RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 CTNND2Q9UQB3 1225 aa18.08■□□□□ 0.49
MCF2L-232ENST00000535094 CASP14P31944 242 aa18.08■□□□□ 0.48
MCF2L-232ENST00000535094 GUCY1A2P33402 732 aa18.08■□□□□ 0.48
MCF2L-232ENST00000535094 DNAJC21Q5F1R6 531 aaKnown RBP18.08■□□□□ 0.48
MCF2L-232ENST00000535094 TRIM65Q6PJ69 517 aa18.08■□□□□ 0.48
MCF2L-232ENST00000535094 TAB2Q9NYJ8 693 aa18.08■□□□□ 0.48
MCF2L-232ENST00000535094 ZMYM6O95789 1325 aa18.08■□□□□ 0.48
MCF2L-232ENST00000535094 ENC1O14682 589 aa18.08■□□□□ 0.48
MCF2L-232ENST00000535094 STX10O60499 249 aa18.08■□□□□ 0.48
MCF2L-232ENST00000535094 NOM1Q5C9Z4 860 aaKnown RBP18.08■□□□□ 0.48
MCF2L-232ENST00000535094 MRPL44Q9H9J2 332 aaKnown RBP18.08■□□□□ 0.48
MCF2L-232ENST00000535094 SLC35F6Q8N357 371 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 FAN1Q9Y2M0 1017 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 SLC4A4Q9Y6R1 1079 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 ANKRD18BA2A2Z9 1011 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 NBPF26B4DH59 902 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 ITGA6P23229 1130 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 TXLNAP40222 546 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 NBPF14Q5TI25 921 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 NBPF10Q6P3W6 841 aaKnown RBP18.07■□□□□ 0.48
MCF2L-232ENST00000535094 NBPF15Q8N660 670 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 MLKLQ8NB16 471 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 A0A0U1RQJ8 604 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 TBC1D8O95759 1140 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 EIF5P55010 431 aaKnown RBP18.07■□□□□ 0.48
MCF2L-232ENST00000535094 ATRIPQ8WXE1 791 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 EPSTI1Q96J88 318 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 CEP131Q9UPN4 1083 aa18.07■□□□□ 0.48
MCF2L-232ENST00000535094 MON2Q7Z3U7 1717 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 ERBB3P21860 1342 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 TRIM75PA6NK02 468 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 MAP3K12Q12852 859 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 RABL6Q3YEC7 729 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-232ENST00000535094 HDXQ7Z353 690 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 CSRNP2Q9H175 543 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 BRMS1Q9HCU9 246 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 WWC3Q9ULE0 1092 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 CDC25AP30304 524 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 RABGGTAQ92696 567 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 BPIFA3Q9BQP9 254 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 ADGRL3Q9HAR2 1447 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 PHKA1P46020 1223 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 CEP112Q8N8E3 955 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 CRACR2AQ9BSW2 395 aa18.06■□□□□ 0.48
MCF2L-232ENST00000535094 SYNRGQ9UMZ2 1314 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 H7C1W4 665 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 PRKAB2O43741 272 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 ZSWIM5Q9P217 1185 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 SPATA31D1Q6ZQQ2 1576 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 ERCC3P19447 782 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 CCDC93Q567U6 631 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 N4BP1O75113 896 aaKnown RBP18.05■□□□□ 0.48
MCF2L-232ENST00000535094 KRT9P35527 623 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 ABCB6Q9NP58 842 aa18.05■□□□□ 0.48
MCF2L-232ENST00000535094 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-232ENST00000535094 MCAMP43121 646 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 RESP18Q5W5W9 173 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 TC2NQ8N9U0 490 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 OXER1Q8TDS5 423 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 JADE2Q9NQC1 790 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 PPP6R2O75170 966 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 NCAPH2Q6IBW4 605 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 SMARCC1Q92922 1105 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-232ENST00000535094 PSMB7Q99436 277 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 V9GY48 417 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-232ENST00000535094 PDE6AP16499 860 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 UBXN1Q04323 297 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 CCDC148Q8NFR7 591 aa18.04■□□□□ 0.48
MCF2L-232ENST00000535094 IBSPP21815 317 aaPredicted RBP18.03■□□□□ 0.48
MCF2L-232ENST00000535094 SRGAP1Q7Z6B7 1085 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 GREM2Q9H772 168 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 MRFAP1Q9Y605 127 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 ANKARQ7Z5J8 1434 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 SALL1Q9NSC2 1324 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 SH2B2O14492 632 aaPredicted RBP18.03■□□□□ 0.48
MCF2L-232ENST00000535094 MCM7P33993 719 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 MRPS25P82663 173 aaKnown RBP18.03■□□□□ 0.48
MCF2L-232ENST00000535094 PDE4CQ08493 712 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 RILPL1Q5EBL4 403 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 PIH1D3Q9NQM4 214 aaKnown RBP18.03■□□□□ 0.48
MCF2L-232ENST00000535094 NEDD4P46934 1319 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
MCF2L-232ENST00000535094 CCDC196A0A1B0GTZ2 297 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 FAM205CA6NFA0 338 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 CTR9Q6PD62 1173 aa18.03■□□□□ 0.48
MCF2L-232ENST00000535094 NAPGQ99747 312 aaPredicted RBP18.03■□□□□ 0.48
MCF2L-232ENST00000535094 BAZ2BQ9UIF8 2168 aaKnown RBP18.03■□□□□ 0.48
MCF2L-232ENST00000535094 KANK3Q6NY19 840 aa18.02■□□□□ 0.48
MCF2L-232ENST00000535094 MAGEC2Q9UBF1 373 aaPredicted RBP18.02■□□□□ 0.48
MCF2L-232ENST00000535094 RICTORQ6R327 1708 aa18.02■□□□□ 0.48
MCF2L-232ENST00000535094 MAP3K9P80192 1104 aa18.02■□□□□ 0.48
MCF2L-232ENST00000535094 ZCRB1Q8TBF4 217 aaKnown RBP18.02■□□□□ 0.48
MCF2L-232ENST00000535094 TMEM87BQ96K49 555 aa18.02■□□□□ 0.48
MCF2L-232ENST00000535094 TUBE1Q9UJT0 475 aa18.02■□□□□ 0.48
MCF2L-232ENST00000535094 CDC23Q9UJX2 597 aa18.02■□□□□ 0.48
MCF2L-232ENST00000535094 UBN2Q6ZU65 1347 aa18.02■□□□□ 0.47
MCF2L-232ENST00000535094 TTF1Q15361 905 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms