RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 STX1AQ16623 288 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 MMS22LQ6ZRQ5 1243 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 RALYLQ86SE5 291 aaKnown RBP15.99■□□□□ 0.15
LIG1-203ENST00000536218 SPATA5Q8NB90 893 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 BCCIPQ9P287 314 aaKnown RBP eCLIP15.99■□□□□ 0.15
LIG1-203ENST00000536218 ZNF652Q9Y2D9 606 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 COL22A1Q8NFW1 1626 aaPredicted RBP15.99■□□□□ 0.15
LIG1-203ENST00000536218 TTF1Q15361 905 aaPredicted RBP15.99■□□□□ 0.15
LIG1-203ENST00000536218 MAGEB6Q8N7X4 407 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 IQUBQ8NA54 791 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 INCENPQ9NQS7 918 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 SRP68Q9UHB9 627 aaKnown RBP15.99■□□□□ 0.15
LIG1-203ENST00000536218 PTPDC1A2A3K4 754 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 PRC1O43663 620 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 PFKFB2O60825 505 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 UQCRFS1P1P0C7P4 283 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 LONRF2Q1L5Z9 754 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 ISM2Q6H9L7 571 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 AIDAQ96BJ3 306 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 PGBD1Q96JS3 809 aa15.99■□□□□ 0.15
LIG1-203ENST00000536218 FGFR2P21802 821 aa15.98■□□□□ 0.15
LIG1-203ENST00000536218 PDIA3P30101 505 aaKnown RBP15.98■□□□□ 0.15
LIG1-203ENST00000536218 CHRNDQ07001 517 aa15.98■□□□□ 0.15
LIG1-203ENST00000536218 ARMCX5Q6P1M9 558 aa15.98■□□□□ 0.15
LIG1-203ENST00000536218 USP21Q9UK80 565 aa15.98■□□□□ 0.15
LIG1-203ENST00000536218 CAVIN2O95810 425 aa15.98■□□□□ 0.15
LIG1-203ENST00000536218 CORO7P57737 925 aa15.98■□□□□ 0.15
LIG1-203ENST00000536218 ZRSR1Q15695 479 aaKnown RBP15.98■□□□□ 0.15
LIG1-203ENST00000536218 RBM43Q6ZSC3 357 aaKnown RBP15.98■□□□□ 0.15
LIG1-203ENST00000536218 NSUN7Q8NE18 718 aaKnown RBP15.98■□□□□ 0.15
LIG1-203ENST00000536218 PSDA5PKW4 1024 aaPredicted RBP15.97■□□□□ 0.15
LIG1-203ENST00000536218 CTDNEP1O95476 244 aa15.97■□□□□ 0.15
LIG1-203ENST00000536218 MYH14Q7Z406 1995 aaKnown RBP15.97■□□□□ 0.15
LIG1-203ENST00000536218 FAN1Q9Y2M0 1017 aa15.97■□□□□ 0.15
LIG1-203ENST00000536218 N4BP1O75113 896 aaKnown RBP15.97■□□□□ 0.15
LIG1-203ENST00000536218 GPR161Q8N6U8 529 aaKnown RBP15.97■□□□□ 0.15
LIG1-203ENST00000536218 SRRTQ9BXP5 876 aaKnown RBP15.97■□□□□ 0.15
LIG1-203ENST00000536218 ABCF2Q9UG63 623 aa15.97■□□□□ 0.15
LIG1-203ENST00000536218 IFNKQ9P0W0 207 aa15.97■□□□□ 0.15
LIG1-203ENST00000536218 KLF18A0A0U1RQI7 1052 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 ARID4AP29374 1257 aaPredicted RBP15.96■□□□□ 0.15
LIG1-203ENST00000536218 TBC1D9BQ66K14 1250 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 MIGA1Q8NAN2 632 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 NCOA7Q8NI08 942 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 NKX2-3Q8TAU0 364 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 ARMT1Q9H993 441 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 GNPATO15228 680 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 RXRAP19793 462 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 GYG1P46976 350 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 TRDNQ13061 729 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 OTUD7BQ6GQQ9 843 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 DHX40Q8IX18 779 aaKnown RBP15.96■□□□□ 0.15
LIG1-203ENST00000536218 CCDC102AQ96A19 550 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 XPO4Q9C0E2 1151 aaKnown RBP15.96■□□□□ 0.15
LIG1-203ENST00000536218 LRP2BPQ9P2M1 347 aa15.96■□□□□ 0.15
LIG1-203ENST00000536218 MBD4O95243 580 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 PPP2R3AQ06190 1150 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 MAP3K12Q12852 859 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 VPS72Q15906 364 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 NBPF11Q86T75 865 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 CEP57L1Q8IYX8 460 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 CCDC150Q8NCX0 1101 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 ZSCAN16Q9H4T2 348 aaPredicted RBP15.95■□□□□ 0.14
LIG1-203ENST00000536218 PHLPP2Q6ZVD8 1323 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 GOLGA8BA8MQT2 603 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 PRKAB2O43741 272 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 UBE3CQ15386 1083 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 WWC2Q6AWC2 1192 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 TBC1D10CQ8IV04 446 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 ANKRD18AQ8IVF6 992 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 SUGP1Q8IWZ8 645 aaKnown RBP15.95■□□□□ 0.14
LIG1-203ENST00000536218 FTOQ9C0B1 505 aaKnown RBP eCLIP15.95■□□□□ 0.14
LIG1-203ENST00000536218 KCND1Q9NSA2 647 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 PARP3Q9Y6F1 533 aa15.95■□□□□ 0.14
LIG1-203ENST00000536218 B4E1Z4 1266 aa15.94■□□□□ 0.14
LIG1-203ENST00000536218 TICAM2Q86XR7 235 aa15.94■□□□□ 0.14
LIG1-203ENST00000536218 ZNF512BQ96KM6 892 aaPredicted RBP15.94■□□□□ 0.14
LIG1-203ENST00000536218 CDC5LQ99459 802 aaKnown RBP15.94■□□□□ 0.14
LIG1-203ENST00000536218 FANCGO15287 622 aa15.94■□□□□ 0.14
LIG1-203ENST00000536218 LIG3P49916 1009 aa15.94■□□□□ 0.14
LIG1-203ENST00000536218 ANTXR2P58335 489 aa15.94■□□□□ 0.14
LIG1-203ENST00000536218 GNG11P61952 73 aa15.94■□□□□ 0.14
LIG1-203ENST00000536218 SATB1Q01826 763 aa15.94■□□□□ 0.14
LIG1-203ENST00000536218 MEX3CQ5U5Q3 659 aaKnown RBP15.94■□□□□ 0.14
LIG1-203ENST00000536218 TADA2BQ86TJ2 420 aa15.94■□□□□ 0.14
LIG1-203ENST00000536218 OSBPL5Q9H0X9 879 aaPredicted RBP15.94■□□□□ 0.14
LIG1-203ENST00000536218 ANO10Q9NW15 660 aa15.94■□□□□ 0.14
LIG1-203ENST00000536218 CTDSPL2Q05D32 466 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 RRP12Q5JTH9 1297 aaKnown RBP15.93■□□□□ 0.14
LIG1-203ENST00000536218 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
LIG1-203ENST00000536218 VPS37DQ86XT2 251 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 MB21D2Q8IYB1 491 aaPredicted RBP15.93■□□□□ 0.14
LIG1-203ENST00000536218 SMARCC2Q8TAQ2 1214 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 CELF1Q92879 486 aaKnown RBP15.93■□□□□ 0.14
LIG1-203ENST00000536218 STRBPQ96SI9 672 aaKnown RBP15.93■□□□□ 0.14
LIG1-203ENST00000536218 GJB4Q9NTQ9 266 aa15.93■□□□□ 0.14
LIG1-203ENST00000536218 CCNL1Q9UK58 526 aaPredicted RBP15.93■□□□□ 0.14
LIG1-203ENST00000536218 GSCP56915 257 aaPredicted RBP15.93■□□□□ 0.14
LIG1-203ENST00000536218 AGXT2Q9BYV1 514 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms