RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CETPP11597 493 aa18.61■□□□□ 0.57
CPSF1-210ENST00000532935 USP5P45974 858 aa18.61■□□□□ 0.57
CPSF1-210ENST00000532935 SNAPC2Q13487 334 aa18.61■□□□□ 0.57
CPSF1-210ENST00000532935 TSHZ3Q63HK5 1081 aa18.61■□□□□ 0.57
CPSF1-210ENST00000532935 GCC1Q96CN9 775 aa18.61■□□□□ 0.57
CPSF1-210ENST00000532935 R3HDMLQ9H3Y0 253 aa18.61■□□□□ 0.57
CPSF1-210ENST00000532935 PICK1Q9NRD5 415 aa18.61■□□□□ 0.57
CPSF1-210ENST00000532935 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
CPSF1-210ENST00000532935 HERC5Q9UII4 1024 aaKnown RBP18.61■□□□□ 0.57
CPSF1-210ENST00000532935 PALD1Q9ULE6 856 aa18.61■□□□□ 0.57
CPSF1-210ENST00000532935 BAZ2AQ9UIF9 1905 aaKnown RBP18.61■□□□□ 0.57
CPSF1-210ENST00000532935 GPR25O00155 361 aa18.6■□□□□ 0.57
CPSF1-210ENST00000532935 ADD2P35612 726 aa18.6■□□□□ 0.57
CPSF1-210ENST00000532935 NOM1Q5C9Z4 860 aaKnown RBP18.6■□□□□ 0.57
CPSF1-210ENST00000532935 ANKRD45Q5TZF3 282 aa18.6■□□□□ 0.57
CPSF1-210ENST00000532935 TTC41PQ6P2S7 1318 aa18.59■□□□□ 0.57
CPSF1-210ENST00000532935 PTPRAP18433 802 aa18.59■□□□□ 0.57
CPSF1-210ENST00000532935 SLFNL1Q499Z3 407 aa18.59■□□□□ 0.57
CPSF1-210ENST00000532935 OTUD7AQ8TE49 926 aaPredicted RBP18.59■□□□□ 0.57
CPSF1-210ENST00000532935 ZNF296Q8WUU4 475 aaPredicted RBP18.59■□□□□ 0.57
CPSF1-210ENST00000532935 ZBTB47Q9UFB7 747 aaPredicted RBP18.59■□□□□ 0.57
CPSF1-210ENST00000532935 KCNH4Q9UQ05 1017 aa18.59■□□□□ 0.57
CPSF1-210ENST00000532935 HLA-DOAP06340 250 aa18.58■□□□□ 0.56
CPSF1-210ENST00000532935 CRHR2Q13324 411 aa18.58■□□□□ 0.56
CPSF1-210ENST00000532935 METTL16Q86W50 562 aaKnown RBP18.58■□□□□ 0.56
CPSF1-210ENST00000532935 FOXP4Q8IVH2 680 aaPredicted RBP18.58■□□□□ 0.56
CPSF1-210ENST00000532935 CRNKL1Q9BZJ0 848 aaKnown RBP18.58■□□□□ 0.56
CPSF1-210ENST00000532935 RWDD1Q9H446 243 aaPredicted RBP18.58■□□□□ 0.56
CPSF1-210ENST00000532935 ZHX2Q9Y6X8 837 aa18.58■□□□□ 0.56
CPSF1-210ENST00000532935 MYH8P13535 1937 aa18.58■□□□□ 0.56
CPSF1-210ENST00000532935 CHGBP05060 677 aa18.57■□□□□ 0.56
CPSF1-210ENST00000532935 RRP1BQ14684 758 aaKnown RBP18.57■□□□□ 0.56
CPSF1-210ENST00000532935 UBE3CQ15386 1083 aa18.57■□□□□ 0.56
CPSF1-210ENST00000532935 SLC4A8Q2Y0W8 1093 aa18.57■□□□□ 0.56
CPSF1-210ENST00000532935 ZSCAN25Q6NSZ9 544 aa18.57■□□□□ 0.56
CPSF1-210ENST00000532935 FAM43AQ8N2R8 423 aa18.57■□□□□ 0.56
CPSF1-210ENST00000532935 LCORLQ8N3X6 602 aa18.57■□□□□ 0.56
CPSF1-210ENST00000532935 CRACR2BQ8N4Y2 399 aaPredicted RBP18.57■□□□□ 0.56
CPSF1-210ENST00000532935 TRIM34Q9BYJ4 488 aa18.57■□□□□ 0.56
CPSF1-210ENST00000532935 DNAJC18Q9H819 358 aa18.57■□□□□ 0.56
CPSF1-210ENST00000532935 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.57■□□□□ 0.56
CPSF1-210ENST00000532935 SALL3Q9BXA9 1300 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 BTBD19C9JJ37 291 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 CXCL11O14625 94 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 ERC2O15083 957 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 MBD4O95243 580 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 MX1P20591 662 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 CAP2P40123 477 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 DGKZQ13574 1117 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 TAF1CQ15572 869 aaPredicted RBP18.56■□□□□ 0.56
CPSF1-210ENST00000532935 KBTBD3Q8NAB2 608 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 PI4K2BQ8TCG2 481 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 ARMT1Q9H993 441 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 AFG3L2Q9Y4W6 797 aa18.56■□□□□ 0.56
CPSF1-210ENST00000532935 FKTNO75072 461 aa18.55■□□□□ 0.56
CPSF1-210ENST00000532935 GLRX3O76003 335 aaKnown RBP18.55■□□□□ 0.56
CPSF1-210ENST00000532935 MCOLN1Q9GZU1 580 aa18.55■□□□□ 0.56
CPSF1-210ENST00000532935 ZCCHC17Q9NP64 241 aaKnown RBP18.55■□□□□ 0.56
CPSF1-210ENST00000532935 LOC285556D6RIA3 1793 aa18.55■□□□□ 0.56
CPSF1-210ENST00000532935 IGHDP01880 384 aa18.54■□□□□ 0.56
CPSF1-210ENST00000532935 MOGSQ13724 837 aa18.54■□□□□ 0.56
CPSF1-210ENST00000532935 CTU1Q7Z7A3 348 aaKnown RBP18.54■□□□□ 0.56
CPSF1-210ENST00000532935 TTC6Q86TZ1 520 aa18.54■□□□□ 0.56
CPSF1-210ENST00000532935 CCDC84Q86UT8 332 aaPredicted RBP18.54■□□□□ 0.56
CPSF1-210ENST00000532935 SMC5Q8IY18 1101 aa18.54■□□□□ 0.56
CPSF1-210ENST00000532935 SDR42E1Q8WUS8 393 aa18.54■□□□□ 0.56
CPSF1-210ENST00000532935 ZFYVE28Q9HCC9 887 aa18.54■□□□□ 0.56
CPSF1-210ENST00000532935 SERPINB13Q9UIV8 391 aa18.54■□□□□ 0.56
CPSF1-210ENST00000532935 A0A0G2JLL6 359 aaPredicted RBP18.53■□□□□ 0.56
CPSF1-210ENST00000532935 IRX6P78412 446 aaPredicted RBP18.53■□□□□ 0.56
CPSF1-210ENST00000532935 PRRT2Q7Z6L0 340 aaPredicted RBP18.53■□□□□ 0.56
CPSF1-210ENST00000532935 ANKRD23Q86SG2 305 aa18.53■□□□□ 0.56
CPSF1-210ENST00000532935 PUS7LQ9H0K6 701 aaKnown RBP18.53■□□□□ 0.56
CPSF1-210ENST00000532935 EHD4Q9H223 541 aa18.53■□□□□ 0.56
CPSF1-210ENST00000532935 DCP1AQ9NPI6 582 aaPredicted RBP18.53■□□□□ 0.56
CPSF1-210ENST00000532935 TRIM75PA6NK02 468 aa18.52■□□□□ 0.56
CPSF1-210ENST00000532935 USP17L5A8MUK1 530 aa18.52■□□□□ 0.56
CPSF1-210ENST00000532935 PRKAB2O43741 272 aa18.52■□□□□ 0.56
CPSF1-210ENST00000532935 POLR3DP05423 398 aaPredicted RBP18.52■□□□□ 0.56
CPSF1-210ENST00000532935 PLCD1P51178 756 aa18.52■□□□□ 0.56
CPSF1-210ENST00000532935 FASTKD5Q7L8L6 764 aaKnown RBP18.52■□□□□ 0.56
CPSF1-210ENST00000532935 ABHD8Q96I13 439 aa18.52■□□□□ 0.56
CPSF1-210ENST00000532935 TBC1D2Q9BYX2 928 aa18.52■□□□□ 0.56
CPSF1-210ENST00000532935 ATP8A2Q9NTI2 1148 aa18.52■□□□□ 0.56
CPSF1-210ENST00000532935 MCM9Q9NXL9 1143 aa18.52■□□□□ 0.56
CPSF1-210ENST00000532935 PDHXO00330 501 aa18.51■□□□□ 0.55
CPSF1-210ENST00000532935 RNF113AO15541 343 aaKnown RBP18.51■□□□□ 0.55
CPSF1-210ENST00000532935 GDF11O95390 407 aa18.51■□□□□ 0.55
CPSF1-210ENST00000532935 ZFYP08048 801 aaPredicted RBP18.51■□□□□ 0.55
CPSF1-210ENST00000532935 ASNSP08243 561 aa18.51■□□□□ 0.55
CPSF1-210ENST00000532935 JAG1P78504 1218 aa18.51■□□□□ 0.55
CPSF1-210ENST00000532935 B4GALNT3Q6L9W6 998 aa18.51■□□□□ 0.55
CPSF1-210ENST00000532935 GPAT2Q6NUI2 795 aa18.51■□□□□ 0.55
CPSF1-210ENST00000532935 ZNF280CQ8ND82 737 aa18.51■□□□□ 0.55
CPSF1-210ENST00000532935 LNPKQ9C0E8 428 aa18.51■□□□□ 0.55
CPSF1-210ENST00000532935 GINM1Q9NU53 330 aa18.51■□□□□ 0.55
CPSF1-210ENST00000532935 STAP2Q9UGK3 403 aa18.51■□□□□ 0.55
CPSF1-210ENST00000532935 TLR2O60603 784 aa18.5■□□□□ 0.55
CPSF1-210ENST00000532935 CAPN15O75808 1086 aa18.5■□□□□ 0.55
CPSF1-210ENST00000532935 PDE1AP54750 535 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms