RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 APPBP2Q92624 585 aa21.85■■□□□ 1.09
SMPD1-210ENST00000534405 RIPOR2Q9Y4F9 1068 aa21.85■■□□□ 1.09
SMPD1-210ENST00000534405 ZFYP08048 801 aaPredicted RBP21.85■■□□□ 1.09
SMPD1-210ENST00000534405 MCAMP43121 646 aa21.85■■□□□ 1.09
SMPD1-210ENST00000534405 MAP2K1Q02750 393 aaPredicted RBP21.85■■□□□ 1.09
SMPD1-210ENST00000534405 BPIFA3Q9BQP9 254 aa21.85■■□□□ 1.09
SMPD1-210ENST00000534405 HPS5Q9UPZ3 1129 aa21.85■■□□□ 1.09
SMPD1-210ENST00000534405 POTEB2H3BUK9 544 aa21.84■■□□□ 1.09
SMPD1-210ENST00000534405 KIF3CO14782 793 aa21.84■■□□□ 1.09
SMPD1-210ENST00000534405 PRC1O43663 620 aa21.84■■□□□ 1.09
SMPD1-210ENST00000534405 NKX2-3Q8TAU0 364 aa21.84■■□□□ 1.09
SMPD1-210ENST00000534405 RNF217Q8TC41 542 aa21.84■■□□□ 1.09
SMPD1-210ENST00000534405 ZNF396Q96N95 335 aaPredicted RBP21.84■■□□□ 1.09
SMPD1-210ENST00000534405 GREM2Q9H772 168 aa21.84■■□□□ 1.09
SMPD1-210ENST00000534405 RBM28Q9NW13 759 aaKnown RBP21.84■■□□□ 1.09
SMPD1-210ENST00000534405 GPAA1O43292 621 aa21.84■■□□□ 1.09
SMPD1-210ENST00000534405 MAP9Q49MG5 647 aa21.84■■□□□ 1.09
SMPD1-210ENST00000534405 TBC1D22AQ8WUA7 517 aa21.84■■□□□ 1.09
SMPD1-210ENST00000534405 DENND2AQ9ULE3 1009 aa21.84■■□□□ 1.09
SMPD1-210ENST00000534405 MAP3K15Q6ZN16 1313 aa21.83■■□□□ 1.09
SMPD1-210ENST00000534405 ERLIN1O75477 346 aa21.83■■□□□ 1.09
SMPD1-210ENST00000534405 GIGYF2Q6Y7W6 1299 aaKnown RBP21.83■■□□□ 1.09
SMPD1-210ENST00000534405 GJB4Q9NTQ9 266 aa21.83■■□□□ 1.09
SMPD1-210ENST00000534405 KLF18A0A0U1RQI7 1052 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 GOLGA6L9A6NEM1 432 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 EXOC5O00471 708 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 ITGA6P23229 1130 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 C11orf91Q3C1V1 193 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 HSP90B2PQ58FF3 399 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 METTL24Q5JXM2 366 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 TTLL11Q8NHH1 800 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 ERCC4Q92889 916 aaPredicted RBP21.82■■□□□ 1.08
SMPD1-210ENST00000534405 KIFC2Q96AC6 838 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 WDR24Q96S15 920 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 PLEKHA4Q9H4M7 779 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 AKAP11Q9UKA4 1901 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 CALRP27797 417 aaKnown RBP21.82■■□□□ 1.08
SMPD1-210ENST00000534405 ME1P48163 572 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 ATL3Q6DD88 541 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 NLRP10Q86W26 655 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 MSANTD4Q8NCY6 345 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 UTP14AQ9BVJ6 771 aaKnown RBP21.82■■□□□ 1.08
SMPD1-210ENST00000534405 NBPF3Q9H094 633 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 ANKZF1Q9H8Y5 726 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 PCDHA7Q9UN72 937 aa21.82■■□□□ 1.08
SMPD1-210ENST00000534405 PPP2R5AQ15172 486 aa21.81■■□□□ 1.08
SMPD1-210ENST00000534405 LDHAL6AQ6ZMR3 332 aa21.81■■□□□ 1.08
SMPD1-210ENST00000534405 CCDC73Q6ZRK6 1079 aa21.81■■□□□ 1.08
SMPD1-210ENST00000534405 FSIP1Q8NA03 581 aa21.81■■□□□ 1.08
SMPD1-210ENST00000534405 SLC4A9Q96Q91 983 aa21.81■■□□□ 1.08
SMPD1-210ENST00000534405 GNL3LQ9NVN8 582 aaKnown RBP21.81■■□□□ 1.08
SMPD1-210ENST00000534405 MYH7P12883 1935 aa21.81■■□□□ 1.08
SMPD1-210ENST00000534405 GOLGA8BA8MQT2 603 aa21.81■■□□□ 1.08
SMPD1-210ENST00000534405 FAM160A1Q05DH4 1040 aa21.81■■□□□ 1.08
SMPD1-210ENST00000534405 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.81■■□□□ 1.08
SMPD1-210ENST00000534405 GNG11P61952 73 aa21.8■■□□□ 1.08
SMPD1-210ENST00000534405 TEX13AQ9BXU3 409 aaPredicted RBP21.8■■□□□ 1.08
SMPD1-210ENST00000534405 FAM204AQ9H8W3 233 aa21.8■■□□□ 1.08
SMPD1-210ENST00000534405 DDX60Q8IY21 1712 aaKnown RBP21.8■■□□□ 1.08
SMPD1-210ENST00000534405 KINO60870 393 aaKnown RBP21.8■■□□□ 1.08
SMPD1-210ENST00000534405 STARD3NLO95772 234 aa21.8■■□□□ 1.08
SMPD1-210ENST00000534405 POLR3DP05423 398 aaPredicted RBP21.8■■□□□ 1.08
SMPD1-210ENST00000534405 SCP2P22307 547 aa21.8■■□□□ 1.08
SMPD1-210ENST00000534405 LIG3P49916 1009 aa21.8■■□□□ 1.08
SMPD1-210ENST00000534405 NCOA7Q8NI08 942 aa21.8■■□□□ 1.08
SMPD1-210ENST00000534405 MIEF2Q96C03 454 aa21.8■■□□□ 1.08
SMPD1-210ENST00000534405 PPP2R2CQ9Y2T4 447 aa21.8■■□□□ 1.08
SMPD1-210ENST00000534405 CLIC4Q9Y696 253 aa21.8■■□□□ 1.08
SMPD1-210ENST00000534405 CDHR2Q9BYE9 1310 aa21.8■■□□□ 1.08
SMPD1-210ENST00000534405 GBP6Q6ZN66 633 aa21.79■■□□□ 1.08
SMPD1-210ENST00000534405 VGLL2Q8N8G2 317 aa21.79■■□□□ 1.08
SMPD1-210ENST00000534405 RTEL1Q9NZ71 1219 aa21.79■■□□□ 1.08
SMPD1-210ENST00000534405 ABCC12Q96J65 1359 aa21.79■■□□□ 1.08
SMPD1-210ENST00000534405 ZNF213O14771 459 aa21.79■■□□□ 1.08
SMPD1-210ENST00000534405 CTSWP56202 376 aa21.79■■□□□ 1.08
SMPD1-210ENST00000534405 JMYQ8N9B5 988 aa21.79■■□□□ 1.08
SMPD1-210ENST00000534405 DHX58Q96C10 678 aa21.79■■□□□ 1.08
SMPD1-210ENST00000534405 C8orf76Q96K31 380 aa21.79■■□□□ 1.08
SMPD1-210ENST00000534405 MYO5AQ9Y4I1 1855 aaKnown RBP21.79■■□□□ 1.08
SMPD1-210ENST00000534405 ADD2P35612 726 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 CHMP4BP1P59074 171 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 DDR1Q08345 913 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 FBXW10Q5XX13 1052 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 SRGAP1Q7Z6B7 1085 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 FMR1NBQ8N0W7 255 aaPredicted RBP21.78■■□□□ 1.08
SMPD1-210ENST00000534405 LINC00301Q8NCQ3 95 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 GIMAP7Q8NHV1 300 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 ABCB6Q9NP58 842 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 PIH1D3Q9NQM4 214 aaKnown RBP21.78■■□□□ 1.08
SMPD1-210ENST00000534405 ITGB4P16144 1822 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 A0A1B0GVL5 298 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 CASP8Q14790 479 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 POTEDQ86YR6 584 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 CCDC102AQ96A19 550 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 ACBD3Q9H3P7 528 aa21.78■■□□□ 1.08
SMPD1-210ENST00000534405 ZNF335Q9H4Z2 1342 aaPredicted RBP21.78■■□□□ 1.08
SMPD1-210ENST00000534405 KIF28PB7ZC32 967 aa21.77■■□□□ 1.08
SMPD1-210ENST00000534405 ARHGAP6O43182 974 aa21.77■■□□□ 1.08
SMPD1-210ENST00000534405 SETQ01105 290 aaPredicted RBP21.77■■□□□ 1.08
SMPD1-210ENST00000534405 SLC9C2Q5TAH2 1124 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms