RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 NBPF3Q9H094 633 aa14.27□□□□□ -0.13
CMTM1-216ENST00000533078 CRISPLD2Q9H0B8 497 aa14.27□□□□□ -0.13
CMTM1-216ENST00000533078 DDX4Q9NQI0 724 aaKnown RBP14.27□□□□□ -0.13
CMTM1-216ENST00000533078 STAP2Q9UGK3 403 aa14.27□□□□□ -0.13
CMTM1-216ENST00000533078 PA2G4Q9UQ80 394 aaKnown RBP14.27□□□□□ -0.13
CMTM1-216ENST00000533078 RPTORQ8N122 1335 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 GPR75-ASB3A0A0A6YYF3 556 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 A0A1B0GUL7 405 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 DLL1O00548 723 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 CT47B1P0C2W7 299 aaPredicted RBP14.26□□□□□ -0.13
CMTM1-216ENST00000533078 TIMM10P62072 90 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 IRX3P78415 501 aaPredicted RBP14.26□□□□□ -0.13
CMTM1-216ENST00000533078 MECOMQ03112 1051 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 C7orf61Q8IZ16 206 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 XAGE2Q96GT9 111 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 NEUROD6Q96NK8 337 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 TRIM34Q9BYJ4 488 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 TMOD4Q9NZQ9 345 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 PHIPQ8WWQ0 1821 aa14.26□□□□□ -0.13
CMTM1-216ENST00000533078 DOCK3Q8IZD9 2030 aa14.25□□□□□ -0.13
CMTM1-216ENST00000533078 USP17L5A8MUK1 530 aa14.25□□□□□ -0.13
CMTM1-216ENST00000533078 SRGAP3O43295 1099 aa14.25□□□□□ -0.13
CMTM1-216ENST00000533078 GNAI3P08754 354 aa14.25□□□□□ -0.13
CMTM1-216ENST00000533078 HMGCS2P54868 508 aa14.25□□□□□ -0.13
CMTM1-216ENST00000533078 SLFN5Q08AF3 891 aa14.25□□□□□ -0.13
CMTM1-216ENST00000533078 PDE3AQ14432 1141 aa14.25□□□□□ -0.13
CMTM1-216ENST00000533078 CCDC84Q86UT8 332 aaPredicted RBP14.25□□□□□ -0.13
CMTM1-216ENST00000533078 RAI14Q9P0K7 980 aa14.25□□□□□ -0.13
CMTM1-216ENST00000533078 HERC5Q9UII4 1024 aaKnown RBP14.25□□□□□ -0.13
CMTM1-216ENST00000533078 COL2A1P02458 1487 aaPredicted RBP14.25□□□□□ -0.13
CMTM1-216ENST00000533078 ZNF316A6NFI3 1004 aaPredicted RBP14.24□□□□□ -0.13
CMTM1-216ENST00000533078 BAG3O95817 575 aa14.24□□□□□ -0.13
CMTM1-216ENST00000533078 BMP8BP34820 402 aa14.24□□□□□ -0.13
CMTM1-216ENST00000533078 CAP2P40123 477 aa14.24□□□□□ -0.13
CMTM1-216ENST00000533078 GPR153Q6NV75 609 aa14.24□□□□□ -0.13
CMTM1-216ENST00000533078 TEX11Q8IYF3 940 aa14.24□□□□□ -0.13
CMTM1-216ENST00000533078 TRMT44Q8IYL2 757 aaKnown RBP14.24□□□□□ -0.13
CMTM1-216ENST00000533078 SOCS4Q8WXH5 440 aa14.24□□□□□ -0.13
CMTM1-216ENST00000533078 ASCC2Q9H1I8 757 aaPredicted RBP14.24□□□□□ -0.13
CMTM1-216ENST00000533078 C11orf49Q9H6J7 331 aa14.24□□□□□ -0.13
CMTM1-216ENST00000533078 CWC22Q9HCG8 908 aaKnown RBP14.24□□□□□ -0.13
CMTM1-216ENST00000533078 LRP2BPQ9P2M1 347 aa14.24□□□□□ -0.13
CMTM1-216ENST00000533078 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.24□□□□□ -0.13
CMTM1-216ENST00000533078 NOB1Q9ULX3 412 aaKnown RBP14.24□□□□□ -0.13
CMTM1-216ENST00000533078 FAM196BA6NMK8 535 aa14.23□□□□□ -0.13
CMTM1-216ENST00000533078 ASNSP08243 561 aa14.23□□□□□ -0.13
CMTM1-216ENST00000533078 PLCG2P16885 1265 aa14.23□□□□□ -0.13
CMTM1-216ENST00000533078 RHBDL3P58872 404 aa14.23□□□□□ -0.13
CMTM1-216ENST00000533078 TFCP2Q12800 502 aa14.23□□□□□ -0.13
CMTM1-216ENST00000533078 SPATA5Q8NB90 893 aa14.23□□□□□ -0.13
CMTM1-216ENST00000533078 LRCH3Q96II8 777 aa14.23□□□□□ -0.13
CMTM1-216ENST00000533078 NUDT12Q9BQG2 462 aa14.23□□□□□ -0.13
CMTM1-216ENST00000533078 DHX36Q9H2U1 1008 aaKnown RBP14.23□□□□□ -0.13
CMTM1-216ENST00000533078 PI4KBQ9UBF8 816 aa14.23□□□□□ -0.13
CMTM1-216ENST00000533078 ZMYND8Q9ULU4 1186 aaPredicted RBP14.23□□□□□ -0.13
CMTM1-216ENST00000533078 LOC285556D6RIA3 1793 aa14.23□□□□□ -0.13
CMTM1-216ENST00000533078 ATAD5Q96QE3 1844 aa14.22□□□□□ -0.13
CMTM1-216ENST00000533078 SLURP2P0DP57 97 aa14.22□□□□□ -0.13
CMTM1-216ENST00000533078 SH3D19Q5HYK7 790 aa14.22□□□□□ -0.13
CMTM1-216ENST00000533078 CRACR2BQ8N4Y2 399 aaPredicted RBP14.22□□□□□ -0.13
CMTM1-216ENST00000533078 DIS3LQ8TF46 1054 aaKnown RBP14.22□□□□□ -0.13
CMTM1-216ENST00000533078 GTF3C2Q8WUA4 911 aaPredicted RBP14.22□□□□□ -0.13
CMTM1-216ENST00000533078 NSUN4Q96CB9 384 aaKnown RBP14.22□□□□□ -0.13
CMTM1-216ENST00000533078 MEIS3Q99687 375 aa14.22□□□□□ -0.13
CMTM1-216ENST00000533078 SOX1O00570 391 aaPredicted RBP14.21□□□□□ -0.13
CMTM1-216ENST00000533078 UQCRFS1P1P0C7P4 283 aa14.21□□□□□ -0.13
CMTM1-216ENST00000533078 ZKSCAN1P17029 563 aaPredicted RBP14.21□□□□□ -0.13
CMTM1-216ENST00000533078 CYP2B6P20813 491 aa14.21□□□□□ -0.13
CMTM1-216ENST00000533078 G3BP1Q13283 466 aaKnown RBP eCLIP14.21□□□□□ -0.13
CMTM1-216ENST00000533078 MTMR2Q13614 643 aa14.21□□□□□ -0.13
CMTM1-216ENST00000533078 ATF7IPQ6VMQ6 1270 aa14.21□□□□□ -0.13
CMTM1-216ENST00000533078 GPRC5AQ8NFJ5 357 aa14.21□□□□□ -0.13
CMTM1-216ENST00000533078 GDF15Q99988 308 aa14.21□□□□□ -0.13
CMTM1-216ENST00000533078 HMG20BQ9P0W2 317 aa14.21□□□□□ -0.13
CMTM1-216ENST00000533078 MORF4L1Q9UBU8 362 aa14.21□□□□□ -0.13
CMTM1-216ENST00000533078 C19orf81C9J6K1 198 aa14.2□□□□□ -0.14
CMTM1-216ENST00000533078 XRCC5P13010 732 aaKnown RBP14.2□□□□□ -0.14
CMTM1-216ENST00000533078 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
CMTM1-216ENST00000533078 MAPK4P31152 587 aa14.2□□□□□ -0.14
CMTM1-216ENST00000533078 MNX1P50219 401 aaPredicted RBP14.2□□□□□ -0.14
CMTM1-216ENST00000533078 BACE1P56817 501 aa14.2□□□□□ -0.14
CMTM1-216ENST00000533078 TDHQ8IZJ6 230 aa14.2□□□□□ -0.14
CMTM1-216ENST00000533078 DEFB123Q8N688 67 aa14.2□□□□□ -0.14
CMTM1-216ENST00000533078 WDR18Q9BV38 432 aa14.2□□□□□ -0.14
CMTM1-216ENST00000533078 GINM1Q9NU53 330 aa14.2□□□□□ -0.14
CMTM1-216ENST00000533078 GJD2Q9UKL4 321 aa14.2□□□□□ -0.14
CMTM1-216ENST00000533078 OGDHLQ9ULD0 1010 aa14.2□□□□□ -0.14
CMTM1-216ENST00000533078 ALPK3Q96L96 1907 aa14.19□□□□□ -0.14
CMTM1-216ENST00000533078 DNAH12Q6ZR08 3092 aa14.19□□□□□ -0.14
CMTM1-216ENST00000533078 HLA-DOAP06340 250 aa14.19□□□□□ -0.14
CMTM1-216ENST00000533078 SYN1P17600 705 aa14.19□□□□□ -0.14
CMTM1-216ENST00000533078 HOXA7P31268 230 aaPredicted RBP14.19□□□□□ -0.14
CMTM1-216ENST00000533078 MAGEA10P43363 369 aaPredicted RBP14.19□□□□□ -0.14
CMTM1-216ENST00000533078 HERVK_113P62684 666 aa14.19□□□□□ -0.14
CMTM1-216ENST00000533078 LRIT3Q3SXY7 679 aa14.19□□□□□ -0.14
CMTM1-216ENST00000533078 NAA16Q6N069 864 aaPredicted RBP14.19□□□□□ -0.14
CMTM1-216ENST00000533078 TBC1D9Q6ZT07 1266 aa14.19□□□□□ -0.14
CMTM1-216ENST00000533078 UBE2OQ9C0C9 1292 aaKnown RBP14.19□□□□□ -0.14
CMTM1-216ENST00000533078 UNC80Q8N2C7 3258 aa14.19□□□□□ -0.14
CMTM1-216ENST00000533078 LAMA2P24043 3122 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms