RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
CLSTN3-205ENST00000535452 DPF3Q92784 378 aa16.17■□□□□ 0.18
CLSTN3-205ENST00000535452 RNF208Q9H0X6 261 aa16.17■□□□□ 0.18
CLSTN3-205ENST00000535452 CWC22Q9HCG8 908 aaKnown RBP16.17■□□□□ 0.18
CLSTN3-205ENST00000535452 SNRKQ9NRH2 765 aa16.17■□□□□ 0.18
CLSTN3-205ENST00000535452 USP5P45974 858 aa16.16■□□□□ 0.18
CLSTN3-205ENST00000535452 IRX3P78415 501 aaPredicted RBP16.16■□□□□ 0.18
CLSTN3-205ENST00000535452 MAP3K10Q02779 954 aa16.16■□□□□ 0.18
CLSTN3-205ENST00000535452 SPP2Q13103 211 aa16.16■□□□□ 0.18
CLSTN3-205ENST00000535452 TMED8Q6PL24 325 aaPredicted RBP16.16■□□□□ 0.18
CLSTN3-205ENST00000535452 PI16Q6UXB8 463 aa16.16■□□□□ 0.18
CLSTN3-205ENST00000535452 SSH3Q8TE77 659 aa16.16■□□□□ 0.18
CLSTN3-205ENST00000535452 DDX4Q9NQI0 724 aaKnown RBP16.16■□□□□ 0.18
CLSTN3-205ENST00000535452 GINM1Q9NU53 330 aa16.16■□□□□ 0.18
CLSTN3-205ENST00000535452 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
CLSTN3-205ENST00000535452 HMMRO75330 724 aa16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 RHBDL3P58872 404 aa16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 PRKCZQ05513 592 aa16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 MAP3K12Q12852 859 aa16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 POLA2Q14181 598 aa16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 SH3BP5LQ7L8J4 393 aa16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 FOXP4Q8IVH2 680 aaPredicted RBP16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 ANKRD13CQ8N6S4 541 aa16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 SH3RF3Q8TEJ3 882 aaPredicted RBP16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 TGFBRAP1Q8WUH2 860 aa16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 DBNDD2Q9BQY9 259 aa16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
CLSTN3-205ENST00000535452 RFX7Q2KHR2 1363 aa16.14■□□□□ 0.17
CLSTN3-205ENST00000535452 ADCY3O60266 1144 aa16.14■□□□□ 0.17
CLSTN3-205ENST00000535452 BCRP11274 1271 aa16.14■□□□□ 0.17
CLSTN3-205ENST00000535452 CAP2P40123 477 aa16.14■□□□□ 0.17
CLSTN3-205ENST00000535452 GPAT2Q6NUI2 795 aa16.14■□□□□ 0.17
CLSTN3-205ENST00000535452 ZNF512BQ96KM6 892 aaPredicted RBP16.14■□□□□ 0.17
CLSTN3-205ENST00000535452 RBBP6Q7Z6E9 1792 aaKnown RBP16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 FAM196BA6NMK8 535 aa16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 GJB1P08034 283 aa16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 CCL5P13501 91 aa16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 CYP7A1P22680 504 aa16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 HMGCS2P54868 508 aa16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 TTF1Q15361 905 aaPredicted RBP16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 FAM110CQ1W6H9 321 aa16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 MAPKAPK5Q8IW41 473 aa16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 FEZ1Q99689 392 aa16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 NR2E3Q9Y5X4 410 aa16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 ADGRA2Q96PE1 1338 aa16.13■□□□□ 0.17
CLSTN3-205ENST00000535452 C19orf81C9J6K1 198 aa16.12■□□□□ 0.17
CLSTN3-205ENST00000535452 FLT3LGP49771 235 aa16.12■□□□□ 0.17
CLSTN3-205ENST00000535452 PPP4CP60510 307 aa16.12■□□□□ 0.17
CLSTN3-205ENST00000535452 PDE3AQ14432 1141 aa16.12■□□□□ 0.17
CLSTN3-205ENST00000535452 TTC6Q86TZ1 520 aa16.12■□□□□ 0.17
CLSTN3-205ENST00000535452 PXYLP1Q8TE99 480 aa16.12■□□□□ 0.17
CLSTN3-205ENST00000535452 GTF3C2Q8WUA4 911 aaPredicted RBP16.12■□□□□ 0.17
CLSTN3-205ENST00000535452 TNNQ9UQP3 1299 aa16.12■□□□□ 0.17
CLSTN3-205ENST00000535452 DOCK1Q14185 1865 aa16.12■□□□□ 0.17
CLSTN3-205ENST00000535452 TFRCP02786 760 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-205ENST00000535452 GJA8P48165 433 aa16.11■□□□□ 0.17
CLSTN3-205ENST00000535452 IRF5Q13568 498 aa16.11■□□□□ 0.17
CLSTN3-205ENST00000535452 MOGSQ13724 837 aa16.11■□□□□ 0.17
CLSTN3-205ENST00000535452 AACSQ86V21 672 aa16.11■□□□□ 0.17
CLSTN3-205ENST00000535452 CLASRPQ8N2M8 674 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-205ENST00000535452 CCDC8Q9H0W5 538 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-205ENST00000535452 CABP5Q9NP86 173 aa16.11■□□□□ 0.17
CLSTN3-205ENST00000535452 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-205ENST00000535452 FLT1P17948 1338 aa16.11■□□□□ 0.17
CLSTN3-205ENST00000535452 USP17L10C9JJH3 530 aa16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 ZBTB7BO15156 539 aaPredicted RBP16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 CYP2E1P05181 493 aaPredicted RBP16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 IFIT2P09913 472 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 ZAP70P43403 619 aa16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 CAP1Q01518 475 aa16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 MTMR2Q13614 643 aa16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 MTFR1Q15390 333 aa16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 AMOTL1Q8IY63 956 aa16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 BCL11AQ9H165 835 aa16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 ZBED9Q6R2W3 1325 aa16.1■□□□□ 0.17
CLSTN3-205ENST00000535452 FARP2O94887 1054 aaPredicted RBP16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 INHAP05111 366 aa16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 HABP4Q5JVS0 413 aaKnown RBP16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 TREML2Q5T2D2 321 aa16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 CCDC84Q86UT8 332 aaPredicted RBP16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 MIER1Q8N108 512 aa16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 MAGEB6Q8N7X4 407 aa16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 DDRGK1Q96HY6 314 aa16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 WDR18Q9BV38 432 aa16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 SAP30BPQ9UHR5 308 aaKnown RBP16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 DBNLQ9UJU6 430 aaKnown RBP16.09■□□□□ 0.17
CLSTN3-205ENST00000535452 GLRX3O76003 335 aaKnown RBP16.08■□□□□ 0.16
CLSTN3-205ENST00000535452 POLR3DP05423 398 aaPredicted RBP16.08■□□□□ 0.16
CLSTN3-205ENST00000535452 BACE1P56817 501 aa16.08■□□□□ 0.16
CLSTN3-205ENST00000535452 U2AF1L4Q8WU68 220 aaKnown RBP16.08■□□□□ 0.16
CLSTN3-205ENST00000535452 ASCC2Q9H1I8 757 aaPredicted RBP16.08■□□□□ 0.16
CLSTN3-205ENST00000535452 PALD1Q9ULE6 856 aa16.08■□□□□ 0.16
CLSTN3-205ENST00000535452 DDX19BQ9UMR2 479 aa16.08■□□□□ 0.16
CLSTN3-205ENST00000535452 GABRQQ9UN88 632 aa16.08■□□□□ 0.16
CLSTN3-205ENST00000535452 KIAA0100Q14667 2235 aaKnown RBP16.08■□□□□ 0.16
CLSTN3-205ENST00000535452 MAST2Q6P0Q8 1798 aa16.08■□□□□ 0.16
CLSTN3-205ENST00000535452 GDF11O95390 407 aa16.07■□□□□ 0.16
CLSTN3-205ENST00000535452 SGPL1O95470 568 aa16.07■□□□□ 0.16
CLSTN3-205ENST00000535452 CTGFP29279 349 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms