RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 FOXP4Q8IVH2 680 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC4-212ENST00000533058 OTUD7AQ8TE49 926 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC4-212ENST00000533058 BOLA2Q9H3K6 86 aa15.67■□□□□ 0.1
TRAPPC4-212ENST00000533058 ECHDC1Q9NTX5 307 aa15.67■□□□□ 0.1
TRAPPC4-212ENST00000533058 ERC2O15083 957 aa15.66■□□□□ 0.1
TRAPPC4-212ENST00000533058 PTPRAP18433 802 aa15.66■□□□□ 0.1
TRAPPC4-212ENST00000533058 MX1P20591 662 aa15.66■□□□□ 0.1
TRAPPC4-212ENST00000533058 FAM43AQ8N2R8 423 aa15.66■□□□□ 0.1
TRAPPC4-212ENST00000533058 TGFBRAP1Q8WUH2 860 aa15.66■□□□□ 0.1
TRAPPC4-212ENST00000533058 HAUS7Q99871 368 aa15.66■□□□□ 0.1
TRAPPC4-212ENST00000533058 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRAPPC4-212ENST00000533058 FLT1P17948 1338 aa15.66■□□□□ 0.1
TRAPPC4-212ENST00000533058 GOLIM4O00461 696 aa15.65■□□□□ 0.1
TRAPPC4-212ENST00000533058 CRHR2Q13324 411 aa15.65■□□□□ 0.1
TRAPPC4-212ENST00000533058 SLC9C2Q5TAH2 1124 aa15.65■□□□□ 0.1
TRAPPC4-212ENST00000533058 RIOK1Q9BRS2 568 aaKnown RBP15.65■□□□□ 0.1
TRAPPC4-212ENST00000533058 TBC1D2Q9BYX2 928 aa15.65■□□□□ 0.1
TRAPPC4-212ENST00000533058 ZFYVE28Q9HCC9 887 aa15.65■□□□□ 0.1
TRAPPC4-212ENST00000533058 PICK1Q9NRD5 415 aa15.65■□□□□ 0.1
TRAPPC4-212ENST00000533058 PAG1Q9NWQ8 432 aa15.65■□□□□ 0.1
TRAPPC4-212ENST00000533058 AK9Q5TCS8 1911 aa15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 BTBD19C9JJ37 291 aa15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 PDE6AP16499 860 aa15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 DYNLL1P63167 89 aaKnown RBP15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 MOGSQ13724 837 aa15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 ANKRD23Q86SG2 305 aa15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 MAPKAPK5Q8IW41 473 aa15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 AFG3L2Q9Y4W6 797 aa15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 ZHX2Q9Y6X8 837 aa15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 TTC41PQ6P2S7 1318 aa15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 DOCK2Q92608 1830 aa15.64■□□□□ 0.09
TRAPPC4-212ENST00000533058 TCRBV5S4A2TA0A5A2 114 aa15.63■□□□□ 0.09
TRAPPC4-212ENST00000533058 SLURP2P0DP57 97 aa15.63■□□□□ 0.09
TRAPPC4-212ENST00000533058 CAP2P40123 477 aa15.63■□□□□ 0.09
TRAPPC4-212ENST00000533058 TAF1CQ15572 869 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC4-212ENST00000533058 MIGA1Q8NAN2 632 aa15.63■□□□□ 0.09
TRAPPC4-212ENST00000533058 GINM1Q9NU53 330 aa15.63■□□□□ 0.09
TRAPPC4-212ENST00000533058 A0A0G2JLL6 359 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 MAGEB6P1A0A0J9YX57 407 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 TLR2O60603 784 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 GLRX3O76003 335 aaKnown RBP15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 HLA-DOAP06340 250 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 ADD2P35612 726 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 PDE1AP54750 535 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 SP3Q02447 781 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 UBE3CQ15386 1083 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 FASTKD5Q7L8L6 764 aaKnown RBP15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 PRRT2Q7Z6L0 340 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 ERO1AQ96HE7 468 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 EHD4Q9H223 541 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 PALD1Q9ULE6 856 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 ZNF532Q9HCE3 1301 aa15.62■□□□□ 0.09
TRAPPC4-212ENST00000533058 MYO5AQ9Y4I1 1855 aaKnown RBP15.61■□□□□ 0.09
TRAPPC4-212ENST00000533058 USP5P45974 858 aa15.61■□□□□ 0.09
TRAPPC4-212ENST00000533058 ZSCAN25Q6NSZ9 544 aa15.61■□□□□ 0.09
TRAPPC4-212ENST00000533058 EDC3Q96F86 508 aaKnown RBP15.61■□□□□ 0.09
TRAPPC4-212ENST00000533058 TAOK2Q9UL54 1235 aa15.61■□□□□ 0.09
TRAPPC4-212ENST00000533058 SLC45A1Q9Y2W3 748 aa15.61■□□□□ 0.09
TRAPPC4-212ENST00000533058 FAM196BA6NMK8 535 aa15.6■□□□□ 0.09
TRAPPC4-212ENST00000533058 CAPN15O75808 1086 aa15.6■□□□□ 0.09
TRAPPC4-212ENST00000533058 RRP1BQ14684 758 aaKnown RBP15.6■□□□□ 0.09
TRAPPC4-212ENST00000533058 GPAT2Q6NUI2 795 aa15.6■□□□□ 0.09
TRAPPC4-212ENST00000533058 FBXO46Q6PJ61 603 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC4-212ENST00000533058 TTC6Q86TZ1 520 aa15.6■□□□□ 0.09
TRAPPC4-212ENST00000533058 PLEKHM2Q8IWE5 1019 aa15.6■□□□□ 0.09
TRAPPC4-212ENST00000533058 CRNKL1Q9BZJ0 848 aaKnown RBP15.6■□□□□ 0.09
TRAPPC4-212ENST00000533058 DNAJC18Q9H819 358 aa15.6■□□□□ 0.09
TRAPPC4-212ENST00000533058 STAP2Q9UGK3 403 aa15.6■□□□□ 0.09
TRAPPC4-212ENST00000533058 USP17L5A8MUK1 530 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 PDHXO00330 501 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 ASNSP08243 561 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 PDE4AP27815 886 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 ARHGEF6Q15052 776 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 TATDN1Q6P1N9 297 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 CRACR2BQ8N4Y2 399 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 ZNF280CQ8ND82 737 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 PI4K2BQ8TCG2 481 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 TRIM34Q9BYJ4 488 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 SERPINB13Q9UIV8 391 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 SALL3Q9BXA9 1300 aa15.59■□□□□ 0.09
TRAPPC4-212ENST00000533058 TRIM6-TRIM34B2RNG4 842 aa15.58■□□□□ 0.08
TRAPPC4-212ENST00000533058 SH3D19Q5HYK7 790 aa15.58■□□□□ 0.08
TRAPPC4-212ENST00000533058 C17orf99Q6UX52 265 aa15.58■□□□□ 0.08
TRAPPC4-212ENST00000533058 OTOP1Q7RTM1 612 aa15.58■□□□□ 0.08
TRAPPC4-212ENST00000533058 PROCA1Q8NCQ7 364 aaPredicted RBP15.58■□□□□ 0.08
TRAPPC4-212ENST00000533058 WDR18Q9BV38 432 aa15.58■□□□□ 0.08
TRAPPC4-212ENST00000533058 AS3MTQ9HBK9 375 aa15.58■□□□□ 0.08
TRAPPC4-212ENST00000533058 SAP30BPQ9UHR5 308 aaKnown RBP15.58■□□□□ 0.08
TRAPPC4-212ENST00000533058 FOCADQ5VW36 1801 aa15.58■□□□□ 0.08
TRAPPC4-212ENST00000533058 SPP2Q13103 211 aa15.57■□□□□ 0.08
TRAPPC4-212ENST00000533058 KBTBD3Q8NAB2 608 aa15.57■□□□□ 0.08
TRAPPC4-212ENST00000533058 CD99L2Q8TCZ2 262 aa15.57■□□□□ 0.08
TRAPPC4-212ENST00000533058 PARK7Q99497 189 aaKnown RBP15.57■□□□□ 0.08
TRAPPC4-212ENST00000533058 DCP1AQ9NPI6 582 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC4-212ENST00000533058 ATP8A2Q9NTI2 1148 aa15.57■□□□□ 0.08
TRAPPC4-212ENST00000533058 HPS5Q9UPZ3 1129 aa15.57■□□□□ 0.08
TRAPPC4-212ENST00000533058 TRIM17Q9Y577 477 aa15.57■□□□□ 0.08
TRAPPC4-212ENST00000533058 ADGRA2Q96PE1 1338 aa15.57■□□□□ 0.08
TRAPPC4-212ENST00000533058 DOCK1Q14185 1865 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms