RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-222	ENST00000533733	RAI14	Q9P0K7	980 aa		13.8	□□□□□ -0.2
ATM-222	ENST00000533733	PYCARD	Q9ULZ3	195 aa		13.8	□□□□□ -0.2
ATM-222	ENST00000533733	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.8	□□□□□ -0.2
ATM-222	ENST00000533733	TAF1L	Q8IZX4	1826 aa		13.79	□□□□□ -0.2
ATM-222	ENST00000533733	KANK3	Q6NY19	840 aa		13.79	□□□□□ -0.2
ATM-222	ENST00000533733	IQCA1	Q86XH1	822 aa		13.79	□□□□□ -0.2
ATM-222	ENST00000533733	ZNF654	Q8IZM8	581 aa		13.79	□□□□□ -0.2
ATM-222	ENST00000533733	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.79	□□□□□ -0.2
ATM-222	ENST00000533733	AOPEP	Q8N6M6	819 aa		13.79	□□□□□ -0.2
ATM-222	ENST00000533733	KRI1	Q8N9T8	703 aa	Known RBP	13.79	□□□□□ -0.2
ATM-222	ENST00000533733	FANCB	Q8NB91	859 aa		13.79	□□□□□ -0.2
ATM-222	ENST00000533733	PHKB	Q93100	1093 aa		13.79	□□□□□ -0.2
ATM-222	ENST00000533733	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.79	□□□□□ -0.2
ATM-222	ENST00000533733	TOMM22	Q9NS69	142 aa		13.79	□□□□□ -0.2
ATM-222	ENST00000533733	NARF	Q9UHQ1	456 aa		13.79	□□□□□ -0.2
ATM-222	ENST00000533733	LY75	O60449	1722 aa		13.79	□□□□□ -0.2
ATM-222	ENST00000533733	KIF2A	O00139	706 aa	Predicted RBP	13.78	□□□□□ -0.2
ATM-222	ENST00000533733	PPFIA3	O75145	1194 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	KCNJ6	P48051	423 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	AKAP17A	Q02040	695 aa	Known RBP	13.78	□□□□□ -0.2
ATM-222	ENST00000533733	VPS72	Q15906	364 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	ERFE	Q4G0M1	354 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	GLIPR1L2	Q4G1C9	344 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	FBXO33	Q7Z6M2	555 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	RAB11FIP4	Q86YS3	637 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	LRRC8A	Q8IWT6	810 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	CCDC150	Q8NCX0	1101 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	RIOK1	Q9BRS2	568 aa	Known RBP	13.78	□□□□□ -0.2
ATM-222	ENST00000533733	FAM13B	Q9NYF5	915 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	CBFA2T2	O43439	604 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	TOM1	O60784	492 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	RPS6KA4	O75676	772 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	WDHD1	O75717	1129 aa	Predicted RBP	13.78	□□□□□ -0.2
ATM-222	ENST00000533733	DDAH1	O94760	285 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	TUBB4A	P04350	444 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	GTF2E1	P29083	439 aa	Predicted RBP	13.78	□□□□□ -0.2
ATM-222	ENST00000533733	NBPF11	Q86T75	865 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	LINC00116	Q8NCU8	138 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	NLRP3	Q96P20	1036 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	DACH1	Q9UI36	760 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	MINPP1	Q9UNW1	487 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	PAXBP1	Q9Y5B6	917 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	TAF1	P21675	1872 aa		13.78	□□□□□ -0.2
ATM-222	ENST00000533733	PRKAB2	O43741	272 aa		13.77	□□□□□ -0.21
ATM-222	ENST00000533733	RXRA	P19793	462 aa		13.77	□□□□□ -0.21
ATM-222	ENST00000533733	SEC23A	Q15436	765 aa		13.77	□□□□□ -0.21
ATM-222	ENST00000533733	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.77	□□□□□ -0.21
ATM-222	ENST00000533733	RRP12	Q5JTH9	1297 aa	Known RBP	13.77	□□□□□ -0.21
ATM-222	ENST00000533733	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.77	□□□□□ -0.21
ATM-222	ENST00000533733	OLFM4	Q6UX06	510 aa		13.77	□□□□□ -0.21
ATM-222	ENST00000533733	CATIP	Q7Z7H3	387 aa		13.77	□□□□□ -0.21
ATM-222	ENST00000533733	DIS3L2	Q8IYB7	885 aa	Known RBP	13.77	□□□□□ -0.21
ATM-222	ENST00000533733	MPND	Q8N594	471 aa		13.77	□□□□□ -0.21
ATM-222	ENST00000533733	SENP2	Q9HC62	589 aa		13.77	□□□□□ -0.21
ATM-222	ENST00000533733	ATP8A2	Q9NTI2	1148 aa		13.77	□□□□□ -0.21
ATM-222	ENST00000533733	ABCF2	Q9UG63	623 aa		13.77	□□□□□ -0.21
ATM-222	ENST00000533733	THSD7A	Q9UPZ6	1657 aa		13.77	□□□□□ -0.21
ATM-222	ENST00000533733	ORC4	O43929	436 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	PTPRE	P23469	700 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	RPS8	P62241	208 aa	Known RBP	13.76	□□□□□ -0.21
ATM-222	ENST00000533733	SYCP1	Q15431	976 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	SHC4	Q6S5L8	630 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	TRIML1	Q8N9V2	468 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	MIGA1	Q8NAN2	632 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	CACTIN	Q8WUQ7	758 aa	Known RBP	13.76	□□□□□ -0.21
ATM-222	ENST00000533733	FAM84B	Q96KN1	310 aa	Predicted RBP	13.76	□□□□□ -0.21
ATM-222	ENST00000533733	AIFM3	Q96NN9	605 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.76	□□□□□ -0.21
ATM-222	ENST00000533733	SETDB2	Q96T68	719 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	BRMS1	Q9HCU9	246 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	MROH7-TTC4	A0A0A0MT08	1334 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	TNKS	O95271	1327 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	COL1A1	P02452	1464 aa	Predicted RBP	13.76	□□□□□ -0.21
ATM-222	ENST00000533733	SNAP23	O00161	211 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	PRPF3	O43395	683 aa	Known RBP	13.76	□□□□□ -0.21
ATM-222	ENST00000533733	MARCKS	P29966	332 aa	Predicted RBP	13.76	□□□□□ -0.21
ATM-222	ENST00000533733	DPCR1	Q3MIW9	517 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	TPTE2	Q6XPS3	522 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	KRBA2	Q6ZNG9	492 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	CERS3	Q8IU89	383 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	CCDC144CP	Q8IYA2	1237 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.76	□□□□□ -0.21
ATM-222	ENST00000533733	GJB4	Q9NTQ9	266 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.76	□□□□□ -0.21
ATM-222	ENST00000533733	KCNH3	Q9ULD8	1083 aa		13.76	□□□□□ -0.21
ATM-222	ENST00000533733	COL4A1	P02462	1669 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	MINDY4B	A8MYZ0	360 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	CCP110	O43303	1012 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	GYG1	P46976	350 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	MYL5	Q02045	173 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	SBK1	Q52WX2	424 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	CCDC178	Q5BJE1	867 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	IFIT1B	Q5T764	474 aa	Known RBP	13.75	□□□□□ -0.21
ATM-222	ENST00000533733	CNNM3	Q8NE01	707 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	NKX2-3	Q8TAU0	364 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	MYL10	Q9BUA6	226 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	NRBP1	Q9UHY1	535 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	SRPRB	Q9Y5M8	271 aa	Known RBP	13.75	□□□□□ -0.21
ATM-222	ENST00000533733	TACC3	Q9Y6A5	838 aa		13.75	□□□□□ -0.21
ATM-222	ENST00000533733	ZPR1	O75312	459 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms