
CDCA3-206ENST00000536241 NCOA7Q8NI08 942 aa13.65□□□□□ -0.22
CDCA3-206ENST00000536241 DCPSQ96C86 337 aaKnown RBP13.65□□□□□ -0.22
CDCA3-206ENST00000536241 UPF3BQ9BZI7 483 aaKnown RBP13.65□□□□□ -0.22
CDCA3-206ENST00000536241 ZSWIM6Q9HCJ5 1215 aa13.65□□□□□ -0.22
CDCA3-206ENST00000536241 PGAP2Q9UHJ9 254 aa13.65□□□□□ -0.22
CDCA3-206ENST00000536241 B4E1Z4 1266 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 NEK4P51957 841 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 PDE4BQ07343 736 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 TRDNQ13061 729 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 APOBEC3FQ8IUX4 373 aaKnown RBP13.64□□□□□ -0.23
CDCA3-206ENST00000536241 CDAN1Q8IWY9 1227 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 CSRNP1Q96S65 589 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 TM6SF1Q9BZW5 370 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 RNF41Q9H4P4 317 aaPredicted RBP13.64□□□□□ -0.23
CDCA3-206ENST00000536241 MKNK2Q9HBH9 465 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 NMRK2Q9NPI5 230 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 SERPINB13Q9UIV8 391 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 SCN4AP35499 1836 aa13.64□□□□□ -0.23
CDCA3-206ENST00000536241 WDR90Q96KV7 1748 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 NEDD4P46934 1319 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 GABPAQ06546 454 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 BLOC1S2Q6QNY1 142 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 DLK2Q6UY11 383 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 RUFY3Q7L099 469 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 CHST3Q7LGC8 479 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 RALYLQ86SE5 291 aaKnown RBP13.63□□□□□ -0.23
CDCA3-206ENST00000536241 CRACR2BQ8N4Y2 399 aaPredicted RBP13.63□□□□□ -0.23
CDCA3-206ENST00000536241 ZC3H15Q8WU90 426 aaKnown RBP13.63□□□□□ -0.23
CDCA3-206ENST00000536241 TEPSINQ96N21 525 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 KRT23Q9C075 422 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 ZSWIM5Q9P217 1185 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDCA3-206ENST00000536241 NAV1Q8NEY1 1877 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 ATRNL1Q5VV63 1379 aa13.63□□□□□ -0.23
CDCA3-206ENST00000536241 FAM196BA6NMK8 535 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 KDM4AO75164 1064 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 POTEJP0CG39 1038 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 EXOSC10Q01780 885 aaKnown RBP13.62□□□□□ -0.23
CDCA3-206ENST00000536241 RABEP1Q15276 862 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 NBPF12Q5TAG4 269 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-206ENST00000536241 CYB5R4Q7L1T6 521 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 MIGA2Q7L4E1 593 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 DHX32Q7L7V1 743 aaKnown RBP13.62□□□□□ -0.23
CDCA3-206ENST00000536241 ZNF444Q8N0Y2 327 aaPredicted RBP13.62□□□□□ -0.23
CDCA3-206ENST00000536241 TCEANC2Q96MN5 208 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 EHD4Q9H223 541 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 CNNM2Q9H8M5 875 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 CYP46A1Q9Y6A2 500 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 PITPNM2Q9BZ72 1349 aa13.62□□□□□ -0.23
CDCA3-206ENST00000536241 ORC4O43929 436 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 RANBP6O60518 1105 aaKnown RBP13.61□□□□□ -0.23
CDCA3-206ENST00000536241 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
CDCA3-206ENST00000536241 PCP11498 1178 aaKnown RBP13.61□□□□□ -0.23
CDCA3-206ENST00000536241 RPS6KB1P23443 525 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 FAM47AQ5JRC9 791 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 USP48Q86UV5 1035 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 METTL16Q86W50 562 aaKnown RBP13.61□□□□□ -0.23
CDCA3-206ENST00000536241 SULF1Q8IWU6 871 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 MB21D2Q8IYB1 491 aaPredicted RBP13.61□□□□□ -0.23
CDCA3-206ENST00000536241 DNAJC18Q9H819 358 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDCA3-206ENST00000536241 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 PDRG1Q9NUG6 133 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 SWAP70Q9UH65 585 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 ROBO3Q96MS0 1386 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 RASA1P20936 1047 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 MCM5P33992 734 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 ANTXR2P58335 489 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 TFAP4Q01664 338 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 KRT26Q7Z3Y9 468 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 ESR2Q92731 530 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
CDCA3-206ENST00000536241 COL2A1P02458 1487 aaPredicted RBP13.6□□□□□ -0.23
CDCA3-206ENST00000536241 ADM5C9JUS6 153 aa13.6□□□□□ -0.23
CDCA3-206ENST00000536241 PRC1O43663 620 aa13.6□□□□□ -0.23
CDCA3-206ENST00000536241 TBC1D12O60347 775 aa13.6□□□□□ -0.23
CDCA3-206ENST00000536241 SHMT1P34896 483 aa13.6□□□□□ -0.23
CDCA3-206ENST00000536241 MAP3K10Q02779 954 aa13.6□□□□□ -0.23
CDCA3-206ENST00000536241 TATDN1Q6P1N9 297 aa13.6□□□□□ -0.23
CDCA3-206ENST00000536241 ZKSCAN3Q9BRR0 538 aa13.6□□□□□ -0.23
CDCA3-206ENST00000536241 LARP6Q9BRS8 491 aaKnown RBP13.6□□□□□ -0.23
CDCA3-206ENST00000536241 GLIS2Q9BZE0 524 aaPredicted RBP13.6□□□□□ -0.23
CDCA3-206ENST00000536241 HERC5Q9UII4 1024 aaKnown RBP13.6□□□□□ -0.23
CDCA3-206ENST00000536241 DDX60LQ5H9U9 1706 aaKnown RBP13.6□□□□□ -0.23
CDCA3-206ENST00000536241 LAMA4Q16363 1823 aa13.59□□□□□ -0.23
CDCA3-206ENST00000536241 TSPY2A6NKD2 308 aa13.59□□□□□ -0.23
CDCA3-206ENST00000536241 CERKLQ49MI3 558 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms