RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 SMC5Q8IY18 1101 aa15.39■□□□□ 0.05
VPS37C-203ENST00000536000 CRACR2BQ8N4Y2 399 aaPredicted RBP15.39■□□□□ 0.05
VPS37C-203ENST00000536000 TRIM34Q9BYJ4 488 aa15.39■□□□□ 0.05
VPS37C-203ENST00000536000 SNAPC2Q13487 334 aa15.38■□□□□ 0.05
VPS37C-203ENST00000536000 SLFNL1Q499Z3 407 aa15.38■□□□□ 0.05
VPS37C-203ENST00000536000 TTC6Q86TZ1 520 aa15.38■□□□□ 0.05
VPS37C-203ENST00000536000 TNS4Q8IZW8 715 aa15.38■□□□□ 0.05
VPS37C-203ENST00000536000 KBTBD3Q8NAB2 608 aa15.38■□□□□ 0.05
VPS37C-203ENST00000536000 PTPN18Q99952 460 aa15.38■□□□□ 0.05
VPS37C-203ENST00000536000 ZHX2Q9Y6X8 837 aa15.38■□□□□ 0.05
VPS37C-203ENST00000536000 MAST2Q6P0Q8 1798 aa15.38■□□□□ 0.05
VPS37C-203ENST00000536000 COL2A1P02458 1487 aaPredicted RBP15.38■□□□□ 0.05
VPS37C-203ENST00000536000 CASP8AP2Q9UKL3 1982 aa15.38■□□□□ 0.05
VPS37C-203ENST00000536000 DOCK2Q92608 1830 aa15.38■□□□□ 0.05
VPS37C-203ENST00000536000 IGF2BP3O00425 579 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS37C-203ENST00000536000 POLR3DP05423 398 aaPredicted RBP15.37■□□□□ 0.05
VPS37C-203ENST00000536000 PTPRAP18433 802 aa15.37■□□□□ 0.05
VPS37C-203ENST00000536000 LRRFIP1Q32MZ4 808 aaKnown RBP15.37■□□□□ 0.05
VPS37C-203ENST00000536000 PI4K2BQ8TCG2 481 aa15.37■□□□□ 0.05
VPS37C-203ENST00000536000 BRI3BPQ8WY22 251 aa15.37■□□□□ 0.05
VPS37C-203ENST00000536000 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
VPS37C-203ENST00000536000 ARMT1Q9H993 441 aa15.37■□□□□ 0.05
VPS37C-203ENST00000536000 OTOFQ9HC10 1997 aa15.36■□□□□ 0.05
VPS37C-203ENST00000536000 CXCL11O14625 94 aa15.36■□□□□ 0.05
VPS37C-203ENST00000536000 MBD4O95243 580 aa15.36■□□□□ 0.05
VPS37C-203ENST00000536000 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
VPS37C-203ENST00000536000 CAP2P40123 477 aa15.36■□□□□ 0.05
VPS37C-203ENST00000536000 SLC4A8Q2Y0W8 1093 aa15.36■□□□□ 0.05
VPS37C-203ENST00000536000 METTL16Q86W50 562 aaKnown RBP15.36■□□□□ 0.05
VPS37C-203ENST00000536000 LCORLQ8N3X6 602 aa15.36■□□□□ 0.05
VPS37C-203ENST00000536000 CFHR5Q9BXR6 569 aa15.36■□□□□ 0.05
VPS37C-203ENST00000536000 STAP2Q9UGK3 403 aa15.36■□□□□ 0.05
VPS37C-203ENST00000536000 KCNH4Q9UQ05 1017 aa15.36■□□□□ 0.05
VPS37C-203ENST00000536000 GPR25O00155 361 aa15.35■□□□□ 0.05
VPS37C-203ENST00000536000 RNF113AO15541 343 aaKnown RBP15.35■□□□□ 0.05
VPS37C-203ENST00000536000 CHGBP05060 677 aa15.35■□□□□ 0.05
VPS37C-203ENST00000536000 PDE1AP54750 535 aa15.35■□□□□ 0.05
VPS37C-203ENST00000536000 CHD1LQ86WJ1 897 aa15.35■□□□□ 0.05
VPS37C-203ENST00000536000 SDR42E1Q8WUS8 393 aa15.35■□□□□ 0.05
VPS37C-203ENST00000536000 PUS7LQ9H0K6 701 aaKnown RBP15.35■□□□□ 0.05
VPS37C-203ENST00000536000 R3HDMLQ9H3Y0 253 aa15.35■□□□□ 0.05
VPS37C-203ENST00000536000 MCM9Q9NXL9 1143 aa15.35■□□□□ 0.05
VPS37C-203ENST00000536000 SALL3Q9BXA9 1300 aa15.35■□□□□ 0.05
VPS37C-203ENST00000536000 PCNTO95613 3336 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 PRKAB2O43741 272 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 NUCB1Q02818 461 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 TAF1CQ15572 869 aaPredicted RBP15.34■□□□□ 0.05
VPS37C-203ENST00000536000 NOM1Q5C9Z4 860 aaKnown RBP15.34■□□□□ 0.05
VPS37C-203ENST00000536000 FAM43AQ8N2R8 423 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 DDRGK1Q96HY6 314 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 FSD1Q9BTV5 496 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 ZFYVE28Q9HCC9 887 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 DCP1AQ9NPI6 582 aaPredicted RBP15.34■□□□□ 0.05
VPS37C-203ENST00000536000 ATP8A2Q9NTI2 1148 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 SERPINB13Q9UIV8 391 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 AFG3L2Q9Y4W6 797 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 SLC4A4Q9Y6R1 1079 aa15.34■□□□□ 0.05
VPS37C-203ENST00000536000 MYH1P12882 1939 aa15.33■□□□□ 0.05
VPS37C-203ENST00000536000 USP17L5A8MUK1 530 aa15.33■□□□□ 0.04
VPS37C-203ENST00000536000 BTBD19C9JJ37 291 aa15.33■□□□□ 0.04
VPS37C-203ENST00000536000 FKTNO75072 461 aa15.33■□□□□ 0.04
VPS37C-203ENST00000536000 PLCD1P51178 756 aa15.33■□□□□ 0.04
VPS37C-203ENST00000536000 RRP1BQ14684 758 aaKnown RBP15.33■□□□□ 0.04
VPS37C-203ENST00000536000 ZNF296Q8WUU4 475 aaPredicted RBP15.33■□□□□ 0.04
VPS37C-203ENST00000536000 APPBP2Q92624 585 aa15.33■□□□□ 0.04
VPS37C-203ENST00000536000 EHD4Q9H223 541 aa15.33■□□□□ 0.04
VPS37C-203ENST00000536000 GINM1Q9NU53 330 aa15.33■□□□□ 0.04
VPS37C-203ENST00000536000 CDK5RAP2Q96SN8 1893 aa15.33■□□□□ 0.04
VPS37C-203ENST00000536000 ASNSP08243 561 aa15.32■□□□□ 0.04
VPS37C-203ENST00000536000 CRHR2Q13324 411 aa15.32■□□□□ 0.04
VPS37C-203ENST00000536000 FASTKD5Q7L8L6 764 aaKnown RBP15.32■□□□□ 0.04
VPS37C-203ENST00000536000 CCDC84Q86UT8 332 aaPredicted RBP15.32■□□□□ 0.04
VPS37C-203ENST00000536000 AMOTL1Q8IY63 956 aa15.32■□□□□ 0.04
VPS37C-203ENST00000536000 OSBP2Q969R2 916 aa15.32■□□□□ 0.04
VPS37C-203ENST00000536000 EVI5LQ96CN4 794 aa15.32■□□□□ 0.04
VPS37C-203ENST00000536000 STRBPQ96SI9 672 aaKnown RBP15.32■□□□□ 0.04
VPS37C-203ENST00000536000 TBC1D2Q9BYX2 928 aa15.32■□□□□ 0.04
VPS37C-203ENST00000536000 DNAJC18Q9H819 358 aa15.32■□□□□ 0.04
VPS37C-203ENST00000536000 AS3MTQ9HBK9 375 aa15.32■□□□□ 0.04
VPS37C-203ENST00000536000 ZCCHC17Q9NP64 241 aaKnown RBP15.32■□□□□ 0.04
VPS37C-203ENST00000536000 TRIM75PA6NK02 468 aa15.31■□□□□ 0.04
VPS37C-203ENST00000536000 GDF11O95390 407 aa15.31■□□□□ 0.04
VPS37C-203ENST00000536000 SPP2Q13103 211 aa15.31■□□□□ 0.04
VPS37C-203ENST00000536000 DGKZQ13574 1117 aa15.31■□□□□ 0.04
VPS37C-203ENST00000536000 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
VPS37C-203ENST00000536000 TATDN1Q6P1N9 297 aa15.31■□□□□ 0.04
VPS37C-203ENST00000536000 ANKRD23Q86SG2 305 aa15.31■□□□□ 0.04
VPS37C-203ENST00000536000 ZNF280CQ8ND82 737 aa15.31■□□□□ 0.04
VPS37C-203ENST00000536000 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.31■□□□□ 0.04
VPS37C-203ENST00000536000 FOCADQ5VW36 1801 aa15.31■□□□□ 0.04
VPS37C-203ENST00000536000 MYH7P12883 1935 aa15.31■□□□□ 0.04
VPS37C-203ENST00000536000 A0A0G2JLL6 359 aaPredicted RBP15.3■□□□□ 0.04
VPS37C-203ENST00000536000 USP17L12C9JPN9 530 aa15.3■□□□□ 0.04
VPS37C-203ENST00000536000 USP17L21D6R901 530 aa15.3■□□□□ 0.04
VPS37C-203ENST00000536000 PDHXO00330 501 aa15.3■□□□□ 0.04
VPS37C-203ENST00000536000 GADL1Q6ZQY3 521 aa15.3■□□□□ 0.04
VPS37C-203ENST00000536000 PRRT2Q7Z6L0 340 aaPredicted RBP15.3■□□□□ 0.04
VPS37C-203ENST00000536000 PLEKHM2Q8IWE5 1019 aa15.3■□□□□ 0.04
VPS37C-203ENST00000536000 CABP5Q9NP86 173 aa15.3■□□□□ 0.04
VPS37C-203ENST00000536000 TRIM6-TRIM34B2RNG4 842 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms