RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 PPM1HQ9ULR3 514 aa10.02□□□□□ -0.81
CCDC7-207ENST00000535327 TMEM265A0A087WTH1 108 aa10.01□□□□□ -0.81
CCDC7-207ENST00000535327 EOMESO95936 686 aa10.01□□□□□ -0.81
CCDC7-207ENST00000535327 P4HBP07237 508 aaKnown RBP10.01□□□□□ -0.81
CCDC7-207ENST00000535327 FZD5Q13467 585 aa10.01□□□□□ -0.81
CCDC7-207ENST00000535327 ZSCAN29Q8IWY8 852 aaPredicted RBP10.01□□□□□ -0.81
CCDC7-207ENST00000535327 SPACA3Q8IXA5 215 aa10.01□□□□□ -0.81
CCDC7-207ENST00000535327 SRCIN1Q9C0H9 1055 aa10.01□□□□□ -0.81
CCDC7-207ENST00000535327 USP17L7P0C7H9 530 aa10□□□□□ -0.81
CCDC7-207ENST00000535327 CDK8P49336 464 aa10□□□□□ -0.81
CCDC7-207ENST00000535327 NKPD1Q17RQ9 610 aa10□□□□□ -0.81
CCDC7-207ENST00000535327 ALG1LQ6GMV1 187 aa10□□□□□ -0.81
CCDC7-207ENST00000535327 LRFN4Q6PJG9 635 aa10□□□□□ -0.81
CCDC7-207ENST00000535327 PDZRN4Q6ZMN7 1036 aaPredicted RBP10□□□□□ -0.81
CCDC7-207ENST00000535327 C12orf49Q9H741 205 aa10□□□□□ -0.81
CCDC7-207ENST00000535327 FBRSQ9HAH7 460 aa10□□□□□ -0.81
CCDC7-207ENST00000535327 CNTNAP4Q9C0A0 1308 aa10□□□□□ -0.81
CCDC7-207ENST00000535327 JAG1P78504 1218 aa9.99□□□□□ -0.81
CCDC7-207ENST00000535327 ATG4DQ86TL0 474 aaPredicted RBP9.99□□□□□ -0.81
CCDC7-207ENST00000535327 FAM168AQ92567 244 aa9.99□□□□□ -0.81
CCDC7-207ENST00000535327 RNF19AQ9NV58 838 aa9.99□□□□□ -0.81
CCDC7-207ENST00000535327 SAMM50Q9Y512 469 aa9.99□□□□□ -0.81
CCDC7-207ENST00000535327 PRAMEF27A3QJZ7 478 aa9.98□□□□□ -0.81
CCDC7-207ENST00000535327 FANCGO15287 622 aa9.98□□□□□ -0.81
CCDC7-207ENST00000535327 ARMCX6Q7L4S7 300 aa9.98□□□□□ -0.81
CCDC7-207ENST00000535327 ELMO3Q96BJ8 720 aa9.98□□□□□ -0.81
CCDC7-207ENST00000535327 BIN1O00499 593 aa9.97□□□□□ -0.81
CCDC7-207ENST00000535327 LRRC14Q15048 493 aa9.97□□□□□ -0.81
CCDC7-207ENST00000535327 ANGEL2Q5VTE6 544 aaKnown RBP9.97□□□□□ -0.81
CCDC7-207ENST00000535327 CDC37L1Q7L3B6 337 aa9.97□□□□□ -0.81
CCDC7-207ENST00000535327 PLPPR2Q96GM1 343 aa9.97□□□□□ -0.81
CCDC7-207ENST00000535327 GTF2IRD1Q9UHL9 959 aa9.97□□□□□ -0.81
CCDC7-207ENST00000535327 PRR33A8MZF0 331 aa9.96□□□□□ -0.82
CCDC7-207ENST00000535327 IGF2BP3O00425 579 aaKnown RBP eCLIP9.96□□□□□ -0.82
CCDC7-207ENST00000535327 SLITRK5O94991 958 aa9.96□□□□□ -0.82
CCDC7-207ENST00000535327 ZNF124Q15973 351 aa9.96□□□□□ -0.82
CCDC7-207ENST00000535327 NKG7Q16617 165 aa9.96□□□□□ -0.82
CCDC7-207ENST00000535327 GAL3ST3Q96A11 431 aa9.96□□□□□ -0.82
CCDC7-207ENST00000535327 CYP8B1Q9UNU6 501 aa9.96□□□□□ -0.82
CCDC7-207ENST00000535327 SPG7Q9UQ90 795 aa9.96□□□□□ -0.82
CCDC7-207ENST00000535327 GIPC1O14908 333 aa9.95□□□□□ -0.82
CCDC7-207ENST00000535327 ATP2B2Q01814 1243 aa9.95□□□□□ -0.82
CCDC7-207ENST00000535327 IKZF1Q13422 519 aa9.95□□□□□ -0.82
CCDC7-207ENST00000535327 ERICH6Q7L0X2 663 aa9.95□□□□□ -0.82
CCDC7-207ENST00000535327 ANKRD24Q8TF21 1146 aa9.95□□□□□ -0.82
CCDC7-207ENST00000535327 FAM8A1Q9UBU6 413 aa9.95□□□□□ -0.82
CCDC7-207ENST00000535327 SNX11Q9Y5W9 270 aa9.95□□□□□ -0.82
CCDC7-207ENST00000535327 LDHBP07195 334 aaKnown RBP9.94□□□□□ -0.82
CCDC7-207ENST00000535327 SLBPQ14493 270 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCDC7-207ENST00000535327 SLC23A3Q6PIS1 610 aa9.94□□□□□ -0.82
CCDC7-207ENST00000535327 CYFIP1Q7L576 1253 aa9.94□□□□□ -0.82
CCDC7-207ENST00000535327 TTF2Q9UNY4 1162 aaKnown RBP9.94□□□□□ -0.82
CCDC7-207ENST00000535327 ZP2Q05996 745 aa9.93□□□□□ -0.82
CCDC7-207ENST00000535327 RIN3Q8TB24 985 aa9.93□□□□□ -0.82
CCDC7-207ENST00000535327 PRDM5Q9NQX1 630 aaPredicted RBP9.93□□□□□ -0.82
CCDC7-207ENST00000535327 PITPNM2Q9BZ72 1349 aa9.92□□□□□ -0.82
CCDC7-207ENST00000535327 TTBK2Q6IQ55 1244 aa9.92□□□□□ -0.82
CCDC7-207ENST00000535327 ZNF507Q8TCN5 953 aa9.92□□□□□ -0.82
CCDC7-207ENST00000535327 ASB11Q8WXH4 323 aa9.92□□□□□ -0.82
CCDC7-207ENST00000535327 PCDHB5Q9Y5E4 795 aa9.92□□□□□ -0.82
CCDC7-207ENST00000535327 GNAT3A8MTJ3 354 aa9.91□□□□□ -0.82
CCDC7-207ENST00000535327 LRIG2O94898 1065 aa9.91□□□□□ -0.82
CCDC7-207ENST00000535327 KCNA1Q09470 495 aa9.91□□□□□ -0.82
CCDC7-207ENST00000535327 WIPI1Q5MNZ9 446 aaPredicted RBP9.91□□□□□ -0.82
CCDC7-207ENST00000535327 ARID1BQ8NFD5 2236 aaPredicted RBP9.9□□□□□ -0.82
CCDC7-207ENST00000535327 SEPT6Q14141 434 aa9.9□□□□□ -0.82
CCDC7-207ENST00000535327 SV2BQ7L1I2 683 aa9.9□□□□□ -0.82
CCDC7-207ENST00000535327 HSPA12BQ96MM6 686 aa9.9□□□□□ -0.82
CCDC7-207ENST00000535327 MIPEPQ99797 713 aa9.9□□□□□ -0.82
CCDC7-207ENST00000535327 WNT10AQ9GZT5 417 aa9.9□□□□□ -0.82
CCDC7-207ENST00000535327 ATP13A1Q9HD20 1204 aa9.9□□□□□ -0.82
CCDC7-207ENST00000535327 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC7-207ENST00000535327 CDKAL1Q5VV42 579 aa9.89□□□□□ -0.83
CCDC7-207ENST00000535327 FYB2Q5VWT5 728 aa9.89□□□□□ -0.83
CCDC7-207ENST00000535327 SCARA3Q6AZY7 606 aa9.89□□□□□ -0.83
CCDC7-207ENST00000535327 HDXQ7Z353 690 aa9.89□□□□□ -0.83
CCDC7-207ENST00000535327 KCT2Q8NC54 265 aa9.89□□□□□ -0.83
CCDC7-207ENST00000535327 XAGE3Q8WTP9 111 aa9.89□□□□□ -0.83
CCDC7-207ENST00000535327 FOXQ1Q9C009 403 aa9.89□□□□□ -0.83
CCDC7-207ENST00000535327 TPX2Q9ULW0 747 aaKnown RBP9.89□□□□□ -0.83
CCDC7-207ENST00000535327 MAPK8IP1Q9UQF2 711 aa9.89□□□□□ -0.83
CCDC7-207ENST00000535327 ETF1P62495 437 aaKnown RBP9.88□□□□□ -0.83
CCDC7-207ENST00000535327 FGD1P98174 961 aa9.88□□□□□ -0.83
CCDC7-207ENST00000535327 MAP3K11Q16584 847 aa9.88□□□□□ -0.83
CCDC7-207ENST00000535327 FLAD1Q8NFF5 587 aa9.88□□□□□ -0.83
CCDC7-207ENST00000535327 TMEM40Q8WWA1 233 aa9.88□□□□□ -0.83
CCDC7-207ENST00000535327 SEMA3GQ9NS98 782 aa9.88□□□□□ -0.83
CCDC7-207ENST00000535327 CTNND2Q9UQB3 1225 aa9.88□□□□□ -0.83
CCDC7-207ENST00000535327 ZNF503-AS2A6NEH8 195 aa9.87□□□□□ -0.83
CCDC7-207ENST00000535327 GNA15P30679 374 aa9.87□□□□□ -0.83
CCDC7-207ENST00000535327 CLCN7P51798 805 aa9.87□□□□□ -0.83
CCDC7-207ENST00000535327 CARS2Q9HA77 564 aaKnown RBP9.87□□□□□ -0.83
CCDC7-207ENST00000535327 EIF4BP23588 611 aaKnown RBP9.86□□□□□ -0.83
CCDC7-207ENST00000535327 GRK4P32298 578 aa9.86□□□□□ -0.83
CCDC7-207ENST00000535327 CCDC85BQ15834 202 aaPredicted RBP9.86□□□□□ -0.83
CCDC7-207ENST00000535327 PRAMEF13Q5VWM6 474 aa9.86□□□□□ -0.83
CCDC7-207ENST00000535327 FAM155AB1AL88 458 aaPredicted RBP9.85□□□□□ -0.83
CCDC7-207ENST00000535327 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.85□□□□□ -0.83
CCDC7-207ENST00000535327 H3BS24 57 aa9.85□□□□□ -0.83
CCDC7-207ENST00000535327 FARP2O94887 1054 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms