RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 TNPO2O14787 897 aaKnown RBP20.74■□□□□ 0.91
CAPRIN1-216ENST00000534042 ADCY3O60266 1144 aa20.74■□□□□ 0.91
CAPRIN1-216ENST00000534042 FLT3LGP49771 235 aa20.74■□□□□ 0.91
CAPRIN1-216ENST00000534042 SPP2Q13103 211 aa20.74■□□□□ 0.91
CAPRIN1-216ENST00000534042 DPF3Q92784 378 aa20.74■□□□□ 0.91
CAPRIN1-216ENST00000534042 PNMA3Q9UL41 463 aa20.74■□□□□ 0.91
CAPRIN1-216ENST00000534042 COL2A1P02458 1487 aaPredicted RBP20.74■□□□□ 0.91
CAPRIN1-216ENST00000534042 OS9Q13438 667 aaPredicted RBP20.73■□□□□ 0.91
CAPRIN1-216ENST00000534042 TREML2Q5T2D2 321 aa20.73■□□□□ 0.91
CAPRIN1-216ENST00000534042 ZKSCAN2Q63HK3 967 aa20.73■□□□□ 0.91
CAPRIN1-216ENST00000534042 TMEM57Q8N5G2 664 aa20.73■□□□□ 0.91
CAPRIN1-216ENST00000534042 ANKRD13CQ8N6S4 541 aa20.73■□□□□ 0.91
CAPRIN1-216ENST00000534042 PROCA1Q8NCQ7 364 aaPredicted RBP20.73■□□□□ 0.91
CAPRIN1-216ENST00000534042 ZNF280CQ8ND82 737 aa20.73■□□□□ 0.91
CAPRIN1-216ENST00000534042 TBC1D2Q9BYX2 928 aa20.73■□□□□ 0.91
CAPRIN1-216ENST00000534042 ATAD5Q96QE3 1844 aa20.73■□□□□ 0.91
CAPRIN1-216ENST00000534042 BAG3O95817 575 aa20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 CAP2P40123 477 aa20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 CCDC158Q5M9N0 1113 aa20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 TTC39AQ5SRH9 613 aa20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 NAA16Q6N069 864 aaPredicted RBP20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 SH3RF3Q8TEJ3 882 aaPredicted RBP20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 COA7Q96BR5 231 aa20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 UNC93B1Q9H1C4 597 aa20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 GPR108Q9NPR9 543 aa20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 SNRKQ9NRH2 765 aa20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 HERC5Q9UII4 1024 aaKnown RBP20.72■□□□□ 0.91
CAPRIN1-216ENST00000534042 USP17L5A8MUK1 530 aa20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 FXR1P51114 621 aaKnown RBP eCLIP20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 IRF5Q13568 498 aa20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 POLA2Q14181 598 aa20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 FAM110CQ1W6H9 321 aa20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 TNNI3KQ59H18 835 aa20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 PXYLP1Q8TE99 480 aa20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 U2AF1L4Q8WU68 220 aaKnown RBP20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 HTATIP2Q9BUP3 242 aa20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 PI4KBQ9UBF8 816 aa20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 FPGT-TNNI3KV9GXZ4 949 aa20.71■□□□□ 0.91
CAPRIN1-216ENST00000534042 ELNP15502 786 aa20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 PLCG2P16885 1265 aa20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 HMGCS2P54868 508 aa20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 ATP8B2P98198 1209 aa20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 PABPC4Q13310 644 aaKnown RBP eCLIP20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 RRP1BQ14684 758 aaKnown RBP20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 DBNDD2Q9BQY9 259 aa20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 DHX36Q9H2U1 1008 aaKnown RBP20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 AS3MTQ9HBK9 375 aa20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 AATFQ9NY61 560 aaKnown RBP eCLIP20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 TAOK2Q9UL54 1235 aa20.7■□□□□ 0.9
CAPRIN1-216ENST00000534042 SURF6O75683 361 aaKnown RBP20.69■□□□□ 0.9
CAPRIN1-216ENST00000534042 SGPL1O95470 568 aa20.69■□□□□ 0.9
CAPRIN1-216ENST00000534042 INHAP05111 366 aa20.69■□□□□ 0.9
CAPRIN1-216ENST00000534042 GCLCP48506 637 aaPredicted RBP20.69■□□□□ 0.9
CAPRIN1-216ENST00000534042 UBE2Q1Q7Z7E8 422 aa20.69■□□□□ 0.9
CAPRIN1-216ENST00000534042 SSH3Q8TE77 659 aa20.69■□□□□ 0.9
CAPRIN1-216ENST00000534042 LOC285556D6RIA3 1793 aa20.68■□□□□ 0.9
CAPRIN1-216ENST00000534042 FARP2O94887 1054 aaPredicted RBP20.68■□□□□ 0.9
CAPRIN1-216ENST00000534042 PPP4CP60510 307 aa20.68■□□□□ 0.9
CAPRIN1-216ENST00000534042 MYO5AQ9Y4I1 1855 aaKnown RBP20.68■□□□□ 0.9
CAPRIN1-216ENST00000534042 SH3D19Q5HYK7 790 aa20.67■□□□□ 0.9
CAPRIN1-216ENST00000534042 MAPKAPK5Q8IW41 473 aa20.67■□□□□ 0.9
CAPRIN1-216ENST00000534042 TGFBRAP1Q8WUH2 860 aa20.67■□□□□ 0.9
CAPRIN1-216ENST00000534042 MAST2Q6P0Q8 1798 aa20.67■□□□□ 0.9
CAPRIN1-216ENST00000534042 CDK5RAP2Q96SN8 1893 aa20.67■□□□□ 0.9
CAPRIN1-216ENST00000534042 IGSF3O75054 1194 aa20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 CYP2E1P05181 493 aaPredicted RBP20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 ASNSP08243 561 aa20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 CAPN2P17655 700 aa20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 CHRDL2Q6WN34 429 aa20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 FOXP4Q8IVH2 680 aaPredicted RBP20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 ZNF512BQ96KM6 892 aaPredicted RBP20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 TRIM34Q9BYJ4 488 aa20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 ASCC2Q9H1I8 757 aaPredicted RBP20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 C1orf115Q9H7X2 142 aa20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 NR2E3Q9Y5X4 410 aa20.66■□□□□ 0.9
CAPRIN1-216ENST00000534042 SIPA1L1O43166 1804 aa20.65■□□□□ 0.9
CAPRIN1-216ENST00000534042 TFRCP02786 760 aaKnown RBP20.65■□□□□ 0.9
CAPRIN1-216ENST00000534042 FTSJ3Q8IY81 847 aaKnown RBP20.65■□□□□ 0.9
CAPRIN1-216ENST00000534042 CRACR2BQ8N4Y2 399 aaPredicted RBP20.65■□□□□ 0.9
CAPRIN1-216ENST00000534042 DEFB118Q96PH6 123 aa20.65■□□□□ 0.9
CAPRIN1-216ENST00000534042 WDR18Q9BV38 432 aa20.65■□□□□ 0.9
CAPRIN1-216ENST00000534042 FLT1P17948 1338 aa20.64■□□□□ 0.89
CAPRIN1-216ENST00000534042 ZAP70P43403 619 aa20.64■□□□□ 0.89
CAPRIN1-216ENST00000534042 ADGRA1Q86SQ6 560 aa20.64■□□□□ 0.89
CAPRIN1-216ENST00000534042 TMOD4Q9NZQ9 345 aa20.64■□□□□ 0.89
CAPRIN1-216ENST00000534042 NOP58Q9Y2X3 529 aaKnown RBP20.64■□□□□ 0.89
CAPRIN1-216ENST00000534042 FOCADQ5VW36 1801 aa20.63■□□□□ 0.89
CAPRIN1-216ENST00000534042 BACE1P56817 501 aa20.63■□□□□ 0.89
CAPRIN1-216ENST00000534042 IRX3P78415 501 aaPredicted RBP20.63■□□□□ 0.89
CAPRIN1-216ENST00000534042 MTMR2Q13614 643 aa20.63■□□□□ 0.89
CAPRIN1-216ENST00000534042 ITPRIPQ8IWB1 547 aa20.63■□□□□ 0.89
CAPRIN1-216ENST00000534042 PIH1D3Q9NQM4 214 aaKnown RBP20.63■□□□□ 0.89
CAPRIN1-216ENST00000534042 PAK6Q9NQU5 681 aaPredicted RBP20.63■□□□□ 0.89
CAPRIN1-216ENST00000534042 PALD1Q9ULE6 856 aa20.63■□□□□ 0.89
CAPRIN1-216ENST00000534042 C19orf81C9J6K1 198 aa20.62■□□□□ 0.89
CAPRIN1-216ENST00000534042 HLA-DOAP06340 250 aa20.62■□□□□ 0.89
CAPRIN1-216ENST00000534042 CYP7A1P22680 504 aa20.62■□□□□ 0.89
CAPRIN1-216ENST00000534042 METTL16Q86W50 562 aaKnown RBP20.62■□□□□ 0.89
CAPRIN1-216ENST00000534042 CCDC8Q9H0W5 538 aaPredicted RBP20.62■□□□□ 0.89
CAPRIN1-216ENST00000534042 DNAJC18Q9H819 358 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms